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Gene: Trmt9b (tRNA methyltransferase 9B (putative)) Rattus norvegicus
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Symbol: Trmt9b
Name: tRNA methyltransferase 9B (putative)
Description: Predicted to have tRNA (uracil) methyltransferase activity. Predicted to be involved in tRNA wobble uridine modification. Predicted to localize to the cytoplasm and nucleus. Orthologous to human TRMT9B (tRNA methyltransferase 9B (putative)); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC306504; LOC306504; putative methyltransferase KIAA1456 homolog; RGD1304810; similar to 6430573F11Rik protein; uncharacterized protein LOC306504
Orthologs:
Homo sapiens (human) : TRMT9B (tRNA methyltransferase 9B (putative))  HGNC  Alliance
Mus musculus (house mouse) : Trmt9b (tRNA methyltransferase 9B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trmt9b (tRNA methyltransferase 9B (putative))
Pan paniscus (bonobo/pygmy chimpanzee) : TRMT9B (tRNA methyltransferase 9B (putative))
Canis lupus familiaris (dog) : TRMT9B (tRNA methyltransferase 9B (putative))
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trmt9b (tRNA methyltransferase 9B (putative))
Sus scrofa (pig) : TRMT9B (tRNA methyltransferase 9B (putative))
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01659,316,145 - 59,368,559 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1659,317,699 - 59,366,824 (-)Ensembl
Rnor_5.01658,996,816 - 59,049,222 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41659,430,147 - 59,479,272 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11659,421,489 - 59,440,004 (-)NCBI
Celera1653,800,952 - 53,850,064 (-)NCBICelera
Cytogenetic Map16q12.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trmt9b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1304810
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.