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Gene: Impg1 (interphotoreceptor matrix proteoglycan 1) Rattus norvegicus
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Symbol: Impg1
Name: interphotoreceptor matrix proteoglycan 1
RGD ID: 620499
Description: Predicted to have chondroitin sulfate binding activity; heparin binding activity; and hyaluronic acid binding activity. Predicted to be involved in visual perception. Predicted to localize to extracellular region and photoreceptor outer segment. Human ortholog(s) of this gene implicated in vitelliform macular dystrophy. Orthologous to human IMPG1 (interphotoreceptor matrix proteoglycan 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Mlgapc; mucin-like glycoprotein associated with photoreceptor cells; sialoprotein associated with cones and rods
Orthologs:
Homo sapiens (human) : IMPG1 (interphotoreceptor matrix proteoglycan 1)  HGNC  Alliance
Mus musculus (house mouse) : Impg1 (interphotoreceptor matrix proteoglycan 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Impg1 (interphotoreceptor matrix proteoglycan 1)
Pan paniscus (bonobo/pygmy chimpanzee) : IMPG1 (interphotoreceptor matrix proteoglycan 1)
Canis lupus familiaris (dog) : IMPG1 (interphotoreceptor matrix proteoglycan 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Impg1 (interphotoreceptor matrix proteoglycan 1)
Sus scrofa (pig) : IMPG1 (interphotoreceptor matrix proteoglycan 1)
Chlorocebus sabaeus (African green monkey) : IMPG1 (interphotoreceptor matrix proteoglycan 1)
Heterocephalus glaber (naked mole-rat) : Impg1 (interphotoreceptor matrix proteoglycan 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0887,733,374 - 87,879,958 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl887,733,545 - 87,879,888 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0887,271,174 - 87,416,431 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4885,372,670 - 85,523,184 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1885,392,124 - 85,513,426 (-)NCBI
Celera880,965,165 - 81,108,510 (-)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Impg1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620499
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.