Bp32 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp32 (Blood pressure QTL 32) Rattus norvegicus

Symbol: Bp32
Name: Blood pressure QTL 32
RGD ID: 61350
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: Not Available
P Value: 0.012
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21920,483,575 - 57,337,602RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01924,818,257 - 62,275,575RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01935,632,220 - 72,914,587RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41922,590,859 - 59,218,465RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.11922,595,701 - 59,223,525RGD
Cross Type: F2
Strains Crossed: BXH/Ipcv HXB/Ipcv 




  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp32Rathypertension  IDA 61044 RGD 

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp32Ratincreased systemic arterial blood pressure  QTM 61044 RGD 

Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp32Ratsystolic blood pressure  IDA 61044 RGD 

Experimental Condition
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp32Ratcontrol condition  IDA 61044 RGD 

Measurement Method
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp32Ratvascular indwelling catheter method  IDA 61044 RGD 

Rat Strain
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp32RatBXH/Ipcv  IEA 61044 RGD 
Bp32RatHXB/Ipcv  IEA 61044 RGD 

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp32Ratarterial blood pressure trait  IDA 61044 RGD 


#
Reference Title
Reference Citation
1. Novel quantitative trait loci for blood pressure and related traits on rat chromosomes 1, 10, and 18. Kovacs P, etal., Biochem Biophys Res Commun 1997 Jun 18;235(2):343-8
2. Mapping of quantitative trait loci for blood pressure and cardiac mass in the rat by genome scanning of recombinant inbred strains. Pravenec M, etal., J Clin Invest 1995 Oct;96(4):1973-8

Related QTL Description Reference
Bp46 interacts with RGD:61055



1 to 20 of 681 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1305466Lonp2lon peptidase 2, peroxisomal192040747520498985Rat
735100Abcc12ATP binding cassette subfamily C member 12192054929820621991Rat
2324816Npm1-ps18nucleophosmin 1, pseudogene 18192078548520786466Rat
41268452LOC120098533uncharacterized LOC120098533192080090120808057Rat
41214423LOC120098690small nucleolar RNA SNORA17192088486820884995Rat
620186Phkbphosphorylase kinase regulatory subunit beta192101371921210671Rat
619898Itfg1integrin alpha FG-GAP repeat containing 1192121069721331285Rat
41323917LOC120098702small nucleolar RNA SNORA17192126084921260963Rat
1305310Neto2neuropilin and tolloid like 2192134429921415524Rat
71001Dnaja2DnaJ heat shock protein family (Hsp40) member A2192149779221516904Rat
1305462Gpt2glutamic--pyruvic transaminase 2192152680021561314Rat
7714102LOC102548349uncharacterized LOC102548349192154702121554142Rat
41276456LOC120098665uncharacterized LOC120098665192158988221626464Rat
1308706C19h16orf87similar to human chromosome 16 open reading frame 87192162639021653869Rat
7642644Rps11-ps2ribosomal protein S11, pseudogene 2192167532621675840Rat
1305801Mylk3myosin light chain kinase 3192168508521743587Rat
1311437Orc6origin recognition complex, subunit 6192175786721765638Rat
1589784Vps35VPS35 retromer complex component192176577121801620Rat
41258260LOC120098671U6 spliceosomal RNA192178002821780125Rat
9272283LOC103694302mitogen-activated protein kinase 4 pseudogene192181819721820544Rat

1 to 20 of 681 rows
1 to 20 of 1029 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match
10418D19Mit6144193965437739654489Ratregion
10726D19Arb2364193754440137544765Ratregion
10727D19Wox9157193754064437540803Ratregion
33951D19Mit8132194354403943544169Ratregion
34033D19Mit5111193306179233061905Ratregion
34314D19Mgh8142194355110043551242Ratregion
34429D19Mgh3135194365634343656485Ratregion
11389D19Mgh2143193795578937955932Ratregion
11390D19Wox4192193794720737947399Ratregion
11471D19Mit9161192481604124816202Ratregion
11472D19Wox8125192481797824818103Ratregion
33597D19Mit13197192468134024681546Ratregion
33602D19Mit10183193108194131082124Ratregion
33618D19Mit7118194298351842983632Ratregion
33735D19Mit11193194737736947377562Ratregion
33741D15Mit4201192605267726052794Ratregion
36165D19Rat13227192306926523069484Ratregion
36384D19Mgh11110193673968236739793Ratregion
35376D19Rat12211192570467125704884Ratregion
35415D19Rat22129193467442834674557Ratregion
1 to 20 of 1029 rows

Peak: (D19Mit7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21942,983,518 - 42,983,632 (+)MAPPER
Rnor_6.01947,318,201 - 47,318,314NCBI
Rnor_5.01958,132,164 - 58,132,277UniSTS
RGSC_v3.41945,090,802 - 45,090,916RGD
RGSC_v3.41945,090,803 - 45,090,916UniSTS
RGSC_v3.11945,095,501 - 45,095,902RGD
Celera1942,291,103 - 42,291,216UniSTS
RH 3.4 Map19581.1UniSTS
RH 3.4 Map19581.1RGD
RH 2.0 Map19607.0RGD
SHRSP x BN Map1934.6298RGD
FHH x ACI Map1935.68RGD
Cytogenetic Map19q12UniSTS


1 to 10 of 36 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61328Eae8Experimental allergic encephalomyelitis QTL 84nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)192481604133061905Rat
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194997648153225766Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat

1 to 10 of 36 rows


Database
Acc Id
Source(s)
NCBI Gene Bp32

Note Type Note Reference