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Gene: Sf3b3 (splicing factor 3b, subunit 3) Rattus norvegicus
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Symbol: Sf3b3
Name: splicing factor 3b, subunit 3
Description: Predicted to have nucleic acid binding activity. Predicted to be involved in mRNA splicing, via spliceosome and negative regulation of protein catabolic process. Predicted to localize to the nucleus. Orthologous to human SF3B3 (splicing factor 3b subunit 3); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC292019; splicing factor 3B subunit 3
Orthologs:
Homo sapiens (human) : SF3B3 (splicing factor 3b subunit 3)  HGNC  Alliance
Mus musculus (house mouse) : Sf3b3 (splicing factor 3b, subunit 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sf3b3 (splicing factor 3b subunit 3)
Pan paniscus (bonobo/pygmy chimpanzee) : SF3B3 (splicing factor 3b subunit 3)
Canis lupus familiaris (dog) : SF3B3 (splicing factor 3b subunit 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sf3b3 (splicing factor 3b subunit 3)
Sus scrofa (pig) : SF3B3 (splicing factor 3b subunit 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01943,392,071 - 43,429,582 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01954,224,944 - 54,262,545 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41940,730,284 - 40,765,321 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11940,735,269 - 40,770,202 (-)NCBI
Celera1938,176,297 - 38,213,784 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sf3b3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311636
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.