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Gene: Cdh13 (cadherin 13) Rattus norvegicus
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Symbol: Cdh13
Name: cadherin 13
Description: Predicted to have several functions, including adiponectin binding activity; cytoskeletal protein binding activity; and low-density lipoprotein particle binding activity. Involved in mitotic cell cycle and response to organic substance. Localizes to the GABA-ergic synapse; perinuclear region of cytoplasm; and plasma membrane. Biomarker of coronary restenosis. Human ortholog(s) of this gene implicated in breast cancer (multiple); lung non-small cell carcinoma; reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human CDH13 (cadherin 13); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2-acetamidofluorene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cadherin-13; Cdht; MGC93172; T-cadherin; Tcad
Orthologs:
Homo sapiens (human) : CDH13 (cadherin 13)  HGNC  Alliance
Mus musculus (house mouse) : Cdh13 (cadherin 13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdh13 (cadherin 13)
Pan paniscus (bonobo/pygmy chimpanzee) : CDH13 (cadherin 13)
Canis lupus familiaris (dog) : CDH13 (cadherin 13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdh13 (cadherin 13)
Sus scrofa (pig) : CDH13 (cadherin 13)
more info ...
Allele / Splice: Cdh13em1Mcwi  
Genetic Models: SS-Cdh13em1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01950,848,793 - 51,971,618 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01961,621,434 - 62,245,798 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01962,345,236 - 62,720,155 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41948,507,173 - 49,575,123 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11948,512,053 - 49,580,001 (+)NCBI
Celera1945,613,369 - 46,646,704 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cdh13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619745
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.