Gene: Trir (telomerase RNA component interacting RNase) Rattus norvegicus
Analyze
Symbol: Trir
Name: telomerase RNA component interacting RNase
Description: ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-3' exonuclease activity (ortholog); INVOLVED IN RNA phosphodiester bond hydrolysis, exonucleolytic (ortholog); rRNA catabolic process (ortholog); INTERACTS WITH bisphenol A; flutamide; glafenine
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC288920; LOC288920; RGD1564093; similar to RIKEN cDNA 2310036O22; uncharacterized protein C19orf43 homolog; uncharacterized protein LOC288920
Orthologs:
Homo sapiens (human) : TRIR (telomerase RNA component interacting RNase)  HGNC  Alliance
Mus musculus (house mouse) : Trir (telomerase RNA component interacting RNase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trir (telomerase RNA component interacting RNase)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIR (telomerase RNA component interacting RNase)
Canis lupus familiaris (dog) : TRIR (telomerase RNA component interacting RNase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trir (telomerase RNA component interacting RNase)
Sus scrofa (pig) : TRIR (telomerase RNA component interacting RNase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01926,142,720 - 26,146,136 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01937,118,343 - 37,121,759 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41924,781,364 - 24,784,781 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1922,683,041 - 22,686,457 (-)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trir
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564093
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE