Exoc3l1 (exocyst complex component 3-like 1)

Gene: Exoc3l1 (exocyst complex component 3-like 1) Rattus norvegicus

Analyze

Symbol:

Exoc3l1

Name:

exocyst complex component 3-like 1

RGD ID:

1311132

Description:

Predicted to enable SNARE binding activity. Predicted to be involved in exocyst localization; exocytosis; and peptide hormone secretion. Predicted to be located in secretory granule. Predicted to be part of exocyst. Orthologous to human EXOC3L1 (exocyst complex component 3 like 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; atrazine.

Type:

protein-coding (Ensembl: pseudogene)

RefSeq Status:

PROVISIONAL

Previously known as:

Exoc3l; exocyst complex component 3-like; LOC291961; RGD1311132; similar to RIKEN cDNA E430013E20 gene

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EXOC3L1 (exocyst complex component 3 like 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Exoc3l (exocyst complex component 3-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Exoc3l1 (exocyst complex component 3 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	EXOC3L1 (exocyst complex component 3 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EXOC3L1 (exocyst complex component 3 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Exoc3l1 (exocyst complex component 3 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	EXOC3L1 (exocyst complex component 3 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	EXOC3L1 (exocyst complex component 3 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Exoc3l1 (exocyst complex component 3 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Exoc3l (exocyst complex component 3-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	EXOC3L1 (exocyst complex component 3 like 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	exoc3l1 (exocyst complex component 3-like 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SEC6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Sec6	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	sec-6	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	exoc3l1	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	50,076,761 - 50,084,278 (-)	NCBI		GRCr8
mRatBN7.2	19	33,166,836 - 33,174,371 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	33,166,837 - 33,172,486 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	39,982,441 - 39,988,090 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	40,635,760 - 40,641,409 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	42,924,667 - 42,930,324 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	37,245,269 - 37,252,789 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	37,245,270 - 37,250,919 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	48,110,991 - 48,118,508 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	35,104,614 - 35,110,263 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	35,109,531 - 35,116,033 (-)	NCBI
Celera	19	32,595,613 - 32,601,262 (-)	NCBI		Celera
Cytogenetic Map	19	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 6 (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

C60 fullerene (EXP)

chlorpyrifos (ISO)

endosulfan (EXP)

glycidol (EXP)

iron dichloride (ISO)

N-methyl-4-phenylpyridinium (ISO)

paracetamol (ISO)

pirinixic acid (ISO)

resveratrol (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sotorasib (ISO)

tetraphene (ISO)

trametinib (ISO)

trichloroethene (EXP)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

exocytosis (ISO)

peptide hormone secretion (ISO)

Cellular Component

exocyst (ISO)

secretory granule (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:18480549

Genomics

Comparative Map Data

Exoc3l1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	50,076,761 - 50,084,278 (-)	NCBI		GRCr8
mRatBN7.2	19	33,166,836 - 33,174,371 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	33,166,837 - 33,172,486 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	39,982,441 - 39,988,090 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	40,635,760 - 40,641,409 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	42,924,667 - 42,930,324 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	37,245,269 - 37,252,789 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	37,245,270 - 37,250,919 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	48,110,991 - 48,118,508 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	35,104,614 - 35,110,263 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	35,109,531 - 35,116,033 (-)	NCBI
Celera	19	32,595,613 - 32,601,262 (-)	NCBI		Celera
Cytogenetic Map	19	q11	NCBI

EXOC3L1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	67,184,379 - 67,190,136 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	67,184,379 - 67,190,185 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	67,218,282 - 67,224,039 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	65,775,783 - 65,781,608 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	16	51,726,514 - 51,732,339 (-)	NCBI		Celera
Cytogenetic Map	16	q22.1	NCBI
HuRef	16	53,091,458 - 53,097,283 (-)	NCBI		HuRef
CHM1_1	16	68,625,609 - 68,631,434 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	72,978,663 - 72,984,420 (-)	NCBI		T2T-CHM13v2.0

Exoc3l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	106,016,555 - 106,024,258 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	106,016,556 - 106,022,733 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	105,289,923 - 105,296,966 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	105,289,924 - 105,296,101 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	107,813,824 - 107,819,998 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	108,179,053 - 108,185,227 (-)	NCBI		MGSCv36	mm8
Celera	8	109,513,072 - 109,519,246 (-)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI
cM Map	8	53.04	NCBI

Exoc3l1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	9,429,683 - 9,434,982 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	9,429,578 - 9,434,982 (+)	NCBI	ChiLan1.0	ChiLan1.0

EXOC3L1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	76,714,090 - 76,721,789 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	82,626,651 - 82,634,356 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	47,528,974 - 47,536,826 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	66,918,267 - 66,924,246 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	66,918,261 - 66,924,223 (-)	Ensembl	panpan1.1		panPan2

EXOC3L1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	82,176,552 - 82,182,423 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	82,176,960 - 82,190,214 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	82,166,280 - 82,171,844 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	82,611,961 - 82,617,525 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	82,612,087 - 82,617,529 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	82,438,058 - 82,443,622 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	82,123,606 - 82,129,170 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	82,762,877 - 82,768,441 (+)	NCBI		UU_Cfam_GSD_1.0

Exoc3l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	41,925,287 - 41,932,256 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	17,656,858 - 17,662,301 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	17,656,858 - 17,662,856 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EXOC3L1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	27,827,350 - 27,832,452 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	27,827,268 - 27,832,553 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	25,116,657 - 25,121,948 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EXOC3L1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	60,266,216 - 60,272,393 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	60,266,583 - 60,272,378 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	23,017,961 - 23,024,581 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Exoc3l1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	19,127,860 - 19,133,639 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	19,128,010 - 19,133,703 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Exoc3l1
7 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	121
Count of miRNA genes:	99
Interacting mature miRNAs:	110
Transcripts:	ENSRNOT00000021015
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9590298	Uminl5	Urine mineral level QTL 5	3.59	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	19	1	36824771	Rat
8552935	Pigfal10	Plasma insulin-like growth factor 1 level QTL 10	5.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	19	1	36824771	Rat
9590250	Scort11	Serum corticosterone level QTL 11	23.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	19	1	36824771	Rat
9590090	Insglur8	Insulin/glucose ratio QTL 8	10.81	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	19	1	36824771	Rat
9589102	Slep13	Serum leptin concentration QTL 13	4.63	0.001	blood leptin amount (VT:0005667)	plasma leptin level (CMO:0000781)	19	569374	45569374	Rat
8694186	Bw152	Body weight QTL 152	3.34	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	569374	45569374	Rat
7247442	Uae39	Urinary albumin excretion QTL 39			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	2187927	46708701	Rat
724566	Uae12	Urinary albumin excretion QTL 12	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	2187927	56457239	Rat
61447	Tcas1	Tongue tumor susceptibility QTL 1	6.08		tongue integrity trait (VT:0010553)	squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)	19	2316121	47316121	Rat
2317848	Alcrsp21	Alcohol response QTL 21	1.899999976158142	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	19	3204777	48204777	Rat
1331737	Uae29	Urinary albumin excretion QTL 29	5.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	4096155	55283277	Rat
724518	Uae19	Urinary albumin excretion QTL 19	5.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	7457249	42983518	Rat
724565	Tcas5	Tongue tumor susceptibility QTL 5	10.04		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	19	9977753	39654489	Rat
61423	Cia14	Collagen induced arthritis QTL 14	3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	19	10827970	43544039	Rat
1558656	Prcs1	Prostate cancer susceptibility QTL 1	5		prostate integrity trait (VT:0010571)	percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)	19	15114598	34521833	Rat
7411549	Bw130	Body weight QTL 130	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	15455860	57337602	Rat
1331788	Rf45	Renal function QTL 45	2.818		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	19	15605023	46559041	Rat
1578764	Stresp19	Stress response QTL 19	3.6	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	19	15630201	57337602	Rat
2298478	Eau8	Experimental allergic uveoretinitis QTL 8		0.0163	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	19	17154433	57337602	Rat
61350	Bp32	Blood pressure QTL 32		0.012	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	19	20483575	57337602	Rat
1549835	Tcas7	Tongue tumor susceptibility QTL 7		0.001	tongue integrity trait (VT:0010553)	squamous cell carcinoma of the head and neck tumor number (CMO:0001876)	19	24817978	39654489	Rat
1354600	Salc2	Saline consumption QTL 2	9.91	0.001	drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	19	27530207	37947399	Rat
1354607	Gmadr1	Adrenal mass QTL 1	5.83		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	19	27530207	37947399	Rat
1354633	Bw28	Body weight QTL 28	6.04		body mass (VT:0001259)	body weight (CMO:0000012)	19	27530207	37947399	Rat
724546	Kidm3	Kidney mass QTL 3	3.1		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	19	29322490	57337602	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		8	12	6	8	6			10	14	35	11
Low	3	35	45	35	11	35	8	11	64	21	6		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006255460	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006255461	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006255463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005496632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC120484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000021015 ⟹ ENSRNOP00000021015

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	19	33,166,837 - 33,172,486 (-)	Ensembl
Rnor_6.0 Ensembl	19	37,245,270 - 37,250,919 (-)	Ensembl

RefSeq Acc Id:

NM_001106178 ⟹ NP_001099648

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,762 - 50,082,411 (-)	NCBI
mRatBN7.2	19	33,166,837 - 33,172,486 (-)	NCBI
Rnor_6.0	19	37,245,270 - 37,250,919 (-)	NCBI
Rnor_5.0	19	48,110,991 - 48,118,508 (-)	NCBI
RGSC_v3.4	19	35,104,614 - 35,110,263 (-)	RGD
Celera	19	32,595,613 - 32,601,262 (-)	RGD

Sequence:

show sequence

GAAGGGGCTTCTGGGCTGTGAAGTGGGAAAGAGGTTTCCTTGGGGAGAGGAATTTGGCTGGTGG
TGCCAAAGGAGCTAGAGTCCCTCAGGTCCCGTGAGCAGTGAGGGTGTGCCCAGTTCTGCAGGAG
AGAGAAGGCTATTCTCAAGGCCAAGGCCACTTGCAGAGGAGGGAGAACTGGACACCGGTCAGAT
CTGGCTCTCGCCCCCACTCCTACCATATCTGCAGCTTCCTGAGGCACACCATGGACTCAGCAGC
CAAGGACAAAATACAACCCAGACTTCTTCCTGGCTCTTCCTGCCCAAGGCCTGAGTGGCCAGAG
CAGGAGAGGGCTGAACAGCTGGCTCGGGGAGCGGCGCTCAAGTGGGCTTCAGGCATCTTCTACA
GGCCAGAGCAGCTGACCAGGCTGGGCCAGTACCGAAGCCGTGAAGTACAGCGTAACTATTCCTT
GGAAGCGCGAATTAAGTCAGCGGTGCAGTCATACCTGGAAGGTGTGCAGACTGGTGTGTGGCAG
CTGACTCAAGCCCTTGAGGCTGTGCAGGGAACACGAGAAGCCCTGAGACAGGCCCATCACTTAC
TCCAGGGTTTGTCTCAGACCTCACAAACCCTGGAACCCATGAGGGAATGTGTCGTCCAGCACAA
ACAACTCCAGATCCTGACTCAGTTGTTGCCAAGATTACAAGCAGTACCAGCTGCAGTGGCCCAC
ACACAGACCCTGATAGATGCTCAGCGATTCTTGGAGGCATATGTGAACCTGCGGGAGCTAGAGC
AGCTGCAAGAGGAGACATGGACACCCTTAGGAGGGCTGGAGTTGCCAATCTTCCAGGAGCTTGG
CCTTCTGGCTGAGGCTCTGGGCCAAGCCGTGGAGGCGGCTGCAGGAGCTGCAGGGCGGCTGGCC
CGTGAAGATCCAACCCTACTGGTAGCTGCTATTCGAGTGGCAGAGGTGGAGACTGAGCGCACAA
TCCTGGGACAGGCACCCCGAGACTGGCGGCAGCGATGTCTTCGGGCACTACAGGAAGGCCTGGA
GCAGCTCCACTTTGCATCGCCTGTGCTTCCTGAGCCAGGGGCCCTGTCAGGGTGGCTTGAGGCT
CTGCAGGTAGCCTTGCCTGCTGAGTTGGCAACAGCTGAAGCACTGGTGGCACCCTGCTGCCCAC
CAAGCTACCACGTGGTTCGGCTATGGGCCCACACCCTGCACAGTGGCCTGCGCCGTAGCTTGCA
GCAACTCCTTTCTGGGCCTGAGCTAGGAGCTGCTGACACCTTTGCCTTGCTGCACTGGGCGCTG
CATGTGTACATGGGGAAGGAAATGATGGGGAACTTGGAGCTGGGGCCTGAGGCCGATGTGTCCC
AGCTAGAGCCCCTCTTGACCTCAGAGAACATTGAGCAGCTGGAGGCAGCATTTGTGGCTCAGGT
CCAGGTAAGTGTGGCTCAGTGGCTAAAGAAGGCACTAGATGGGGAGGTTGCCGAATGGAGCCGG
GAACAGGAGCCCACCACAGATCCATCCGGTTTCTACCACTCACCAATGCCAGCCATTGTACTGC
AGATCCTGGCTGAAAACATTCAAGTAACCAGTCTGATTAGTGACTCATTGCATCGGCGGGTGCA
TGACATGGCAGTGTCAGAATTGGGTGCATTCTTGAGAAGTTTCAGTGACTCTCTGATCCGATTT
TCCCGAGACCATCTCAGGGGAGAAGCCGTGGCCCCTCACTATGTGCCCTACCTACTGGCTGCCT
TCAACCACCAATCAGCATTGAGATCTTCAGTCTCGGTCCTGCTGCCCGACGGGGAAACTTCCGG
GGTCTTAGCTCCAGTCGAAGCCGCTCTGGACGACGTAGAGAGGAGGATCTGCCGCCTGGTTTTG
GAAGTACTGCAGGCTGAGCTCCAGCCCCTGTTCGCCGCTCTGCCCTCGCGCCGATGGCTATTGA
GTTCCGAGTTGCTGGACAGTGTGTATGAGCAGACATTGCACTTCTGCAAGGACTTCTGGCGCGT
ACGGAAGCCTGCTGTTCAGCTGCTGCTGACGGAGACGGAACGAACCGTGGTGTTGCATTACCTC
AGGGCGCTGATGCAGGGCCGCCTAGTGTGCCGCGGTGCGGACGAGCGGAGCCAGGCGGCTGAGC
GCCTTCAGCACGATGCTGCTCAGCTTAAAGAGCTTTTCCTTGGTTTGGGCCTGGAGGAGAGCGC
TCACTGCGCGCCCGTCCTGCTCGCGCTGAGGGAACTGCTCAACCTCCACGACCCCACACTGCTT
GGCCTCGAGGTGGCAGGCCTGAGGCAACAATTTCCCGACGTGAGCGAGGATCATGTCTCTGCCC
TCTTGGACCTGCGCGGAGACGTGTCCCGAGAGCATCGTCAGGCAGCACTCAGTTCGCTGCAGGC
CGGTCCACCGCCTTCACCTTCCACCGGCCGCCGGGCACTCTTCAGCCTGGTACCGACGCCTACG
CCCTCTCTGTCCTCCTGCCTCCCCTCGGGTCCCTGCTCCTGACACCCATCTGTTTGTGTAATAA
AGCCACGTTTACCGC

hide sequence

RefSeq Acc Id:

XM_006255460 ⟹ XP_006255522

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,761 - 50,082,207 (-)	NCBI
mRatBN7.2	19	33,166,836 - 33,172,257 (-)	NCBI
Rnor_6.0	19	37,245,269 - 37,250,718 (-)	NCBI
Rnor_5.0	19	48,110,991 - 48,118,508 (-)	NCBI

Sequence:

show sequence

TCTGTACCAAACTGTTTGGGGCGTTACAGAGCAGGAAGGGGGACTTACAGTTATGCTGATTCGC
AGCCTTTCACTCGGCATCAAAAGAGGGTCAAAGGAACATCCACTCTGCCTGAGCTACTGCAGGC
TCTCGCCCCCACTCCTACCATATCTGCAGCTTCCTGAGGCACACCATGGACTCAGCAGCCAAGG
ACAAAATACAACCCAGACTTCTTCCTGGCTCTTCCTGCCCAAGGCCTGAGTGGCCAGAGCAGGA
GAGGGCTGAACAGCTGGCTCGGGGAGCGGCGCTCAAGTGGGCTTCAGGCATCTTCTACAGGCCA
GAGCAGCTGACCAGGCTGGGCCAGTACCGAAGCCGTGAAGTACAGCGTAACTATTCCTTGGAAG
CGCGAATTAAGTCAGCGGTGCAGTCATACCTGGAAGGTGTGCAGACTGGTGTGTGGCAGCTGAC
TCAAGCCCTTGAGGCTGTGCAGGGAACACGAGAAGCCCTGAGACAGGCCCATCACTTACTCCAG
GGTTTGTCTCAGACCTCACAAACCCTGGAACCCATGAGGGAATGTGTCGTCCAGCACAAACAAC
TCCAGATCCTGACTCAGTTGTTGCCAAGATTACAAGCAGTACCAGCTGCAGTGGCCCACACACA
GACCCTGATAGATGCTCAGCGATTCTTGGAGGCATATGTGAACCTGCGGGAGCTAGAGCAGCTG
CAAGAGGAGACATGGACACCCTTAGGAGGGCTGGAGTTGCCAATCTTCCAGGAGCTTGGCCTTC
TGGCTGAGGCTCTGGGCCAAGCCGTGGAGGCGGCTGCAGGAGCTGCAGGGCGGCTGGCCCGTGA
AGATCCAACCCTACTGGTAGCTGCTATTCGAGTGGCAGAGGTGGAGACTGAGCGCACAATCCTG
GGACAGGCACCCCGAGACTGGCGGCAGCGATGTCTTCGGGCACTACAGGAAGGCCTGGAGCAGC
TCCACTTTGCATCGCCTGTGCTTCCTGAGCCAGGGGCCCTGTCAGGGTGGCTTGAGGCTCTGCA
GGTAGCCTTGCCTGCTGAGTTGGCAACAGCTGAAGCACTGGTGGCACCCTGCTGCCCACCAAGC
TACCACGTGGTTCGGCTATGGGCCCACACCCTGCACAGTGGCCTGCGCCGTAGCTTGCAGCAAC
TCCTTTCTGGGCCTGAGCTAGGAGCTGCTGACACCTTTGCCTTGCTGCACTGGGCGCTGCATGT
GTACATGGGGAAGGAAATGATGGGGAACTTGGAGCTGGGGCCTGAGGCCGATGTGTCCCAGCTA
GAGCCCCTCTTGACCTCAGAGAACATTGAGCAGCTGGAGGCAGCATTTGTGGCTCAGGTCCAGG
TAAGTGTGGCTCAGTGGCTAAAGAAGGCACTAGATGGGGAGGTTGCCGAATGGAGCCGGGAACA
GGAGCCCACCACAGATCCATCCGGTTTCTACCACTCACCAATGCCAGCCATTGTACTGCAGATC
CTGGCTGAAAACATTCAAGTAACCAGTCTGATTAGTGACTCATTGCATCGGCGGGTGCATGACA
TGGCAGTGTCAGAATTGGGTGCATTCTTGAGAAGTTTCAGTGACTCTCTGATCCGATTTTCCCG
AGACCATCTCAGGGGAGAAGCCGTGGCCCCTCACTATGTGCCCTACCTACTGGCTGCCTTCAAC
CACCAATCAGCATTGAGATCTTCAGTCTCGGTCCTGCTGCCCGACGGGGAAACTTCCGGGGTCT
TAGCTCCAGTCGAAGCCGCTCTGGACGACGTAGAGAGGAGGATCTGCCGCCTGGTTTTGGAAGT
ACTGCAGGCTGAGCTCCAGCCCCTGTTCGCCGCTCTGCCCTCGCGCCGATGGCTATTGAGTTCC
GAGTTGCTGGACAGTGTGTATGAGCAGACATTGCACTTCTGCAAGGACTTCTGGCGCGTACGGA
AGCCTGCTGTTCAGCTGCTGCTGACGGAGACGGAACGAACCGTGGTGTTGCATTACCTCAGGGC
GCTGATGCAGGGCCGCCTAGTGTGCCGCGGTGCGGACGAGCGGAGCCAGGCGGCTGAGCGCCTT
CAGCACGATGCTGCTCAGCTTAAAGAGCTTTTCCTTGGTTTGGGCCTGGAGGAGAGCGCTCACT
GCGCGCCCGTCCTGCTCGCGCTGAGGGAACTGCTCAACCTCCACGACCCCACACTGCTTGGCCT
CGAGGTGGCAGGCCTGAGGCAACAATTTCCCGACGTGAGCGAGGATCATGTCTCTGCCCTCTTG
GACCTGCGCGGAGACGTGTCCCGAGAGCATCGTCAGGCAGCACTCAGTTCGCTGCAGGCCGGTC
CACCGCCTTCACCTTCCACCGGCCGCCGGGCACTCTTCAGCCTGGTACCGACGCCTACGCCCTC
TCTGTCCTCCTGCCTCCCCTCGGGTCCCTGCTCCTGACACCCATCTGTTTGTGTAATAAAGCCA
CGTTTACCGCA

hide sequence

RefSeq Acc Id:

XM_006255461 ⟹ XP_006255523

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,761 - 50,082,217 (-)	NCBI
mRatBN7.2	19	33,166,836 - 33,172,287 (-)	NCBI
Rnor_6.0	19	37,245,269 - 37,250,718 (-)	NCBI
Rnor_5.0	19	48,110,991 - 48,118,508 (-)	NCBI

Sequence:

show sequence

TCTGTACCAAACTGTTTGGGGCGTTACAGAGCAGGAAGGGGGACTTACAGTTATGCTGATTCGC
AGCCTTTCACTCGGCATCAAAAGAGGTAGAACCCATAACCCCAGAGGACCCCATATCCCAGGGT
CAAAGGAACATCCACTCTGCCTGAGCTACTGCAGGCTCTCGCCCCCACTCCTACCATATCTGCA
GCTTCCTGAGGCACACCATGGACTCAGCAGCCAAGGACAAAATACAACCCAGACTTCTTCCTGG
CTCTTCCTGCCCAAGGCCTGAGTGGCCAGAGCAGGAGAGGGCTGAACAGCTGGCTCGGGGAGCG
GCGCTCAAGTGGGCTTCAGGCATCTTCTACAGGCCAGAGCAGCTGACCAGGCTGGGCCAGTACC
GAAGCCGTGAAGTACAGCGTAACTATTCCTTGGAAGCGCGAATTAAGTCAGCGGTGCAGTCATA
CCTGGAAGGTGTGCAGACTGGTGTGTGGCAGCTGACTCAAGCCCTTGAGGCTGTGCAGGGAACA
CGAGAAGCCCTGAGACAGGCCCATCACTTACTCCAGGGTTTGTCTCAGACCTCACAAACCCTGG
AACCCATGAGGGAATGTGTCGTCCAGCACAAACAACTCCAGATCCTGACTCAGTTGTTGCCAAG
ATTACAAGCAGTACCAGCTGCAGTGGCCCACACACAGACCCTGATAGATGCTCAGCGATTCTTG
GAGGCATATGTGAACCTGCGGGAGCTAGAGCAGCTGCAAGAGGAGACATGGACACCCTTAGGAG
GGCTGGAGTTGCCAATCTTCCAGGAGCTTGGCCTTCTGGCTGAGGCTCTGGGCCAAGCCGTGGA
GGCGGCTGCAGGAGCTGCAGGGCGGCTGGCCCGTGAAGATCCAACCCTACTGGTAGCTGCTATT
CGAGTGGCAGAGGTGGAGACTGAGCGCACAATCCTGGGACAGGCACCCCGAGACTGGCGGCAGC
GATGTCTTCGGGCACTACAGGAAGGCCTGGAGCAGCTCCACTTTGCATCGCCTGTGCTTCCTGA
GCCAGGGGCCCTGTCAGGGTGGCTTGAGGCTCTGCAGGTAGCCTTGCCTGCTGAGTTGGCAACA
GCTGAAGCACTGGTGGCACCCTGCTGCCCACCAAGCTACCACGTGGTTCGGCTATGGGCCCACA
CCCTGCACAGTGGCCTGCGCCGTAGCTTGCAGCAACTCCTTTCTGGGCCTGAGCTAGGAGCTGC
TGACACCTTTGCCTTGCTGCACTGGGCGCTGCATGTGTACATGGGGAAGGAAATGATGGGGAAC
TTGGAGCTGGGGCCTGAGGCCGATGTGTCCCAGCTAGAGCCCCTCTTGACCTCAGAGAACATTG
AGCAGCTGGAGGCAGCATTTGTGGCTCAGGTCCAGGTAAGTGTGGCTCAGTGGCTAAAGAAGGC
ACTAGATGGGGAGGTTGCCGAATGGAGCCGGGAACAGGAGCCCACCACAGATCCATCCGGTTTC
TACCACTCACCAATGCCAGCCATTGTACTGCAGATCCTGGCTGAAAACATTCAAGTAACCAGTC
TGATTAGTGACTCATTGCATCGGCGGGTGCATGACATGGCAGTGTCAGAATTGGGTGCATTCTT
GAGAAGTTTCAGTGACTCTCTGATCCGATTTTCCCGAGACCATCTCAGGGGAGAAGCCGTGGCC
CCTCACTATGTGCCCTACCTACTGGCTGCCTTCAACCACCAATCAGCATTGAGATCTTCAGTCT
CGGTCCTGCTGCCCGACGGGGAAACTTCCGGGGTCTTAGCTCCAGTCGAAGCCGCTCTGGACGA
CGTAGAGAGGAGGATCTGCCGCCTGGTTTTGGAAGTACTGCAGGCTGAGCTCCAGCCCCTGTTC
GCCGCTCTGCCCTCGCGCCGATGGCTATTGAGTTCCGAGTTGCTGGACAGTGTGTATGAGCAGA
CATTGCACTTCTGCAAGGACTTCTGGCGCGTACGGAAGCCTGCTGTTCAGCTGCTGCTGACGGA
GACGGAACGAACCGTGGTGTTGCATTACCTCAGGGCGCTGATGCAGGGCCGCCTAGTGTGCCGC
GGTGCGGACGAGCGGAGCCAGGCGGCTGAGCGCCTTCAGCACGATGCTGCTCAGCTTAAAGAGC
TTTTCCTTGGTTTGGGCCTGGAGGAGAGCGCTCACTGCGCGCCCGTCCTGCTCGCGCTGAGGGA
ACTGCTCAACCTCCACGACCCCACACTGCTTGGCCTCGAGGTGGCAGGCCTGAGGCAACAATTT
CCCGACGTGAGCGAGGATCATGTCTCTGCCCTCTTGGACCTGCGCGGAGACGTGTCCCGAGAGC
ATCGTCAGGCAGCACTCAGTTCGCTGCAGGCCGGTCCACCGCCTTCACCTTCCACCGGCCGCCG
GGCACTCTTCAGCCTGGTACCGACGCCTACGCCCTCTCTGTCCTCCTGCCTCCCCTCGGGTCCC
TGCTCCTGACACCCATCTGTTTGTGTAATAAAGCCACGTTTACCGCA

hide sequence

RefSeq Acc Id:

XM_017601219 ⟹ XP_017456708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,761 - 50,084,278 (-)	NCBI
mRatBN7.2	19	33,166,836 - 33,174,364 (-)	NCBI
Rnor_6.0	19	37,245,269 - 37,252,757 (-)	NCBI

Sequence:

show sequence

CGCAAAATTTTGGGGACCATTGACAAATGTACCATTTGCAAAGGAAACGAAAACAACTCCTCAG
GACAGCTAAGAAACCTGAAAAATTGTATCGTAGGAAATGGAGGAGTTCTTTGCAGCTACTCCAA
CACTTGGGGGTCATCCTTCAAACCAGCTTGAGGCTAAGTCAGCTTTATGTGTGCATATGTGTTT
CCTGAGCACTTAGAAGTCAAGGGTCAAAGGAACATCCACTCTGCCTGAGCTACTGCAGGCTCTC
GCCCCCACTCCTACCATATCTGCAGCTTCCTGAGGCACACCATGGACTCAGCAGCCAAGGACAA
AATACAACCCAGACTTCTTCCTGGCTCTTCCTGCCCAAGGCCTGAGTGGCCAGAGCAGGAGAGG
GCTGAACAGCTGGCTCGGGGAGCGGCGCTCAAGTGGGCTTCAGGCATCTTCTACAGGCCAGAGC
AGCTGACCAGGCTGGGCCAGTACCGAAGCCGTGAAGTACAGCGTAACTATTCCTTGGAAGCGCG
AATTAAGTCAGCGGTGCAGTCATACCTGGAAGGTGTGCAGACTGGTGTGTGGCAGCTGACTCAA
GCCCTTGAGGCTGTGCAGGGAACACGAGAAGCCCTGAGACAGGCCCATCACTTACTCCAGGGTT
TGTCTCAGACCTCACAAACCCTGGAACCCATGAGGGAATGTGTCGTCCAGCACAAACAACTCCA
GATCCTGACTCAGTTGTTGCCAAGATTACAAGCAGTACCAGCTGCAGTGGCCCACACACAGACC
CTGATAGATGCTCAGCGATTCTTGGAGGCATATGTGAACCTGCGGGAGCTAGAGCAGCTGCAAG
AGGAGACATGGACACCCTTAGGAGGGCTGGAGTTGCCAATCTTCCAGGAGCTTGGCCTTCTGGC
TGAGGCTCTGGGCCAAGCCGTGGAGGCGGCTGCAGGAGCTGCAGGGCGGCTGGCCCGTGAAGAT
CCAACCCTACTGGTAGCTGCTATTCGAGTGGCAGAGGTGGAGACTGAGCGCACAATCCTGGGAC
AGGCACCCCGAGACTGGCGGCAGCGATGTCTTCGGGCACTACAGGAAGGCCTGGAGCAGCTCCA
CTTTGCATCGCCTGTGCTTCCTGAGCCAGGGGCCCTGTCAGGGTGGCTTGAGGCTCTGCAGGTA
GCCTTGCCTGCTGAGTTGGCAACAGCTGAAGCACTGGTGGCACCCTGCTGCCCACCAAGCTACC
ACGTGGTTCGGCTATGGGCCCACACCCTGCACAGTGGCCTGCGCCGTAGCTTGCAGCAACTCCT
TTCTGGGCCTGAGCTAGGAGCTGCTGACACCTTTGCCTTGCTGCACTGGGCGCTGCATGTGTAC
ATGGGGAAGGAAATGATGGGGAACTTGGAGCTGGGGCCTGAGGCCGATGTGTCCCAGCTAGAGC
CCCTCTTGACCTCAGAGAACATTGAGCAGCTGGAGGCAGCATTTGTGGCTCAGGTCCAGGTAAG
TGTGGCTCAGTGGCTAAAGAAGGCACTAGATGGGGAGGTTGCCGAATGGAGCCGGGAACAGGAG
CCCACCACAGATCCATCCGGTTTCTACCACTCACCAATGCCAGCCATTGTACTGCAGATCCTGG
CTGAAAACATTCAAGTAACCAGTCTGATTAGTGACTCATTGCATCGGCGGGTGCATGACATGGC
AGTGTCAGAATTGGGTGCATTCTTGAGAAGTTTCAGTGACTCTCTGATCCGATTTTCCCGAGAC
CATCTCAGGGGAGAAGCCGTGGCCCCTCACTATGTGCCCTACCTACTGGCTGCCTTCAACCACC
AATCAGCATTGAGATCTTCAGTCTCGGTCCTGCTGCCCGACGGGGAAACTTCCGGGGTCTTAGC
TCCAGTCGAAGCCGCTCTGGACGACGTAGAGAGGAGGATCTGCCGCCTGGTTTTGGAAGTACTG
CAGGCTGAGCTCCAGCCCCTGTTCGCCGCTCTGCCCTCGCGCCGATGGCTATTGAGTTCCGAGT
TGCTGGACAGTGTGTATGAGCAGACATTGCACTTCTGCAAGGACTTCTGGCGCGTACGGAAGCC
TGCTGTTCAGCTGCTGCTGACGGAGACGGAACGAACCGTGGTGTTGCATTACCTCAGGGCGCTG
ATGCAGGGCCGCCTAGTGTGCCGCGGTGCGGACGAGCGGAGCCAGGCGGCTGAGCGCCTTCAGC
ACGATGCTGCTCAGCTTAAAGAGCTTTTCCTTGGTTTGGGCCTGGAGGAGAGCGCTCACTGCGC
GCCCGTCCTGCTCGCGCTGAGGGAACTGCTCAACCTCCACGACCCCACACTGCTTGGCCTCGAG
GTGGCAGGCCTGAGGCAACAATTTCCCGACGTGAGCGAGGATCATGTCTCTGCCCTCTTGGACC
TGCGCGGAGACGTGTCCCGAGAGCATCGTCAGGCAGCACTCAGTTCGCTGCAGGCCGGTCCACC
GCCTTCACCTTCCACCGGCCGCCGGGCACTCTTCAGCCTGGTACCGACGCCTACGCCCTCTCTG
TCCTCCTGCCTCCCCTCGGGTCCCTGCTCCTGACACCCATCTGTTTGTGTAATAAAGCCACGTT
TACCGCA

hide sequence

RefSeq Acc Id:

XM_017601222 ⟹ XP_017456711

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,761 - 50,084,278 (-)	NCBI
mRatBN7.2	19	33,166,836 - 33,174,360 (-)	NCBI
Rnor_6.0	19	37,245,269 - 37,252,789 (-)	NCBI

Sequence:

show sequence

TATCTGGTGCAATTCCTATCTGTAGATCTTGACGCAAAATTTTGGGGACCATTGACAAATGTAC
CATTTGCAAAGGAAACGAAAACAACTCCTCAGGACAGCTAAGAAACCTGAAAAATTGTATCGTA
GGAAATGGAGGAGGGTCAAAGGAACATCCACTCTGCCTGAGCTACTGCAGGCTCTCGCCCCCAC
TCCTACCATATCTGCAGCTTCCTGAGGCACACCATGGACTCAGCAGCCAAGGACAAAATACAAC
CCAGACTTCTTCCTGGCTCTTCCTGCCCAAGGCCTGAGTGGCCAGAGCAGGAGAGGGCTGAACA
GCTGGCTCGGGGAGCGGCGCTCAAGTGGGCTTCAGGCATCTTCTACAGGCCAGAGCAGCTGACC
AGGCTGGGCCAGTACCGAAGCCGTGAAGTACAGCGTAACTATTCCTTGGAAGCGCGAATTAAGT
CAGCGGTGCAGTCATACCTGGAAGGTGTGCAGACTGGTGTGTGGCAGCTGACTCAAGCCCTTGA
GGCTGTGCAGGGAACACGAGAAGCCCTGAGACAGGCCCATCACTTACTCCAGGGTTTGTCTCAG
ACCTCACAAACCCTGGAACCCATGAGGGAATGTGTCGTCCAGCACAAACAACTCCAGATCCTGA
CTCAGTTGTTGCCAAGATTACAAGCAGTACCAGCTGCAGTGGCCCACACACAGACCCTGATAGA
TGCTCAGCGATTCTTGGAGGCATATGTGAACCTGCGGGAGCTAGAGCAGCTGCAAGAGGAGACA
TGGACACCCTTAGGAGGGCTGGAGTTGCCAATCTTCCAGGAGCTTGGCCTTCTGGCTGAGGCTC
TGGGCCAAGCCGTGGAGGCGGCTGCAGGAGCTGCAGGGCGGCTGGCCCGTGAAGATCCAACCCT
ACTGGTAGCTGCTATTCGAGTGGCAGAGGTGGAGACTGAGCGCACAATCCTGGGACAGGCACCC
CGAGACTGGCGGCAGCGATGTCTTCGGGCACTACAGGAAGGCCTGGAGCAGCTCCACTTTGCAT
CGCCTGTGCTTCCTGAGCCAGGGGCCCTGTCAGGGTGGCTTGAGGCTCTGCAGGTAGCCTTGCC
TGCTGAGTTGGCAACAGCTGAAGCACTGGTGGCACCCTGCTGCCCACCAAGCTACCACGTGGTT
CGGCTATGGGCCCACACCCTGCACAGTGGCCTGCGCCGTAGCTTGCAGCAACTCCTTTCTGGGC
CTGAGCTAGGAGCTGCTGACACCTTTGCCTTGCTGCACTGGGCGCTGCATGTGTACATGGGGAA
GGAAATGATGGGGAACTTGGAGCTGGGGCCTGAGGCCGATGTGTCCCAGCTAGAGCCCCTCTTG
ACCTCAGAGAACATTGAGCAGCTGGAGGCAGCATTTGTGGCTCAGGTCCAGGTAAGTGTGGCTC
AGTGGCTAAAGAAGGCACTAGATGGGGAGGTTGCCGAATGGAGCCGGGAACAGGAGCCCACCAC
AGATCCATCCGGTTTCTACCACTCACCAATGCCAGCCATTGTACTGCAGATCCTGGCTGAAAAC
ATTCAAGTAACCAGTCTGATTAGTGACTCATTGCATCGGCGGGTGCATGACATGGCAGTGTCAG
AATTGGGTGCATTCTTGAGAAGTTTCAGTGACTCTCTGATCCGATTTTCCCGAGACCATCTCAG
GGGAGAAGCCGTGGCCCCTCACTATGTGCCCTACCTACTGGCTGCCTTCAACCACCAATCAGCA
TTGAGATCTTCAGTCTCGGTCCTGCTGCCCGACGGGGAAACTTCCGGGGTCTTAGCTCCAGTCG
AAGCCGCTCTGGACGACGTAGAGAGGAGGATCTGCCGCCTGGTTTTGGAAGTACTGCAGGCTGA
GCTCCAGCCCCTGTTCGCCGCTCTGCCCTCGCGCCGATGGCTATTGAGTTCCGAGTTGCTGGAC
AGTGTGTATGAGCAGACATTGCACTTCTGCAAGGACTTCTGGCGCGTACGGAAGCCTGCTGTTC
AGCTGCTGCTGACGGAGACGGAACGAACCGTGGTGTTGCATTACCTCAGGGCGCTGATGCAGGG
CCGCCTAGTGTGCCGCGGTGCGGACGAGCGGAGCCAGGCGGCTGAGCGCCTTCAGCACGATGCT
GCTCAGCTTAAAGAGCTTTTCCTTGGTTTGGGCCTGGAGGAGAGCGCTCACTGCGCGCCCGTCC
TGCTCGCGCTGAGGGAACTGCTCAACCTCCACGACCCCACACTGCTTGGCCTCGAGGTGGCAGG
CCTGAGGCAACAATTTCCCGACGTGAGCGAGGATCATGTCTCTGCCCTCTTGGACCTGCGCGGA
GACGTGTCCCGAGAGCATCGTCAGGCAGCACTCAGTTCGCTGCAGGCCGGTCCACCGCCTTCAC
CTTCCACCGGCCGCCGGGCACTCTTCAGCCTGGTACCGACGCCTACGCCCTCTCTGTCCTCCTG
CCTCCCCTCGGGTCCCTGCTCCTGACACCCATCTGTTTGTGTAATAAAGCCACGTTTACCGCA

hide sequence

RefSeq Acc Id:

XM_017601223 ⟹ XP_017456712

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,761 - 50,082,566 (-)	NCBI
mRatBN7.2	19	33,166,836 - 33,174,364 (-)	NCBI
Rnor_6.0	19	37,245,269 - 37,251,086 (-)	NCBI

Sequence:

show sequence

TGGTCAAGACTTGGTGATCACGGGGAGTCCACGGCTGCCCCCACCCAACAGGAAGTAGCGCCCA
GCTCTCCCCACCTCAGTGCAGTTGCTTTTCCTGTTGGGAATAAAGTGCCAGAGACTCAACTTCC
TTCCTTTCTGCTTTGAAGAGGGAGGGGCCTTGAGGGGAAGAAGGGGCTTCTGGGCTGTGAAGTG
GGAAAGAGGTTTCCTTGGGGAGAGGAATTTGGCTGGTGGTGCCAAAGGAGCTAGAGTCCCTCAG
GTCCCGTGAGCAGTGAGGGTGTGCCCAGTTCTGCAGGAGAGAGAAGGCTATTCTCAAGGCCAAG
GCCACTTGCAGAGGAGGGAGAACTGGACACCGGTCAGATCTGGGTCAAAGGAACATCCACTCTG
CCTGAGCTACTGCAGGCTCTCGCCCCCACTCCTACCATATCTGCAGCTTCCTGAGGCACACCAT
GGACTCAGCAGCCAAGGACAAAATACAACCCAGACTTCTTCCTGGCTCTTCCTGCCCAAGGCCT
GAGTGGCCAGAGCAGGAGAGGGCTGAACAGCTGGCTCGGGGAGCGGCGCTCAAGTGGGCTTCAG
GCATCTTCTACAGGCCAGAGCAGCTGACCAGGCTGGGCCAGTACCGAAGCCGTGAAGTACAGCG
TAACTATTCCTTGGAAGCGCGAATTAAGGGTTTGTCTCAGACCTCACAAACCCTGGAACCCATG
AGGGAATGTGTCGTCCAGCACAAACAACTCCAGATCCTGACTCAGTTGTTGCCAAGATTACAAG
CAGTACCAGCTGCAGTGGCCCACACACAGACCCTGATAGATGCTCAGCGATTCTTGGAGGCATA
TGTGAACCTGCGGGAGCTAGAGCAGCTGCAAGAGGAGACATGGACACCCTTAGGAGGGCTGGAG
TTGCCAATCTTCCAGGAGCTTGGCCTTCTGGCTGAGGCTCTGGGCCAAGCCGTGGAGGCGGCTG
CAGGAGCTGCAGGGCGGCTGGCCCGTGAAGATCCAACCCTACTGGTAGCTGCTATTCGAGTGGC
AGAGGTGGAGACTGAGCGCACAATCCTGGGACAGGCACCCCGAGACTGGCGGCAGCGATGTCTT
CGGGCACTACAGGAAGGCCTGGAGCAGCTCCACTTTGCATCGCCTGTGCTTCCTGAGCCAGGGG
CCCTGTCAGGGTGGCTTGAGGCTCTGCAGGTAGCCTTGCCTGCTGAGTTGGCAACAGCTGAAGC
ACTGGTGGCACCCTGCTGCCCACCAAGCTACCACGTGGTTCGGCTATGGGCCCACACCCTGCAC
AGTGGCCTGCGCCGTAGCTTGCAGCAACTCCTTTCTGGGCCTGAGCTAGGAGCTGCTGACACCT
TTGCCTTGCTGCACTGGGCGCTGCATGTGTACATGGGGAAGGAAATGATGGGGAACTTGGAGCT
GGGGCCTGAGGCCGATGTGTCCCAGCTAGAGCCCCTCTTGACCTCAGAGAACATTGAGCAGCTG
GAGGCAGCATTTGTGGCTCAGGTCCAGGTAAGTGTGGCTCAGTGGCTAAAGAAGGCACTAGATG
GGGAGGTTGCCGAATGGAGCCGGGAACAGGAGCCCACCACAGATCCATCCGGTTTCTACCACTC
ACCAATGCCAGCCATTGTACTGCAGATCCTGGCTGAAAACATTCAAGTAACCAGTCTGATTAGT
GACTCATTGCATCGGCGGGTGCATGACATGGCAGTGTCAGAATTGGGTGCATTCTTGAGAAGTT
TCAGTGACTCTCTGATCCGATTTTCCCGAGACCATCTCAGGGGAGAAGCCGTGGCCCCTCACTA
TGTGCCCTACCTACTGGCTGCCTTCAACCACCAATCAGCATTGAGATCTTCAGTCTCGGTCCTG
CTGCCCGACGGGGAAACTTCCGGGGTCTTAGCTCCAGTCGAAGCCGCTCTGGACGACGTAGAGA
GGAGGATCTGCCGCCTGGTTTTGGAAGTACTGCAGGCTGAGCTCCAGCCCCTGTTCGCCGCTCT
GCCCTCGCGCCGATGGCTATTGAGTTCCGAGTTGCTGGACAGTGTGTATGAGCAGACATTGCAC
TTCTGCAAGGACTTCTGGCGCGTACGGAAGCCTGCTGTTCAGCTGCTGCTGACGGAGACGGAAC
GAACCGTGGTGTTGCATTACCTCAGGGCGCTGATGCAGGGCCGCCTAGTGTGCCGCGGTGCGGA
CGAGCGGAGCCAGGCGGCTGAGCGCCTTCAGCACGATGCTGCTCAGCTTAAAGAGCTTTTCCTT
GGTTTGGGCCTGGAGGAGAGCGCTCACTGCGCGCCCGTCCTGCTCGCGCTGAGGGAACTGCTCA
ACCTCCACGACCCCACACTGCTTGGCCTCGAGGTGGCAGGCCTGAGGCAACAATTTCCCGACGT
GAGCGAGGATCATGTCTCTGCCCTCTTGGACCTGCGCGGAGACGTGTCCCGAGAGCATCGTCAG
GCAGCACTCAGTTCGCTGCAGGCCGGTCCACCGCCTTCACCTTCCACCGGCCGCCGGGCACTCT
TCAGCCTGGTACCGACGCCTACGCCCTCTCTGTCCTCCTGCCTCCCCTCGGGTCCCTGCTCCTG
ACACCCATCTGTTTGTGTAATAAAGCCACGTTTACCGCA

hide sequence

RefSeq Acc Id:

XM_063277909 ⟹ XP_063133979

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,761 - 50,082,565 (-)	NCBI

RefSeq Acc Id:

XM_063277910 ⟹ XP_063133980

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,761 - 50,083,008 (-)	NCBI

RefSeq Acc Id:

XM_063277911 ⟹ XP_063133981

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,076,761 - 50,082,561 (-)	NCBI

RefSeq Acc Id:

XR_005496632

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	50,077,859 - 50,082,571 (-)	NCBI
mRatBN7.2	19	33,167,939 - 33,174,370 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001099648	(Get FASTA)	NCBI Sequence Viewer
	XP_006255522	(Get FASTA)	NCBI Sequence Viewer
	XP_006255523	(Get FASTA)	NCBI Sequence Viewer
	XP_017456708	(Get FASTA)	NCBI Sequence Viewer
	XP_017456711	(Get FASTA)	NCBI Sequence Viewer
	XP_017456712	(Get FASTA)	NCBI Sequence Viewer
	XP_063133979	(Get FASTA)	NCBI Sequence Viewer
	XP_063133980	(Get FASTA)	NCBI Sequence Viewer
	XP_063133981	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL92363	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001099648 ⟸ NM_001106178

- UniProtKB:

A6IYN5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDSAAKDKIQPRLLPGSSCPRPEWPEQERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREVQ
RNYSLEARIKSAVQSYLEGVQTGVWQLTQALEAVQGTREALRQAHHLLQGLSQTSQTLEPMREC
VVQHKQLQILTQLLPRLQAVPAAVAHTQTLIDAQRFLEAYVNLRELEQLQEETWTPLGGLELPI
FQELGLLAEALGQAVEAAAGAAGRLAREDPTLLVAAIRVAEVETERTILGQAPRDWRQRCLRAL
QEGLEQLHFASPVLPEPGALSGWLEALQVALPAELATAEALVAPCCPPSYHVVRLWAHTLHSGL
RRSLQQLLSGPELGAADTFALLHWALHVYMGKEMMGNLELGPEADVSQLEPLLTSENIEQLEAA
FVAQVQVSVAQWLKKALDGEVAEWSREQEPTTDPSGFYHSPMPAIVLQILAENIQVTSLISDSL
HRRVHDMAVSELGAFLRSFSDSLIRFSRDHLRGEAVAPHYVPYLLAAFNHQSALRSSVSVLLPD
GETSGVLAPVEAALDDVERRICRLVLEVLQAELQPLFAALPSRRWLLSSELLDSVYEQTLHFCK
DFWRVRKPAVQLLLTETERTVVLHYLRALMQGRLVCRGADERSQAAERLQHDAAQLKELFLGLG
LEESAHCAPVLLALRELLNLHDPTLLGLEVAGLRQQFPDVSEDHVSALLDLRGDVSREHRQAAL
SSLQAGPPPSPSTGRRALFSLVPTPTPSLSSCLPSGPCS

hide sequence

RefSeq Acc Id:	XP_006255522 ⟸ XM_006255460
- Peptide Label:	isoform X1
- UniProtKB:	A6IYN5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDSAAKDKIQPRLLPGSSCPRPEWPEQERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREVQ RNYSLEARIKSAVQSYLEGVQTGVWQLTQALEAVQGTREALRQAHHLLQGLSQTSQTLEPMREC VVQHKQLQILTQLLPRLQAVPAAVAHTQTLIDAQRFLEAYVNLRELEQLQEETWTPLGGLELPI FQELGLLAEALGQAVEAAAGAAGRLAREDPTLLVAAIRVAEVETERTILGQAPRDWRQRCLRAL QEGLEQLHFASPVLPEPGALSGWLEALQVALPAELATAEALVAPCCPPSYHVVRLWAHTLHSGL RRSLQQLLSGPELGAADTFALLHWALHVYMGKEMMGNLELGPEADVSQLEPLLTSENIEQLEAA FVAQVQVSVAQWLKKALDGEVAEWSREQEPTTDPSGFYHSPMPAIVLQILAENIQVTSLISDSL HRRVHDMAVSELGAFLRSFSDSLIRFSRDHLRGEAVAPHYVPYLLAAFNHQSALRSSVSVLLPD GETSGVLAPVEAALDDVERRICRLVLEVLQAELQPLFAALPSRRWLLSSELLDSVYEQTLHFCK DFWRVRKPAVQLLLTETERTVVLHYLRALMQGRLVCRGADERSQAAERLQHDAAQLKELFLGLG LEESAHCAPVLLALRELLNLHDPTLLGLEVAGLRQQFPDVSEDHVSALLDLRGDVSREHRQAAL SSLQAGPPPSPSTGRRALFSLVPTPTPSLSSCLPSGPCS hide sequence

RefSeq Acc Id:	XP_006255523 ⟸ XM_006255461
- Peptide Label:	isoform X1
- UniProtKB:	A6IYN5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDSAAKDKIQPRLLPGSSCPRPEWPEQERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREVQ RNYSLEARIKSAVQSYLEGVQTGVWQLTQALEAVQGTREALRQAHHLLQGLSQTSQTLEPMREC VVQHKQLQILTQLLPRLQAVPAAVAHTQTLIDAQRFLEAYVNLRELEQLQEETWTPLGGLELPI FQELGLLAEALGQAVEAAAGAAGRLAREDPTLLVAAIRVAEVETERTILGQAPRDWRQRCLRAL QEGLEQLHFASPVLPEPGALSGWLEALQVALPAELATAEALVAPCCPPSYHVVRLWAHTLHSGL RRSLQQLLSGPELGAADTFALLHWALHVYMGKEMMGNLELGPEADVSQLEPLLTSENIEQLEAA FVAQVQVSVAQWLKKALDGEVAEWSREQEPTTDPSGFYHSPMPAIVLQILAENIQVTSLISDSL HRRVHDMAVSELGAFLRSFSDSLIRFSRDHLRGEAVAPHYVPYLLAAFNHQSALRSSVSVLLPD GETSGVLAPVEAALDDVERRICRLVLEVLQAELQPLFAALPSRRWLLSSELLDSVYEQTLHFCK DFWRVRKPAVQLLLTETERTVVLHYLRALMQGRLVCRGADERSQAAERLQHDAAQLKELFLGLG LEESAHCAPVLLALRELLNLHDPTLLGLEVAGLRQQFPDVSEDHVSALLDLRGDVSREHRQAAL SSLQAGPPPSPSTGRRALFSLVPTPTPSLSSCLPSGPCS hide sequence

RefSeq Acc Id:	XP_017456711 ⟸ XM_017601222
- Peptide Label:	isoform X1
- UniProtKB:	A6IYN5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDSAAKDKIQPRLLPGSSCPRPEWPEQERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREVQ RNYSLEARIKSAVQSYLEGVQTGVWQLTQALEAVQGTREALRQAHHLLQGLSQTSQTLEPMREC VVQHKQLQILTQLLPRLQAVPAAVAHTQTLIDAQRFLEAYVNLRELEQLQEETWTPLGGLELPI FQELGLLAEALGQAVEAAAGAAGRLAREDPTLLVAAIRVAEVETERTILGQAPRDWRQRCLRAL QEGLEQLHFASPVLPEPGALSGWLEALQVALPAELATAEALVAPCCPPSYHVVRLWAHTLHSGL RRSLQQLLSGPELGAADTFALLHWALHVYMGKEMMGNLELGPEADVSQLEPLLTSENIEQLEAA FVAQVQVSVAQWLKKALDGEVAEWSREQEPTTDPSGFYHSPMPAIVLQILAENIQVTSLISDSL HRRVHDMAVSELGAFLRSFSDSLIRFSRDHLRGEAVAPHYVPYLLAAFNHQSALRSSVSVLLPD GETSGVLAPVEAALDDVERRICRLVLEVLQAELQPLFAALPSRRWLLSSELLDSVYEQTLHFCK DFWRVRKPAVQLLLTETERTVVLHYLRALMQGRLVCRGADERSQAAERLQHDAAQLKELFLGLG LEESAHCAPVLLALRELLNLHDPTLLGLEVAGLRQQFPDVSEDHVSALLDLRGDVSREHRQAAL SSLQAGPPPSPSTGRRALFSLVPTPTPSLSSCLPSGPCS hide sequence

RefSeq Acc Id:	XP_017456708 ⟸ XM_017601219
- Peptide Label:	isoform X1
- UniProtKB:	A6IYN5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDSAAKDKIQPRLLPGSSCPRPEWPEQERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREVQ RNYSLEARIKSAVQSYLEGVQTGVWQLTQALEAVQGTREALRQAHHLLQGLSQTSQTLEPMREC VVQHKQLQILTQLLPRLQAVPAAVAHTQTLIDAQRFLEAYVNLRELEQLQEETWTPLGGLELPI FQELGLLAEALGQAVEAAAGAAGRLAREDPTLLVAAIRVAEVETERTILGQAPRDWRQRCLRAL QEGLEQLHFASPVLPEPGALSGWLEALQVALPAELATAEALVAPCCPPSYHVVRLWAHTLHSGL RRSLQQLLSGPELGAADTFALLHWALHVYMGKEMMGNLELGPEADVSQLEPLLTSENIEQLEAA FVAQVQVSVAQWLKKALDGEVAEWSREQEPTTDPSGFYHSPMPAIVLQILAENIQVTSLISDSL HRRVHDMAVSELGAFLRSFSDSLIRFSRDHLRGEAVAPHYVPYLLAAFNHQSALRSSVSVLLPD GETSGVLAPVEAALDDVERRICRLVLEVLQAELQPLFAALPSRRWLLSSELLDSVYEQTLHFCK DFWRVRKPAVQLLLTETERTVVLHYLRALMQGRLVCRGADERSQAAERLQHDAAQLKELFLGLG LEESAHCAPVLLALRELLNLHDPTLLGLEVAGLRQQFPDVSEDHVSALLDLRGDVSREHRQAAL SSLQAGPPPSPSTGRRALFSLVPTPTPSLSSCLPSGPCS hide sequence

RefSeq Acc Id:

XP_017456712 ⟸ XM_017601223

- Peptide Label:

isoform X2

- Sequence:

show sequence

MDSAAKDKIQPRLLPGSSCPRPEWPEQERAEQLARGAALKWASGIFYRPEQLTRLGQYRSREVQ
RNYSLEARIKGLSQTSQTLEPMRECVVQHKQLQILTQLLPRLQAVPAAVAHTQTLIDAQRFLEA
YVNLRELEQLQEETWTPLGGLELPIFQELGLLAEALGQAVEAAAGAAGRLAREDPTLLVAAIRV
AEVETERTILGQAPRDWRQRCLRALQEGLEQLHFASPVLPEPGALSGWLEALQVALPAELATAE
ALVAPCCPPSYHVVRLWAHTLHSGLRRSLQQLLSGPELGAADTFALLHWALHVYMGKEMMGNLE
LGPEADVSQLEPLLTSENIEQLEAAFVAQVQVSVAQWLKKALDGEVAEWSREQEPTTDPSGFYH
SPMPAIVLQILAENIQVTSLISDSLHRRVHDMAVSELGAFLRSFSDSLIRFSRDHLRGEAVAPH
YVPYLLAAFNHQSALRSSVSVLLPDGETSGVLAPVEAALDDVERRICRLVLEVLQAELQPLFAA
LPSRRWLLSSELLDSVYEQTLHFCKDFWRVRKPAVQLLLTETERTVVLHYLRALMQGRLVCRGA
DERSQAAERLQHDAAQLKELFLGLGLEESAHCAPVLLALRELLNLHDPTLLGLEVAGLRQQFPD
VSEDHVSALLDLRGDVSREHRQAALSSLQAGPPPSPSTGRRALFSLVPTPTPSLSSCLPSGPCS

hide sequence

RefSeq Acc Id:

ENSRNOP00000021015 ⟸ ENSRNOT00000021015

RefSeq Acc Id:	XP_063133980 ⟸ XM_063277910
- Peptide Label:	isoform X1
- UniProtKB:	A6IYN5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063133979 ⟸ XM_063277909
- Peptide Label:	isoform X1
- UniProtKB:	A6IYN5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063133981 ⟸ XM_063277911
- Peptide Label:	isoform X3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AC37-F1-model_v2	AlphaFold	D4AC37	1-743	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311132	AgrOrtholog
BioCyc Gene	G2FUF-5845	BioCyc
Ensembl Genes	ENSRNOG00000015641	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000021015	ENTREZGENE
Gene3D-CATH	1.10.357.50	UniProtKB/TrEMBL
	Exocyst complex component Sec6, C-terminal domain	UniProtKB/TrEMBL
InterPro	EXOC3/Sec6	UniProtKB/TrEMBL
	EXOC3/Sec6_C	UniProtKB/TrEMBL
KEGG Report	rno:291961	UniProtKB/TrEMBL
NCBI Gene	291961	ENTREZGENE
PANTHER	EXOCYST COMPLEX COMPONENT 3-LIKE PROTEIN	UniProtKB/TrEMBL
	EXOCYST COMPLEX COMPONENT SEC6-RELATED	UniProtKB/TrEMBL
Pfam	Sec6	UniProtKB/TrEMBL
PhenoGen	Exoc3l1	PhenoGen
RatGTEx	ENSRNOG00000015641	RatGTEx
UniProt	A6IYN5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-02	Exoc3l1	exocyst complex component 3-like 1	Exoc3l	exocyst complex component 3-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-27	Exoc3l	exocyst complex component 3-like	RGD1311132_predicted	similar to RIKEN cDNA E430013E20 gene (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1311132_predicted	similar to RIKEN cDNA E430013E20 gene (predicted)	LOC291961_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC291961_predicted	similar to RIKEN cDNA E430013E20 gene (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar