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Gene: Chst4 (carbohydrate sulfotransferase 4) Rattus norvegicus
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Symbol: Chst4
Name: carbohydrate sulfotransferase 4
Description: Predicted to have N-acetylglucosamine 6-O-sulfotransferase activity. Predicted to be involved in several processes, including keratan sulfate biosynthetic process; leukocyte tethering or rolling; and protein sulfation. Predicted to localize to the trans-Golgi network. Orthologous to human CHST4 (carbohydrate sulfotransferase 4); PARTICIPATES IN keratan sulfate biosynthetic pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: carbohydrate (chondroitin 6/keratan) sulfotransferase 4; carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4; LOC307838
Orthologs:
Homo sapiens (human) : CHST4 (carbohydrate sulfotransferase 4)  HGNC  Alliance
Mus musculus (house mouse) : Chst4 (carbohydrate sulfotransferase 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chst4 (carbohydrate sulfotransferase 4)
Pan paniscus (bonobo/pygmy chimpanzee) : CHST4 (carbohydrate sulfotransferase 4)
Canis lupus familiaris (dog) : CHST4 (carbohydrate sulfotransferase 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chst4 (carbohydrate sulfotransferase 4)
Sus scrofa (pig) : CHST4 (carbohydrate sulfotransferase 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01941,630,060 - 41,642,373 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1941,631,715 - 41,640,367 (+)Ensembl
Rnor_5.01952,453,925 - 52,465,993 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41939,900,812 - 39,909,464 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11939,906,652 - 39,907,819 (-)NCBI
Celera1937,396,998 - 37,405,591 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Chst4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310798
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.