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Gene: RGD621098 (similar to RIKEN cDNA D230025D16Rik) Rattus norvegicus
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Symbol: RGD621098
Name: similar to RIKEN cDNA D230025D16Rik
Description: Exhibits PDZ domain binding activity and glutamate receptor binding activity. Involved in Golgi to plasma membrane protein transport. Localizes to the dendrite; synaptic vesicle membrane; and trans-Golgi network. Orthologous to human C16orf70 (chromosome 16 open reading frame 70); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Lin-10; lin-10 homolog; lin-10 homolog (C. elegans); lin-10 protein homolog; lin-10 protein homolog (C. elegans); Lin10; UPF0183 protein C16orf70 homolog
Orthologs:
Homo sapiens (human) : C16orf70 (chromosome 16 open reading frame 70)  HGNC  Alliance
Mus musculus (house mouse) : D230025D16Rik (RIKEN cDNA D230025D16 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102016597 (chromosome unknown open reading frame, human C16orf70)
Pan paniscus (bonobo/pygmy chimpanzee) : C16H16orf70 (chromosome 16 C16orf70 homolog)
Canis lupus familiaris (dog) : C5H16orf70 (chromosome 5 C16orf70 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH16orf70 (chromosome unknown C16orf70 homolog)
Sus scrofa (pig) : C6H16orf70 (chromosome 6 C16orf70 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01937,179,850 - 37,207,714 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01948,045,949 - 48,074,039 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41935,038,531 - 35,066,395 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11935,043,411 - 35,071,276 (+)NCBI
Celera1932,530,706 - 32,558,571 (+)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on RGD621098
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621098
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.