BE105999 Marker Search Result - Rat Genome Database
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Summary
References - curated
Strains and Sequence
Sequence
Region
Genes in Region
Nucleotide Sequences
QTLs in Region (GRCr8)
Additional Information
External Database Links
General
Marker: BE105999
Symbol:
BE105999
Previously known as:
RGD ID:
5061714
Expected Size:
165 (bp)
Position
Rat Assembly
Chr
Position (strand)
Source
JBrowse
mRatBN7.2
19
50,950,632 - 50,950,797 (+)
MAPPER
mRatBN7.2
Rnor_6.0
19
55,714,180 - 55,714,344
NCBI
Rnor6.0
Rnor_5.0
19
66,420,210 - 66,420,374
UniSTS
Rnor5.0
RGSC_v3.4
19
53,218,973 - 53,219,137
UniSTS
RGSC3.4
Celera
19
50,188,030 - 50,188,194
UniSTS
RH 3.4 Map
19
707.51
UniSTS
Cytogenetic Map
19
q12
UniSTS
Is Marker For:
Genes:
Ankrd11
Annotation
References - curated
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#
Reference Title
Reference Citation
1.
UniSTS Pipeline
RGD automated pipelines
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Strains and Sequence
Sequence
Forward Primer
CAGCTCCTCTGTCCTTCCTCTT
Reverse Primer
AGACTGGAGAGACCGGTGACAG
Region
Genes in Region
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The following
Genes
overlap with this region.
Full Report
CSV
TAB
Printer
Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1306679
Ankrd11
ankyrin repeat domain containing 11
19
50940284
51098962
Rat
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Nucleotide Sequences
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RefSeq Transcripts
XM_003751889.1
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
XM_003751890.1
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
XM_003753115.1
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
XM_003753116.1
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
GenBank Nucleotide
FQ225542
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
FQ232426
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
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QTLs in Region (GRCr8)
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The following
QTLs
overlap with this region.
Full Report
CSV
TAB
Printer
Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2313395
Anxrr26
Anxiety related response QTL 26
aggression-related behavior trait (VT:0015014)
tameness/aggressiveness composite score (CMO:0002136)
19
49976481
53225766
Rat
1578764
Stresp19
Stress response QTL 19
3.6
0.001
blood renin amount (VT:0003349)
plasma renin activity level (CMO:0000116)
19
15630201
57337602
Rat
61350
Bp32
Blood pressure QTL 32
0.012
arterial blood pressure trait (VT:2000000)
systolic blood pressure (CMO:0000004)
19
20483575
57337602
Rat
5135224
Leukc1
Leukocyte quantity QTL 1
eosinophil quantity (VT:0002602)
blood eosinophil count (CMO:0000033)
19
44340214
55283277
Rat
724546
Kidm3
Kidney mass QTL 3
3.1
kidney mass (VT:0002707)
calculated kidney weight (CMO:0000160)
19
29322490
57337602
Rat
7411549
Bw130
Body weight QTL 130
5
0.001
body mass (VT:0001259)
body weight gain (CMO:0000420)
19
15455860
57337602
Rat
1358200
Insglur2
Insulin/glucose ratio QTL 2
4.1
blood glucose amount (VT:0000188)
serum glucose level (CMO:0000543)
19
33838214
55283146
Rat
724566
Uae12
Urinary albumin excretion QTL 12
5
urine albumin amount (VT:0002871)
urine albumin level (CMO:0000130)
19
2187927
56457239
Rat
1331737
Uae29
Urinary albumin excretion QTL 29
5.5
urine albumin amount (VT:0002871)
urine albumin level (CMO:0000130)
19
4096155
55283277
Rat
2298478
Eau8
Experimental allergic uveoretinitis QTL 8
0.0163
uvea integrity trait (VT:0010551)
experimental autoimmune uveitis score (CMO:0001504)
19
17154433
57337602
Rat
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Additional Information
External Database Links
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Database
Acc Id
Source(s)
NCBI Gene
365023
UniSTS
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