Leukc1 QTL Report (Rattus norvegicus) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
QTL Registration

QTL: Leukc1 (Leukocyte quantity QTL 1) Rattus norvegicus

Symbol: Leukc1
Name: Leukocyte quantity QTL 1
RGD ID: 5135224
Previously known as: eosinophilia 1; eos1
Trait: eosinophil quantity   (VT:0002602)    
Measurement Type: blood eosinophil count   (CMO:0000033)    
LOD Score: LRS: 16.4
P Value: Not Available
Variance: Not Available
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21944,340,214 - 55,283,277RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01948,830,712 - 60,220,581RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01959,631,471 - 70,892,142RGDRnor5.0
RGSC_v3.41912,235,101 - 57,235,101RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: ACI/NSlc MES/Slc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Irf8 is a candidate Gene for Leukc1
Zfpm1 is a candidate Gene for Leukc1

Disease Annotations     Click to see Annotation Detail View
Eosinophilia  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
ACI/NSlc  (IEA)
MES/Slc  (IEA)

References

References - curated
# Reference Title Reference Citation
1. A locus for eosinophilia in the MES rat is on Chromosome 19. Li G, etal., Mamm Genome. 2005 Jul;16(7):516-23.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41374924LOC120098592uncharacterized LOC120098592194441346444419495Rat
1306930Dynlrb2dynein light chain roadblock-type 2194452013444531384Rat
1309548Cdyl2chromodomain Y-like 2194459173444783258Rat
2324599Cmc2C-x(9)-C motif containing 2194494328344971930Rat
1310953Cenpncentromere protein N194497126544994019Rat
1305781AtminATM interactor194499650645013606Rat
1586501C19h16orf46similar to human chromosome 16 open reading frame 46194501749945033453Rat
619946Gcshglycine cleavage system protein H194503601345046770Rat
1588631Pkd1l2polycystin 1 like 2194504971345136503Rat
70981Bco1beta-carotene oxygenase 1194514925045186102Rat
1307766Gangigaxonin194520778345265066Rat
41179725Trnas-aga23transfer RNA serine (anticodon AGA) 23194528018545280278Rat
1306101Cmipc-Maf-inducing protein194530459745510653Rat
41383128Lsm7l1LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated like 1194530542245320865Rat
7688675LOC102548350uncharacterized LOC102548350194541211745413732Rat
41291636LOC120098622uncharacterized LOC120098622194541328445419789Rat
3348Plcg2phospholipase C, gamma 2194554741645683930Rat
1308481Sdr42e1short chain dehydrogenase/reductase family 42E, member 1194571536645727901Rat
41034518LOC120098492uncharacterized LOC120098492194572459145737212Rat
621803Hsd17b2hydroxysteroid (17-beta) dehydrogenase 2194575357645825203Rat
1591222Mphosph6M phase phosphoprotein 6194586015245870117Rat
41357379LOC120098686small nucleolar RNA SNORA51194618435146184483Rat
619745Cdh13cadherin 13194634956247387462Rat
41187403LOC120098661uncharacterized LOC120098661194661121146624842Rat
41209110LOC120098662uncharacterized LOC120098662194671702146724445Rat
41017738LOC120098700small nucleolar RNA SNORA17194679557746795708Rat
628632Hsbp1heat shock factor binding protein 1194740103947405373Rat
620234Mlycdmalonyl-CoA decarboxylase194744793147463794Rat
41000024LOC120098609uncharacterized LOC120098609194746816747469434Rat
620679Osgin1oxidative stress induced growth inhibitor 1194747175047500517Rat
621844Necab2N-terminal EF-hand calcium binding protein 2194750135147527722Rat
1560237Slc38a8solute carrier family 38, member 8194752278147561443Rat
70935Mbtps1membrane-bound transcription factor peptidase, site 1194756159847612769Rat
1308433Hsdl1hydroxysteroid dehydrogenase like 1194761579447631892Rat
1310542Dnaaf1dynein, axonemal, assembly factor 1194762453447652314Rat
7599081Ndufa2-ps3NADH:ubiquinone oxidoreductase subunit A2, pseudogene 3194764138147642187Rat
1305658Taf1cTATA-box binding protein associated factor, RNA polymerase 1 subunit C194765245147658971Rat
1586236Adad2adenosine deaminase domain containing 2194766528847669433Rat
1308553Kcng4potassium voltage-gated channel modifier subfamily G member 4194767730747689410Rat
68938Wfdc1WAP four-disulfide core domain 1194772019147739121Rat
41175675Trnaa-agc94transfer RNA alanine (anticodon AGC) 94194775102647751098Rat
620647Atp2c2ATPase secretory pathway Ca2+ transporting 2194775412047811369Rat
7727982LOC102549202uncharacterized LOC102549202194777280147778184Rat
1308461Meak7MTOR associated protein, eak-7 homolog194781389947836830Rat
1305498Cotl1coactosin-like F-actin binding protein 1194787168947906010Rat
41343333LOC120098610uncharacterized LOC120098610194790608047909029Rat
9363365LOC10369434740S ribosomal protein S25 pseudogene194791995847920912Rat
1561366Klhl36kelch-like family member 36194792159047942627Rat
1561965Usp10ubiquitin specific peptidase 10194797285848014900Rat
620860Crispld2cysteine-rich secretory protein LCCL domain containing 2194805315348111485Rat
620205Zdhhc7zinc finger DHHC-type palmitoyltransferase 7194813930948156673Rat
13048846430548M08RiklRIKEN cDNA 6430548M08 gene like194816865148216571Rat
1560673Cibar2CBY1 interacting BAR domain containing 2194821761748229418Rat
7729006LOC102551361uncharacterized LOC102551361194825990348273928Rat
1562686Gse1Gse1 coiled-coil protein194827416448629456Rat
7599182LOC102551937uncharacterized LOC102551937194839030148399861Rat
1311055Gins2GINS complex subunit 2194862677048639523Rat
41005633LOC1200987245S ribosomal RNA194864268648642804Rat
1309651C19h16orf74similar to human chromosome 16 open reading frame 74194866028848686287Rat
1311219Emc8ER membrane protein complex subunit 8194870830448721626Rat
68374Cox4i1cytochrome c oxidase subunit 4i1194872168048727920Rat
7599156LOC102552167uncharacterized LOC102552167194874654548752520Rat
41189202LOC120098524uncharacterized LOC120098524194875422348779657Rat
1312024Irf8interferon regulatory factor 8194879058148812363Rat
41137063LOC120098548uncharacterized LOC120098548194901819549020314Rat
41300839LOC120098591uncharacterized LOC120098591194903216349036595Rat
9685086FendrrFOXF1 adjacent non-coding developmental regulatory RNA194912722549152780Rat
1584229Foxf1forkhead box F1194915394949157741Rat
1584226Mthfsdmethenyltetrahydrofolate synthetase domain containing194916426649178233Rat
621703Foxc2forkhead box C2194918603449188736Rat
1584212Foxl1forkhead box L1194919726949200682Rat
9204125LOC103694348uncharacterized LOC103694348194931791349323512Rat
41244786LOC120098555uncharacterized LOC120098555194933596649342209Rat
41104378LOC120098552uncharacterized LOC120098552194939241449395149Rat
1587275Nhp2-ps6NHP2 ribonucleoprotein, pseudogene 6194940748849407930Rat
41142692LOC120098556uncharacterized LOC120098556194949868649500592Rat
11473545LOC108348955uncharacterized LOC108348955194950547849520886Rat
1584205C19h16orf95similar to human chromosome 16 open reading frame 95194960581849618466Rat
41215469LOC120098534uncharacterized LOC120098534194961843849622601Rat
41048660LOC120098740U4 spliceosomal RNA194962387749623959Rat
1561069Fbxo31F-box protein 31194962481349656052Rat
11447020Trnam-cau13transfer RNA methionine (anticodon CAU) 13194965650449656576Rat
621315Map1lc3bmicrotubule-associated protein 1 light chain 3 beta194966579549673655Rat
1309494Zcchc14zinc finger CCHC-type containing 14194967418549718004Rat
7526201LOC102550418uncharacterized LOC102550418194976384449778086Rat
41376102LOC120098674small nucleolar RNA SNORA72194976913849769240Rat
1308416Jph3junctophilin 3194979396749855338Rat
1561676Klhdc4kelch domain containing 4194986097549894027Rat
4888596Mir3564microRNA 3564194987360349873714Rat
620639Slc7a5solute carrier family 7 member 5194993522049963823Rat
7581426LOC102550600uncharacterized LOC102550600194996386549972967Rat
2243Car5acarbonic anhydrase 5A194997309250002948Rat
1307464BanpBtg3 associated nuclear protein195000771050082742Rat
1583874Zfp469zinc finger protein 469195028233750324010Rat
1582810Zfpm1zinc finger protein, multitype 1195033435250391029Rat
40994374LOC120098606uncharacterized LOC120098606195036111950366739Rat
41400957LOC120098567uncharacterized LOC120098567195040871650410943Rat
621262Mlnrmotilin receptor195041357050422842Rat
1303257Zc3h18zinc finger CCCH-type containing 18195043486450479855Rat
1582798Il17cinterleukin 17C195048489050486169Rat
620573Cybacytochrome b-245 alpha chain195048759850495669Rat
621292Mvdmevalonate diphosphate decarboxylase195049636650506429Rat
1309658Snai3snail family transcriptional repressor 3195051677150529295Rat
1302950Rnf166ring finger protein 166195052943450539274Rat
1562594Ctu2cytosolic thiouridylase subunit 2195053918450544629Rat
1308822Piezo1piezo-type mechanosensitive ion channel component 1195054458050606812Rat
9392387LOC103694354uncharacterized LOC103694354195061644350620704Rat
1309211Cdt1chromatin licensing and DNA replication factor 1195062071350625659Rat
1307758Aprtadenine phosphoribosyl transferase195062620150628491Rat
1565391Galnsgalactosamine (N-acetyl)-6-sulfatase195062863950662477Rat
1304906Trappc2ltrafficking protein particle complex subunit 2L195066250750666193Rat
1562761Pabpn1lPABPN1 like195066996550673409Rat
1310547Cbfa2t3CBFA2/RUNX1 partner transcriptional co-repressor 3195067989750750028Rat
41047660LOC120098526uncharacterized LOC120098526195077749550779312Rat
40945936LOC120098493uncharacterized LOC120098493195078283150806340Rat
6502735LOC100909629uncharacterized LOC100909629195080663950817007Rat
41118193LOC120098494uncharacterized LOC120098494195081683050821350Rat
1586037Acsf3acyl-CoA synthetase family member 3195083511650875557Rat
11378322LOC108348960uncharacterized LOC108348960195085367750862848Rat
41050620LOC120098675small nucleolar RNA SNORA72195085932550859453Rat
1303000Cdh15cadherin 15195090375750927151Rat
1306679Ankrd11ankyrin repeat domain containing 11195094028451098962Rat
41014821LOC120098732small nucleolar RNA U3195111136951111592Rat
11440615Rps13-ps1ribosomal protein S13, pseudogene 1195111186351112717Rat
7650106LOC102551789uncharacterized LOC102551789195111449551116989Rat
727940Spg7SPG7 matrix AAA peptidase subunit, paraplegin195111708851151228Rat
621179Rpl13ribosomal protein L13195115399051156541Rat
40940624LOC120098677small nucleolar RNA MBII-202195115462651154708Rat
1307466Cpne7copine 7195116431651182676Rat
1310002Sult5a1sulfotransferase family 5A, member 1195118928751204275Rat
620324Dpep1dipeptidase 1195120983151237004Rat
40968069LOC120098589uncharacterized LOC120098589195121389651215018Rat
1311083Chmp1acharged multivesicular body protein 1A195123815351246433Rat
1561507Spata33spermatogenesis associated 33195124651451258894Rat
1304851Cdk10cyclin-dependent kinase 10195126001251273009Rat
1560840Spata2Lspermatogenesis associated 2-like195126907851273605Rat
1565149Vps9d1VPS9 domain containing 1195127699851290726Rat
1307469Zfp276zinc finger protein (C2H2 type) 276195129100551304240Rat
1311380FancaFA complementation group A195130412651362586Rat
41305797LOC120098676small nucleolar RNA SNORD43195131686151316921Rat
1305837Spire2spire-type actin nucleation factor 2195137336851411920Rat
1309054Tcf25transcription factor 25195141534151449725Rat
1312046Mc1rmelanocortin 1 receptor195145244851455375Rat
628595Tubb3tubulin, beta 3 class III195145718751466243Rat
1309008Def8differentially expressed in FDCP 8 homolog195147478351495638Rat
41276582LOC120098741U5 spliceosomal RNA195147932051479442Rat
1309722Afg3l1AFG3 (ATPase family gene 3)-like 1195150861251535773Rat
1310008Dbndd1dysbindin domain containing 1195153915451548441Rat
1307817Gas8growth arrest specific 8195155277051572323Rat
41242229LOC1200987235S ribosomal RNA195157420351574321Rat
41333231LOC1200986665S ribosomal RNA195157597951576097Rat
41162948LOC1200987175S ribosomal RNA195157774151577859Rat
41019155Rna5s6RNA, 5S ribosomal 6195157950151579619Rat
40984105Rna5s13RNA, 5S ribosomal 13195158126351581381Rat
41366977LOC1200987485S ribosomal RNA195158302051583138Rat
41264674LOC1200986725S ribosomal RNA195158477351584891Rat
41190846LOC1200987115S ribosomal RNA195159246751592585Rat
41226032LOC1200987125S ribosomal RNA195159423151594349Rat
41367669Rna5s7RNA, 5S ribosomal 7195159951351599631Rat
41016926LOC1200987165S ribosomal RNA195160127351601391Rat
41093667LOC1200987185S ribosomal RNA195160303751603155Rat
41011831LOC1200987195S ribosomal RNA195160479551604913Rat
41359396LOC1200987215S ribosomal RNA195160831151608429Rat
41022570LOC1200987225S ribosomal RNA195161007551610193Rat
1596918Rhouras homolog family member U195164147651651249Rat
7670659LOC102546393uncharacterized LOC102546393195166145051671801Rat
7535996LOC102546589uncharacterized LOC102546589195169795751709179Rat
11362865LOC108348963uncharacterized LOC108348963195174090651759396Rat
3529Rab4aRAB4A, member RAS oncogene family195179561351822706Rat
1563235Ccsapcentriole, cilia and spindle-associated protein195182495451843469Rat
11416554LOC108348965uncharacterized LOC108348965195184913851859631Rat
2025Acta1actin, alpha 1, skeletal muscle195188370951886735Rat
1307827Nup133nucleoporin 133195189160651941243Rat
41372170LOC120098745U6 spliceosomal RNA195189813751898243Rat
1311222Abcb10ATP binding cassette subfamily B member 10195195265551982910Rat
41060236LOC120098684small nucleolar RNA SNORA2/SNORA34 family195196412351964259Rat
1310215Taf5l1TATA-box binding protein associated factor 5 like 1195199170452011001Rat
1307980Urb2URB2 ribosome biogenesis homolog195201101952036607Rat
40977524Eif4e-ps8eukaryotic translation initiation factor 4E, pseudogene 8195203974552044162Rat
735056Cox6c-ps1cytochrome c oxidase subunit VIc, pseudogene195219261252193470Rat
1310692Galnt2polypeptide N-acetylgalactosaminyltransferase 2195221322652324816Rat
1310825Pgbd5piggyBac transposable element derived 5195233675152401906Rat
11455539LOC108348970uncharacterized LOC108348970195240782652416683Rat
1589822Cog2component of oligomeric golgi complex 2195249390152532667Rat
2069Agtangiotensinogen195252913952549618Rat
70965Capn9calpain 9195254944852586413Rat
1559896C19h1orf198similar to human chromosome 1 open reading frame 198195260406052629436Rat
41357037LOC120098646uncharacterized LOC120098646195262944652631588Rat
1310186Ttc13tetratricopeptide repeat domain 13195263759952692196Rat
1310264Arv1ARV1 homolog, fatty acid homeostasis modulator195269233752704156Rat
1309879Fam89afamily with sequence similarity 89, member A195271000252722630Rat
41338799Trnaa-agc43transfer RNA alanine (anticodon AGC) 43195276191052761990Rat
1560667Trim67tripartite motif-containing 67195276399152805906Rat
1562218C19h1orf131similar to human chromosome 1 open reading frame 131195280793252822259Rat
620179Gnpatglyceronephosphate O-acyltransferase195282232652848872Rat
620245Exoc8exocyst complex component 8195285501052857499Rat
1559496SprtnSprT-like N-terminal domain195285761252864864Rat
631375Egln1egl-9 family hypoxia-inducible factor 1195286790052907308Rat
2318551Ssbp1-ps3single stranded DNA binding protein 1, pseudogene 3195291542552922800Rat
7536826LOC102549918uncharacterized LOC102549918195294402852960028Rat
621574Tsnaxtranslin-associated factor X195297584852989886Rat
40964221Rps25-ps3ribosomal protein S25, pseudogene 3195300408853007369Rat
631359Disc1DISC1 scaffold protein195301420153223617Rat
7580695LOC102557452uncharacterized LOC102557452195330649853313376Rat
1306269Sipa1l2signal-induced proliferation-associated 1 like 2195338979253540466Rat
1307467SetsipSET like protein195356126253562780Rat
41214410LOC120098601uncharacterized LOC120098601195360354853611109Rat
1308644Map10microtubule-associated protein 10195364215653644948Rat
1306192Ntpcrnucleoside-triphosphatase, cancer-related195370149653715260Rat
1305883Pcnx2pecanex 2195371892053869559Rat
11387689LOC108353197involucrin-like195378336553789204Rat
41399234LOC120098634uncharacterized LOC120098634195381086453817660Rat
1306091Map3k21mitogen-activated protein kinase kinase kinase 21195388003253913560Rat
621447Kcnk1potassium two pore domain channel subfamily K member 1195395941153997726Rat
1589548Slc35f3solute carrier family 35, member F3195410281154371765Rat
7559315Coa6cytochrome c oxidase assembly factor 6195439574654398348Rat
1589526Tarbp1TAR (HIV-1) RNA binding protein 1195439826854449293Rat
1589517Irf2bp2interferon regulatory factor 2 binding protein 2195455941754565096Rat
11368559LOC108348977uncharacterized LOC108348977195462276654631873Rat
41364153LOC120098522uncharacterized LOC120098522195463227154637174Rat
7671054LOC102547567uncharacterized LOC102547567195471022154716821Rat
7712946LOC102547513uncharacterized LOC102547513195471901054728813Rat
7578198LOC102547637uncharacterized LOC102547637195472854054729928Rat
41091886LOC120098517uncharacterized LOC120098517195480296854815643Rat
7602217LOC102547807uncharacterized LOC102547807195481731254828236Rat
708467Tomm20translocase of outer mitochondrial membrane 20195492519754935188Rat
41285650LOC120098679small nucleolar RNA SNORA14195493422554934358Rat
1310161Rbm34RNA binding motif protein 34195493651654956810Rat
6489015Haus2-ps1HAUS augmin like complex subunit 2, pseudogene 1195497500154975705Rat
1586125Rpl10a-ps7ribosomal protein L10A, pseudogene 7195500448655007132Rat
1587112Hmgb1-ps33high-mobility group box 1, pseudogene 33195504586955047145Rat
41293225Gabarapl4gamma-aminobutyric acid receptor associated protein like 4195505275655053109Rat
620374Pard3par-3 family cell polarity regulator195508028255630111Rat
41065529Rpl28-ps7ribosomal protein L28, pseudogene 7195526181655262266Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33735D19Mit11202194737736947377562Ratregion
36972D19Rat21129194997648149976619Ratregion
37006D19Rat6154194771839747718547Ratregion
37050D3Rat22361194748364347483996Ratregion
36709D19Rat8172194434021444340377Ratregion
35028D19Rat2151195322561553225766Ratregion
35807D19Rat7153194538131745381467Ratregion
35973D19Rat3164195259827852598438Ratregion
39632D19Rat100228195516731955167549Ratregion
39944D19Rat58126195193334251933460Ratregion
38034D19Rat38229194620135346201584Ratregion
39430D19Rat62112194602467646024792Ratregion
39516D19Rat60205195321745853217652Ratregion
41262D19Rat57131195528314655283277Ratregion
40858D19Rat63214194621745246217657Ratregion
40962D19Rat61147194610288446103025Ratregion
43134D19Rat107147194642216846422293Ratregion
43135D19Rat106105195324772953247848Ratregion
43136D19Rat105212195137283351373046Ratregion
43137D19Rat103149195157712351577272Ratregion
43137D19Rat103149195158064351580794Ratregion
43137D19Rat103149195158240051582551Ratregion
43137D19Rat103149195158591551586064Ratregion
43137D19Rat103149195159008951590238Ratregion
43137D19Rat103149195159184951591998Ratregion
43137D19Rat103149195159537351595522Ratregion
43137D19Rat103149195159713351597284Ratregion
43137D19Rat103149195159889551599044Ratregion
43137D19Rat103149195160065551600804Ratregion
43137D19Rat103149195160241751602568Ratregion
43137D19Rat103149195160593751606086Ratregion
43137D19Rat103149195160769151607842Ratregion
45648D19Got49227194441881144419029Ratregion
45650D19Got52143194470007444700217Ratregion
45652D19Got48243194509906945099312Ratregion
45653D19Got51251194515635745156608Ratregion
45657D19Got53202194686339246863594Ratregion
45658D19Got55276194847462448474899Ratregion
45660D19Got54210194876351348763723Ratregion
60190D19Got62221194776603147766291Ratregion
1630527D19Got136136195435484154354974Ratregion
1631103D19Got135127194443898544439112Ratregion
1630035D19Got112128194985161849851746Ratregion
1638569D19Got113172195134467551344847Ratregion
1633285D19Got120106195129016051290261Ratregion
1640151D19Got111168195030007150300243Ratregion
1635650D19Got114167195222667052226839Ratregion
1636438D19Got127234195273732652737560Ratregion
1636706D19Got125133195278172352781856Ratregion
1638405D19Got142179195405453154054799Ratregion
1638405D19Got142179195405462054054799Ratregion
1633828D19Got115198195274009052740288Ratregion
1634291D19Got138260194912579149126051Ratregion
7206006Foxf1a183194915476149154944Ratregion
5036085Aprt60195062674750627000Ratregion
5038830RH127357208194526473645264944Ratregion
5038948RH127425213194872667848727766Ratregion
7206650Zfpm1904195038966150390565Ratregion
5036235UniSTS:142656340195335250953352849Ratregion
5039272RH127611190195195237151952561Ratregion
5036833AU049352232194434778744348019Ratregion
5034097RH141350201195263761252637813Ratregion
5031552AU047953139194749162147491755Ratregion
5031598AU047796205195157712351577319Ratregion
5031598AU047796205195157888351579079Ratregion
5031598AU047796205195158064351580841Ratregion
5031598AU047796205195158240051582598Ratregion
5031598AU047796205195158591551586111Ratregion
5031598AU047796205195158832951588525Ratregion
5031598AU047796205195159008951590285Ratregion
5031598AU047796205195159184951592045Ratregion
5031598AU047796205195159537351595569Ratregion
5031598AU047796205195159713351597331Ratregion
5031598AU047796205195159889551599091Ratregion
5031598AU047796205195160065551600851Ratregion
5031598AU047796205195160241751602615Ratregion
5031598AU047796205195160593751606133Ratregion
5031598AU047796205195160769151607889Ratregion
5031600AU047788173195157709751577270Ratregion
5031600AU047788173195158061751580792Ratregion
5031600AU047788173195158237451582549Ratregion
5031600AU047788173195158588951586062Ratregion
5031600AU047788173195159006351590236Ratregion
5031600AU047788173195159182351591996Ratregion
5031600AU047788173195159534751595520Ratregion
5031600AU047788173195159710751597282Ratregion
5031600AU047788173195159886951599042Ratregion
5031600AU047788173195160062951600802Ratregion
5031600AU047788173195160239151602566Ratregion
5031600AU047788173195160591151606084Ratregion
5031600AU047788173195160766551607840Ratregion
5031668AU047547187194923530449235493Ratregion
5034261RH141971184195205330552053489Ratregion
5026272RH131577188195054423250544563Ratregion
5026418RH132136185195153919451539379Ratregion
5026440RH132220186194453040444531305Ratregion
5029119RH143593287195127318751273486Ratregion
5034572BE119741160194700386247004022Ratregion
5034624BF390337197195275638252756580Ratregion
5029315RH144332169194526236345262532Ratregion
5029605BI283745150195144935351449503Ratregion
5032511D8Ertd713e214195149542051495634Ratregion
5034950AI236754133194750035847500491Ratregion
5027375AI314065120194550994245510062Ratregion
5027377AI18209090195165109351651183Ratregion
5025048AU015315244195114983951150083Ratregion
5030367BI29404596194939603149396127Ratregion
5030437BI288552171194800289648003067Ratregion
5033383RH138637203195048794650488149Ratregion
5033607RH139442121195198629051986411Ratregion
5025638RH129086166195284890952849075Ratregion
5028289D8Mit140122195334972253349844Ratregion
5028291D8Mit148331195176834451768675Ratregion
5033833RH140287183195165091751651100Ratregion
5028497X92498188194919856449198752Ratregion
5031137BI298201213195185600451856217Ratregion
5051863RH94702199194568367845683877Ratregion
5056239RH144263155194745817847458333Ratregion
5056863RH144624166194781113547811301Ratregion
5057100AI058627216195463145754631673Ratregion
5057408AA963875152194862919348629345Ratregion
5057498AI704778218195188372551883943Ratregion
5055411RH143786116195039000650390122Ratregion
5059518BE097197173195383616153836496Ratregion
5059518BE097197173195383632353836496Ratregion
5054763RH143411231194830987248310103Ratregion
5057950BF392976166194982173449821900Ratregion
5058558BF393292116194978258349782699Ratregion
5059558BE097296193195399738953997582Ratregion
5052484AA959943193195188372651883919Ratregion
5058148AI136171136194499343444993570Ratregion
5059780BE097847178195095193650952114Ratregion
5059860BE103433152195113415951134311Ratregion
5055571RH143878107195287400452874111Ratregion
5052989RH142390171195269516052695335Ratregion
5050134RH133881218194761584547616063Ratregion
5058382BG376843228194664685646647083Ratregion
5059090BF387455154194751525447515408Ratregion
5050416RH134044198194494337144943569Ratregion
5057794BE101560217195194973951949957Ratregion
5050644RH134175219194916725449167473Ratregion
5050736RH134229186195286444352864629Ratregion
5049998RH133803199195111385651114054Ratregion
5050844RH134290201195286570452865905Ratregion
5050858RH134299182194753215747532342Ratregion
5050302RH133978195195052962950529824Ratregion
5050562RH134128206195130210951302315Ratregion
5050596RH134147215195440174554401960Ratregion
5041734RH129028153195399751553997668Ratregion
5044028RH130368196195291162152911817Ratregion
5041234RH128740153194967349949673652Ratregion
5043884RH130283170195233585652336026Ratregion
5046140RH131581183195081678250816965Ratregion
5041860RH129100182194799915747999339Ratregion
5044262RH130502207195092620650926413Ratregion
5044670RH130737180194752729147527471Ratregion
5046338RH131695217195123765351237870Ratregion
5045360RH131133211195281079452811005Ratregion
5047476RH132350204195067593450676138Ratregion
5046210RH131622180195008532750085507Ratregion
5048950RH133199208195153892151539129Ratregion
5046740RH131927202195087521450875416Ratregion
5049746RH133658180195189254051892720Ratregion
5047186RH132183188194738725047387438Ratregion
5047232RH132209198195126062151260819Ratregion
5042042RH129205185195118932151189506Ratregion
5042180RH129286202194813962948139831Ratregion
5047270RH132231195194794234447942539Ratregion
5048396RH132879217195046602950466247Ratregion
5039860RH127949219194740506547405284Ratregion
5039976RH128017196195270383852704034Ratregion
5042128RH129256193194582498745825180Ratregion
5039662RH127834203194756170947561912Ratregion
5039756RH127889180195182247151822651Ratregion
5039800RH127914206195062644750626763Ratregion
5042286RH129347185194756167247561857Ratregion
5040782RH128480187195260414752604334Ratregion
5040898RH128547181194738758147387762Ratregion
5040040RH128055196195123826251238458Ratregion
5043872RH130276216194801465548014871Ratregion
5042938RH129735207195252661052526817Ratregion
5043000RH129771150194503602945036179Ratregion
5072220RH136722166195182504851825214Ratregion
5075590RH138682190195067954350679733Ratregion
5075790RH138798120194989459349894713Ratregion
5074244RH137904213195077785750778070Ratregion
5076656RH139302134195143229651432430Ratregion
5076832RH139404137195492339554923532Ratregion
5075368RH138554186195118242251182608Ratregion
5075448RH138599146195153633751536483Ratregion
5080674RH141716183195054475750544940Ratregion
5076084RH138970126195164985751649983Ratregion
5075568RH138669137195144692051447057Ratregion
5077754RH139939189194538511845385308Ratregion
5079516RH141043216195126882751269043Ratregion
5077106RH139564184194985838249858566Ratregion
5077558RH139825209194459188044592089Ratregion
5078262RH140237184194967597349676157Ratregion
5080054RH141356205195280807452808279Ratregion
5078216RH140211204194551019445510398Ratregion
5078882RH140606187194761680247616989Ratregion
5078338RH140283211194912131049121521Ratregion
5072920RH137130180194499381544993995Ratregion
5079354RH140946196195493668854936884Ratregion
5080324RH141514180195141100351411702Ratregion
5071022RH134841182195493654754936729Ratregion
5071140RH134909191194765258247652773Ratregion
5071474RH135103185194459763944597824Ratregion
5073774RH137631165195322336353223528Ratregion
5073114RH137246150195203628952036439Ratregion
5070966RH134809202194912726349127465Ratregion
5070972RH134812213194986102749861240Ratregion
5071148RH134915212195371905053719262Ratregion
5073396RH137412214195258620252586416Ratregion
5072114RH136659212195269754052697752Ratregion
5074308RH137942127195040871850408845Ratregion
5074342RH137961239194978546049785699Ratregion
5074366RH137975186195399916653999352Ratregion
5072336RH13679074195376901753769091Ratregion
5071782RH135281207195005532950055536Ratregion
5061714BE105999165195095063250950797Ratregion
5061784AI029017208194813958748140212Ratregion
5063346BE107571157194801671948016876Ratregion
5065096AI044337214194746348547463699Ratregion
5067058AU047990217195295994252960161Ratregion
5067150AU0478630195157712351577283Ratregion
5067150AU0478630195158064351580805Ratregion
5067150AU0478630195158240051582562Ratregion
5067150AU0478630195158591551586075Ratregion
5067150AU0478630195159008951590249Ratregion
5067150AU0478630195159184951592009Ratregion
5067150AU0478630195159537351595533Ratregion
5067150AU0478630195159713351597295Ratregion
5067150AU0478630195159889551599055Ratregion
5067150AU0478630195160065551600815Ratregion
5067150AU0478630195160241751602579Ratregion
5067150AU0478630195160593751606097Ratregion
5067150AU0478630195160769151607853Ratregion
5067194AU0477530195157709751577294Ratregion
5067194AU0477530195157885751579054Ratregion
5067194AU0477530195158061751580816Ratregion
5067194AU0477530195158237451582573Ratregion
5067194AU0477530195158412951584326Ratregion
5067194AU0477530195158588951586086Ratregion
5067194AU0477530195158830351588500Ratregion
5067194AU0477530195159006351590260Ratregion
5067194AU0477530195159182351592020Ratregion
5067194AU0477530195159534751595544Ratregion
5067194AU0477530195159710751597306Ratregion
5067194AU0477530195159886951599066Ratregion
5067194AU0477530195160062951600826Ratregion
5067194AU0477530195160239151602590Ratregion
5067194AU0477530195160591151606108Ratregion
5067194AU0477530195160766551607864Ratregion
5067256AU047866154195157712651577280Ratregion
5067256AU047866154195158064651580802Ratregion
5067256AU047866154195158240351582559Ratregion
5067256AU047866154195158591851586072Ratregion
5067256AU047866154195159009251590246Ratregion
5067256AU047866154195159185251592006Ratregion
5067256AU047866154195159537651595530Ratregion
5067256AU047866154195159713651597292Ratregion
5067256AU047866154195159889851599052Ratregion
5067256AU047866154195160065851600812Ratregion
5067256AU047866154195160242051602576Ratregion
5067256AU047866154195160594051606094Ratregion
5067256AU047866154195160769451607850Ratregion
5067280AU047851229195157712351577236Ratregion
5067280AU047851229195158591551586028Ratregion
5067280AU047851229195159008951590202Ratregion
5067280AU047851229195159184951591962Ratregion
5067280AU047851229195159537351595486Ratregion
5067280AU047851229195159713351597248Ratregion
5067280AU047851229195159889551599008Ratregion
5067280AU047851229195160065551600768Ratregion
5067280AU047851229195160241751602532Ratregion
5067280AU047851229195160593751606050Ratregion
5067280AU047851229195160769151607806Ratregion
5067320AU047827207195157712151577322Ratregion
5067320AU047827207195157888151579082Ratregion
5067320AU047827207195158064151580844Ratregion
5067320AU047827207195158239851582601Ratregion
5067320AU047827207195158591351586114Ratregion
5067320AU047827207195158832751588528Ratregion
5067320AU047827207195159008751590288Ratregion
5067320AU047827207195159184751592048Ratregion
5067320AU047827207195159537151595572Ratregion
5067320AU047827207195159713151597334Ratregion
5067320AU047827207195159889351599094Ratregion
5067320AU047827207195160065351600854Ratregion
5067320AU047827207195160241551602618Ratregion
5067320AU047827207195160593551606136Ratregion
5067320AU047827207195160768951607892Ratregion
5067380AU047789176195157709651577268Ratregion
5067380AU047789176195158061651580790Ratregion
5067380AU047789176195158237351582547Ratregion
5067380AU047789176195158588851586060Ratregion
5067380AU047789176195159006251590234Ratregion
5067380AU047789176195159182251591994Ratregion
5067380AU047789176195159534651595518Ratregion
5067380AU047789176195159710651597280Ratregion
5067380AU047789176195159886851599040Ratregion
5067380AU047789176195160062851600800Ratregion
5067380AU047789176195160239051602564Ratregion
5067380AU047789176195160591051606082Ratregion
5067380AU047789176195160766451607838Ratregion
5067396AU047777189195157713251577319Ratregion
5067396AU047777189195158065251580841Ratregion
5067396AU047777189195158240951582598Ratregion
5067396AU047777189195158592451586111Ratregion
5067396AU047777189195159185851592045Ratregion
5067396AU047777189195159538251595569Ratregion
5067396AU047777189195159714251597331Ratregion
5067396AU047777189195159890451599091Ratregion
5067396AU047777189195160066451600851Ratregion
5067396AU047777189195160242651602615Ratregion
5067396AU047777189195160594651606133Ratregion
5067396AU047777189195160770051607889Ratregion
5067400AU047773164195157712151577285Ratregion
5067400AU047773164195158064151580807Ratregion
5067400AU047773164195158239851582564Ratregion
5067400AU047773164195158591351586077Ratregion
5067400AU047773164195159008751590251Ratregion
5067400AU047773164195159184751592011Ratregion
5067400AU047773164195159537151595535Ratregion
5067400AU047773164195159713151597297Ratregion
5067400AU047773164195159889351599057Ratregion
5067400AU047773164195160065351600817Ratregion
5067400AU047773164195160241551602581Ratregion
5067400AU047773164195160593551606099Ratregion
5067400AU047773164195160768951607855Ratregion
5067432AU047749212194521980945220021Ratregion
5068130AU047330138194996791949968057Ratregion
5068484AU047117131194440083144400962Ratregion
5068616AU047037210194552457845524621Ratregion
5070075RH94458159195062641650626575Ratregion
5069768AU02890494195370723953707328Ratregion
5069804AU0479360195157683051577020Ratregion
5069804AU0479360195158210751582297Ratregion
5069804AU0479360195160212451602314Ratregion
5069804AU0479360195160388451604078Ratregion
5069804AU0479360195160916251609352Ratregion
5069868AU04676577194439581444395891Ratregion
5070528D8Ertd325e210195144945551449665Ratregion
5061910AI029641187195232459552324782Ratregion
5065322BE121432180195435155054351730Ratregion
5062470BE106712157195157208551572242Ratregion
5065574BE109337150195063225550632405Ratregion
5060844BF401198188195078288650783074Ratregion
5062826BI295081165195034540350345568Ratregion
5064208BI296374220195318556453185784Ratregion
5061894BI294073190195472561154725801Ratregion
5065324AA963604209195165103551651244Ratregion
5060494BE110224166195124482451244990Ratregion
5060526BE110287203195125865851258861Ratregion
5062228BE112937173194666804946668222Ratregion
5062520BF403354190194833126248331452Ratregion
5062724AW534069179194761647647616655Ratregion
5066036BF41317193194826030848260401Ratregion
5064574BF399372214195008200350082217Ratregion
5066130BE116945150195285067852850828Ratregion
5061314BE111581169195298615052986319Ratregion
5061330BF396236123195277454852774671Ratregion
5064656BF399501227195153992051540147Ratregion
5064700BE108343191194862760348627794Ratregion
5064770BE108480208195146736551467573Ratregion
5066316PMC151529P1486195188491951885405Ratregion
5063154BI301382159194956902449569183Ratregion
5064864BF40521893194917060749170700Ratregion
5064946BF40531796194821408848214184Ratregion
5061614BF402232187194752292047524135Ratregion
5061674BE105814159195107378051073939Ratregion
5084120AA944284189195182593951826128Ratregion
5086127AI145291218194765206147652279Ratregion
5087104AI407100209195115177751151986Ratregion
5087199BQ193745176194520599945206175Ratregion
5086457BE107052158195264008252640240Ratregion
5086508AA800179213194871176648711979Ratregion
5082995BI281562205195232282752323030Ratregion
5089837AU049392255194532978945330044Ratregion
5083521BF391658198194734064647340844Ratregion
5088309AU048492120194999598749996107Ratregion
5083865AA943006172195157092851571100Ratregion
5089695AU049308156194934030749340461Ratregion
5090503AU049789212195148372151483933Ratregion
5084060AI407691197195144802051448217Ratregion
5084278AI600036215194821623448216449Ratregion
5084284AI014001199195284870452848907Ratregion
5084378AI102036120195123871251238832Ratregion
5082009BF415610135195313150753131642Ratregion
5081040RH141930181195164993251650113Ratregion
5085300BQ196592217194571547645715693Ratregion
5081228RH142038183195189786951898052Ratregion
5090249AU049639173194823496548235138Ratregion
5089039AU048918289194689138046891669Ratregion
5089047AU048923229194838639948386628Ratregion
5081428AI547739197194767686847677065Ratregion
5082757BF390033140195350931553509455Ratregion
5082809BF390154150195270429752704447Ratregion
5086209BQ206042183195371563953715822Ratregion
5086341AI178936195195290344452903639Ratregion
5086411BE115013170194765282347652993Ratregion
5083213BG380104100195039046850390568Ratregion
5085563AI231345213195269420752694420Ratregion
5083685BI276801159195195284351953002Ratregion
5086729BQ206503188194916435749164545Ratregion
5503027MARC_52622-52623:1146767377:1174195143486351435155Ratregion
5503348UniSTS:238171815195130433951305154Ratregion
5507614Cox4a234194872672448727833Ratregion
5505336Foxf1a443194915434449154787Ratregion
5506088UniSTS:498328210195146587351466083Ratregion
5506815G46073717195075340150754118Ratregion
5507001fi45a03.x11464195307462153076085Ratregion
5507123UniSTS:224636164195410734354107507Ratregion
5507191UniSTS:225106175194760146747601642Ratregion
5499995UniSTS:236036107195067972950679836Ratregion
5500001UniSTS:236044107195456358554563692Ratregion
5501091PMC133998P8537195188456851885392Ratregion
5502419RH12476184194740525147405335Ratregion
5505012Mlycd70194746312647463196Ratregion
5501588RH707730195456287454563642Ratregion
5501774MARC_12079-12080:1004624307:1611195055492050555531Ratregion
5501792MARC_12315-12316:1005759661:1409195130091651301325Ratregion
5502022MARC_24021-24022:1029778648:1606195146518851465794Ratregion
5502617RH125550111194872616448726275Ratregion
5502389RH124713230194986099849861228Ratregion
Position Markers

Flank 1: (D19Rat8)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21944,340,214 - 44,340,377 (+)MAPPER
Rnor_6.01948,830,712 - 48,830,874NCBI
Rnor_5.01959,631,471 - 59,631,633UniSTS
Celera1943,635,359 - 43,635,521UniSTS
RH 3.4 Map19595.8RGD
RH 3.4 Map19595.8UniSTS
RH 2.0 Map19617.5RGD
SHRSP x BN Map1938.1498RGD
FHH x ACI Map1940.38RGD
Flank 2: (D19Rat57)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21955,283,146 - 55,283,277 (+)MAPPER
Rnor_6.01960,220,451 - 60,220,581NCBI
Rnor_5.01970,892,012 - 70,892,142UniSTS
RGSC_v3.41957,234,802 - 57,235,101RGD
RGSC_v3.41957,234,859 - 57,234,989UniSTS
RGSC_v3.11957,239,862 - 57,240,161RGD
Celera1954,621,043 - 54,621,173UniSTS
SHRSP x BN Map1942.5498RGD
SHRSP x BN Map1942.5498UniSTS
Cytogenetic Map19q12UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)193383821455283146Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194997648153225766Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
5135224Leukc1Leukocyte quantity QTL 1eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)194434021455283277Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cand_genes 1312024 5135221
qtl_cross_pair backcross 5135221
qtl_general explains 19% of the total variance with an additive effect of 162.7 by the MES allele 5135221
qtl_general explains 19% of the total variance with an additive effect of 162.7 by the MES allele 5135221
qtl_general number of animals used: 328 backcross rats 5135221
qtl_general measurement method: blood samples were collected from the jugular vein of 12 weeks old rats anesthetized with ether; number of leukocytes was counted by an automated cell counter and differential leukocyte counts (%) were determined on blood film stained with Wright's stain 5135221
qtl_general lineage: 7 eosinophilic male rats from F9 and F10 generation were backcrossed to MES/Slc 5135221
qtl_general software used: Map Manager QTXb20 5135221
qtl_statistics LRS: 16.4 5135221