Exoc8 (exocyst complex component 8) - Rat Genome Database

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Gene: Exoc8 (exocyst complex component 8) Rattus norvegicus
Analyze
Symbol: Exoc8
Name: exocyst complex component 8
RGD ID: 620245
Description: Predicted to enable phosphatidylinositol binding activity and small GTPase binding activity. Predicted to be involved in several processes, including Golgi to plasma membrane transport; endosome organization; and extracellular matrix disassembly. Predicted to act upstream of or within exocytosis. Located in cell leading edge. Part of exocyst. Orthologous to human EXOC8 (exocyst complex component 8); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Exo84; exocyst complex 84 kDa subunit; exocyst complex 84-kDa subunit
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81969,752,387 - 69,754,876 (-)NCBIGRCr8
mRatBN7.21952,855,010 - 52,857,499 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1952,852,578 - 52,857,491 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1959,639,787 - 59,642,276 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01960,490,839 - 60,493,328 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01962,566,254 - 62,568,743 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01957,647,305 - 57,649,794 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1957,647,291 - 57,649,827 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01968,360,544 - 68,363,033 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41955,066,272 - 55,068,761 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11955,071,156 - 55,073,642 (-)NCBI
Celera1952,222,177 - 52,224,666 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Exoc8RatActin-Accumulation Myopathy  ISOEXOC8 (Homo sapiens)8554872ClinVar Annotator: match by term: Actin accumulation myopathyClinVarPMID:28492532
Exoc8Ratgastrointestinal stromal tumor  ISOEXOC8 (Homo sapiens)8554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
Exoc8RatJoubert syndrome 1  ISOEXOC8 (Homo sapiens)8554872ClinVar Annotator: match by term: Familial aplasia of the vermisClinVarPMID:22700954
Exoc8RatNEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND BRAIN ATROPHY  ISOEXOC8 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with microcephaly more ...ClinVarPMID:25741868 more ...
Exoc8Ratparathyroid carcinoma  ISOEXOC8 (Homo sapiens)8554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Exoc8RatNEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND BRAIN ATROPHY  ISOEXOC8 (Homo sapiens)7240710 OMIM 

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Exoc8Rat1,2-dimethylhydrazine multiple interactionsISOExoc8 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of EXOC8 mRNACTDPMID:22206623
Exoc8Rat1,2-dimethylhydrazine decreases expressionISOExoc8 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of EXOC8 mRNACTDPMID:22206623
Exoc8Rat17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of EXOC8 mRNACTDPMID:29097150
Exoc8Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOEXOC8 (Homo sapiens)64804642 more ...CTDPMID:31675489
Exoc8Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOExoc8 (Mus musculus)6480464Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to EXOC8 promoter]CTDPMID:19654925
Exoc8Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of EXOC8 mRNACTDPMID:33387578
Exoc8Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOExoc8 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of EXOC8 mRNACTDPMID:21570461
Exoc8Rat2,4,6-tribromophenol decreases expressionISOEXOC8 (Homo sapiens)64804642 more ...CTDPMID:31675489
Exoc8Rat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of EXOC8 mRNACTDPMID:21346803
Exoc8Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of EXOC8 mRNACTDPMID:21346803
Exoc8Rat2-hydroxypropanoic acid decreases expressionISOEXOC8 (Homo sapiens)6480464Lactic Acid results in decreased expression of EXOC8 mRNACTDPMID:30851411
Exoc8Rat3,3',5,5'-tetrabromobisphenol A decreases expressionISOEXOC8 (Homo sapiens)6480464tetrabromobisphenol A results in decreased expression of EXOC8 proteinCTDPMID:31675489
Exoc8Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOEXOC8 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of EXOC8 mRNA more ...CTDPMID:28628672
Exoc8Rat4,4'-sulfonyldiphenol multiple interactionsISOEXOC8 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of EXOC8 mRNACTDPMID:28628672
Exoc8Rat4,4'-sulfonyldiphenol affects methylationISOExoc8 (Mus musculus)6480464bisphenol S affects the methylation of EXOC8 geneCTDPMID:31683443
Exoc8Rat4,4'-sulfonyldiphenol increases expressionISOEXOC8 (Homo sapiens)6480464bisphenol S results in increased expression of EXOC8 proteinCTDPMID:34186270
Exoc8Rat4,4'-sulfonyldiphenol increases methylationISOExoc8 (Mus musculus)6480464bisphenol S results in increased methylation of EXOC8 exonCTDPMID:33297965
Exoc8Rataconitine decreases expressionEXP 6480464Aconitine results in decreased expression of EXOC8 proteinCTDPMID:33236894
Exoc8Rataflatoxin B1 increases methylationISOEXOC8 (Homo sapiens)6480464Aflatoxin B1 results in increased methylation of EXOC8 geneCTDPMID:28458013
Exoc8Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of EXOC8 mRNACTDPMID:16483693

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Biological Process
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Exoc8Ratendosome organization involved_inISOEXOC8 (Homo sapiens)1624291 PMID:24344185RGDPMID:24344185
Exoc8Ratexocytosis  TAS 69988 RGD 
Exoc8Ratexocytosis involved_inIEAUniProtKB-KW:KW-02681600115GO_REF:0000043UniProtGO_REF:0000043
Exoc8Ratexocytosis involved_inIEAInterPro:IPR0339611600115GO_REF:0000002InterProGO_REF:0000002
Exoc8Ratexocytosis acts_upstream_of_or_withinISOEXOC8 (Homo sapiens)1624291 PMID:14525976RGDPMID:14525976
Exoc8Ratextracellular matrix disassembly involved_inISOEXOC8 (Homo sapiens)1624291 PMID:24344185RGDPMID:24344185
Exoc8RatGolgi to plasma membrane transport involved_inIBAPANTHER:PTN000484343 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Exoc8Ratprotein localization involved_inIBAFB:FBgn0266668 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Exoc8Ratprotein transport involved_inIEAUniProtKB-KW:KW-06531600115GO_REF:0000043UniProtGO_REF:0000043
1 to 9 of 9 rows

Cellular Component
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Exoc8Ratcell leading edge located_inIDA 13210533PMID:21658605UniProt 
Exoc8Ratcell projection located_inIEAUniProtKB-SubCell:SL-02801600115GO_REF:0000044UniProtGO_REF:0000044
Exoc8Ratcell projection located_inIEAUniProtKB-KW:KW-09661600115GO_REF:0000043UniProtGO_REF:0000043
Exoc8Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Exoc8Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Exoc8Ratexocyst  IDA 69988 RGD 
Exoc8Ratexocyst part_ofIEAInterPro:IPR0339611600115GO_REF:0000002InterProGO_REF:0000002
Exoc8Ratexocyst part_ofIBAFB:FBgn0266668 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Exoc8Ratexocyst part_ofISOEXOC8 (Homo sapiens)1624291 PMID:24056301RGDPMID:24056301
Exoc8Ratgrowth cone located_inIEAUniProtKB-SubCell:SL-02881600115GO_REF:0000044UniProtGO_REF:0000044
Exoc8Ratlate endosome located_inISOEXOC8 (Homo sapiens)1624291 PMID:24344185RGDPMID:24344185
Exoc8Ratperinuclear region of cytoplasm located_inIEAUniProtKB-SubCell:SL-01981600115GO_REF:0000044UniProtGO_REF:0000044
1 to 12 of 12 rows

Molecular Function

  


1 to 9 of 9 rows
#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Subunit structure of the mammalian exocyst complex. Kee Y, etal., Proc Natl Acad Sci U S A 1997 Dec 23;94(26):14438-43.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. SH3BP1, an exocyst-associated RhoGAP, inactivates Rac1 at the front to drive cell motility. Parrini MC, etal., Mol Cell. 2011 Jun 10;42(5):650-61. doi: 10.1016/j.molcel.2011.03.032.
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. An aPKC-exocyst complex controls paxillin phosphorylation and migration through localised JNK1 activation. Rosse C, etal., PLoS Biol. 2009 Nov;7(11):e1000235. Epub 2009 Nov 3.
1 to 9 of 9 rows
PMID:12954101   PMID:14525976   PMID:15920473   PMID:19946888   PMID:24056301   PMID:24344185   PMID:26582389   PMID:30053369  



Exoc8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81969,752,387 - 69,754,876 (-)NCBIGRCr8
mRatBN7.21952,855,010 - 52,857,499 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1952,852,578 - 52,857,491 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1959,639,787 - 59,642,276 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01960,490,839 - 60,493,328 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01962,566,254 - 62,568,743 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01957,647,305 - 57,649,794 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1957,647,291 - 57,649,827 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01968,360,544 - 68,363,033 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41955,066,272 - 55,068,761 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11955,071,156 - 55,073,642 (-)NCBI
Celera1952,222,177 - 52,224,666 (-)NCBICelera
Cytogenetic Map19q12NCBI
EXOC8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381231,332,753 - 231,337,852 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1231,332,753 - 231,337,852 (-)EnsemblGRCh38hg38GRCh38
GRCh371231,468,499 - 231,473,598 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361229,535,103 - 229,540,201 (-)NCBINCBI36Build 36hg18NCBI36
Build 341227,775,217 - 227,780,313NCBI
Celera1204,733,352 - 204,738,448 (-)NCBICelera
Cytogenetic Map1q42.2NCBI
HuRef1201,951,802 - 201,956,897 (-)NCBIHuRef
CHM1_11232,742,131 - 232,747,227 (-)NCBICHM1_1
T2T-CHM13v2.01230,716,003 - 230,721,102 (-)NCBIT2T-CHM13v2.0
Exoc8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398125,617,038 - 125,624,444 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8125,619,847 - 125,624,444 (-)EnsemblGRCm39 Ensembl
GRCm388124,890,299 - 124,897,705 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8124,893,108 - 124,897,705 (-)EnsemblGRCm38mm10GRCm38
MGSCv378127,414,199 - 127,421,605 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368127,779,198 - 127,783,795 (-)NCBIMGSCv36mm8
Celera8129,198,972 - 129,206,398 (-)NCBICelera
Cytogenetic Map8E2NCBI
cM Map872.82NCBI
Exoc8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554927,477,015 - 7,479,165 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554927,476,866 - 7,481,186 (+)NCBIChiLan1.0ChiLan1.0
EXOC8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2117,866,326 - 17,871,305 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1118,061,958 - 18,070,969 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01206,884,334 - 206,889,753 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11211,908,975 - 211,914,100 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1211,911,802 - 211,913,979 (-)Ensemblpanpan1.1panPan2
EXOC8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.148,133,526 - 8,138,185 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl48,133,670 - 8,135,853 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha48,125,862 - 8,130,738 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.048,158,970 - 8,163,846 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.148,162,330 - 8,167,207 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.048,284,329 - 8,289,206 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.048,512,727 - 8,517,604 (+)NCBIUU_Cfam_GSD_1.0
Exoc8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934443,238,232 - 43,240,797 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648419,403,458 - 19,405,197 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648419,403,458 - 19,407,202 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EXOC8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1459,192,434 - 59,197,542 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11459,192,345 - 59,197,550 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21463,861,048 - 63,866,149 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EXOC8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12568,594,174 - 68,599,236 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2568,596,957 - 68,599,134 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605570,502,324 - 70,507,389 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Exoc8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477518,397,673 - 18,399,823 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477518,397,418 - 18,403,669 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Exoc8
10 total Variants

Predicted Target Of
Summary Value
Count of predictions:19
Count of miRNA genes:16
Interacting mature miRNAs:19
Transcripts:ENSRNOT00000026757
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 10 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194997648153225766Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
5135224Leukc1Leukocyte quantity QTL 1eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)194434021455283277Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)193383821455283146Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat

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alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000026757   ⟹   ENSRNOP00000026757
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1952,852,578 - 52,857,491 (-)Ensembl
Rnor_6.0 Ensembl1957,647,291 - 57,649,827 (-)Ensembl
RefSeq Acc Id: NM_139043   ⟹   NP_620612
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81969,752,387 - 69,754,876 (-)NCBI
mRatBN7.21952,855,010 - 52,857,499 (-)NCBI
Rnor_6.01957,647,305 - 57,649,794 (-)NCBI
Rnor_5.01968,360,544 - 68,363,033 (-)NCBI
RGSC_v3.41955,066,272 - 55,068,761 (-)RGD
Celera1952,222,177 - 52,224,666 (-)RGD
Sequence:
Protein RefSeqs NP_620612 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC01581 (Get FASTA)   NCBI Sequence Viewer  
  EDL96746 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000026757
  ENSRNOP00000026757.1
GenBank Protein O54924 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_620612   ⟸   NM_139043
- UniProtKB: O54924 (UniProtKB/Swiss-Prot),   A6KJ24 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000026757   ⟸   ENSRNOT00000026757
PH

Name Modeler Protein Id AA Range Protein Structure
AF-O54924-F1-model_v2 AlphaFold O54924 1-716 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13701244
Promoter ID:EPDNEW_R11766
Type:multiple initiation site
Name:Exoc8_1
Description:exocyst complex component 8
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01957,649,729 - 57,649,789EPDNEW


1 to 30 of 30 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-5227 BioCyc
Ensembl Genes ENSRNOG00000019766 Ensembl, UniProtKB/Swiss-Prot
  ENSRNOG00000071599 ENTREZGENE
Ensembl Transcript ENSRNOT00000026757 ENTREZGENE
  ENSRNOT00000026757.4 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.58.1210 UniProtKB/Swiss-Prot
  1.20.58.1220 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot
InterPro Cullin_repeat-like_dom_sf UniProtKB/Swiss-Prot
  Exo84 UniProtKB/Swiss-Prot
  Exo84_C UniProtKB/Swiss-Prot
  Exo84_C_1 UniProtKB/Swiss-Prot
  Exo84_C_2 UniProtKB/Swiss-Prot
  PH-like_dom_sf UniProtKB/Swiss-Prot
  PH_domain UniProtKB/Swiss-Prot
KEGG Report rno:245709 UniProtKB/Swiss-Prot
NCBI Gene 245709 ENTREZGENE
PANTHER EXOCYST COMPLEX COMPONENT 8 UniProtKB/Swiss-Prot
  PTHR21426 UniProtKB/Swiss-Prot
Pfam Exo84_C UniProtKB/Swiss-Prot
  Vps51 UniProtKB/Swiss-Prot
PhenoGen Exoc8 PhenoGen
PROSITE PH_DOMAIN UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000019766 RatGTEx
  ENSRNOG00000071599 RatGTEx
SMART SM00233 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot
  SSF74788 UniProtKB/Swiss-Prot
UniProt A6KJ24 ENTREZGENE, UniProtKB/TrEMBL
  EXOC8_RAT UniProtKB/Swiss-Prot, ENTREZGENE
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-12-06 Exoc8  exocyst complex component 8  Exo84  exocyst complex 84-kDa subunit  Symbol and Name updated 1299863 APPROVED
2002-08-07 Exo84  exocyst complex 84-kDa subunit      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_expression broadly expressed 69988
gene_protein 84 kDa 69988