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Gene: Abcc12 (ATP binding cassette subfamily C member 12) Rattus norvegicus

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Symbol:

Abcc12

Name:

ATP binding cassette subfamily C member 12

RGD ID:

735100

Description:

Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in endoplasmic reticulum. Predicted to be active in membrane. Orthologous to human ABCC12 (ATP binding cassette subfamily C member 12); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; INTERACTS WITH atrazine; bisphenol A; furan.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

ATP-binding cassette protein C12; ATP-binding cassette protein C12 variant A; ATP-binding cassette sub-family C member 12; ATP-binding cassette transporter sub-family C member 12; ATP-binding cassette, sub-family C (CFTR/MRP), member 12; ATP-binding cassette, subfamily C (CFTR/MRP), member 12; multidrug resistance-associated protein 9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	36,722,550 - 36,798,868 (+)	NCBI		GRCr8
mRatBN7.2	19	20,549,298 - 20,621,991 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	20,549,405 - 20,620,734 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	22,234,945 - 22,302,213 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	27,429,457 - 27,496,732 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	30,392,245 - 30,459,522 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	21,541,324 - 21,612,757 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	21,541,742 - 21,612,527 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	32,551,209 - 32,622,321 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	21,889,228 - 21,962,766 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	21,894,053 - 21,967,592 (+)	NCBI
Celera	19	20,420,742 - 20,491,622 (+)	NCBI		Celera
Cytogenetic Map	19	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

bone marrow disease (ISO)

glycogen storage disease IXB (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP)

CGP 52608 (ISO)

chlorpyrifos (ISO)

dichloroacetic acid (ISO)

folic acid (ISO)

furan (EXP)

methapyrilene (ISO)

methoxychlor (EXP)

ozone (ISO)

pentachlorophenol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

tetrachloroethene (ISO)

tetrachloromethane (ISO)

trichloroethene (EXP)

triptonide (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

transmembrane transport (IBA,IEA)

Cellular Component

endoplasmic reticulum (IEA,ISO,ISS)

endoplasmic reticulum membrane (IEA)

membrane (IBA,IEA)

plasma membrane (IEA)

Molecular Function

ABC-type transporter activity (IEA)

ATP binding (IEA)

ATP hydrolysis activity (IEA)

ATPase-coupled transmembrane transporter activity (IBA)

nucleotide binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

multidrug resistance-associated protein mediated transport pathway (ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Characterization of the mouse Abcc12 gene and its transcript encoding an ATP-binding cassette transporter, an orthologue of human ABCC12.	Shimizu H, etal., Gene 2003 May 22;310:17-28.

Additional References at PubMed

PMID:18614015

Genomics

Comparative Map Data

Abcc12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	36,722,550 - 36,798,868 (+)	NCBI		GRCr8
mRatBN7.2	19	20,549,298 - 20,621,991 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	20,549,405 - 20,620,734 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	22,234,945 - 22,302,213 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	27,429,457 - 27,496,732 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	30,392,245 - 30,459,522 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	21,541,324 - 21,612,757 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	21,541,742 - 21,612,527 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	32,551,209 - 32,622,321 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	21,889,228 - 21,962,766 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	21,894,053 - 21,967,592 (+)	NCBI
Celera	19	20,420,742 - 20,491,622 (+)	NCBI		Celera
Cytogenetic Map	19	p11	NCBI

ABCC12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	48,080,882 - 48,155,993 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	48,080,882 - 48,156,018 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	48,114,793 - 48,189,904 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	46,674,385 - 46,738,182 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	46,674,384 - 46,738,182	NCBI
Celera	16	32,624,011 - 32,687,808 (-)	NCBI		Celera
Cytogenetic Map	16	q12.1	NCBI
HuRef	16	34,007,046 - 34,070,841 (-)	NCBI		HuRef
CHM1_1	16	49,524,782 - 49,588,575 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	53,877,688 - 53,952,799 (-)	NCBI		T2T-CHM13v2.0

Abcc12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	87,231,197 - 87,307,317 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	87,208,889 - 87,307,315 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	86,504,568 - 86,580,688 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	86,482,260 - 86,580,686 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	89,028,740 - 89,090,489 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	89,394,946 - 89,456,695 (-)	NCBI		MGSCv36	mm8
Celera	8	90,773,129 - 90,826,830 (-)	NCBI		Celera
Cytogenetic Map	8	C3	NCBI
cM Map	8	42.06	NCBI

Abcc12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955474	7,166,150 - 7,238,033 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955474	7,166,148 - 7,238,013 (+)	NCBI	ChiLan1.0	ChiLan1.0

ABCC12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	57,542,334 - 57,619,376 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	63,447,492 - 63,524,744 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	28,352,284 - 28,425,135 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	47,243,900 - 47,316,549 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	47,244,280 - 47,306,984 (-)	Ensembl	panpan1.1		panPan2

ABCC12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	66,885,272 - 66,967,963 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	66,885,042 - 66,968,060 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	63,461,458 - 63,544,137 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	67,443,767 - 67,526,459 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	67,443,562 - 67,526,556 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	64,256,791 - 64,339,454 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	65,280,662 - 65,363,424 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	66,168,371 - 66,251,101 (+)	NCBI		UU_Cfam_GSD_1.0

Abcc12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	58,188,099 - 58,257,885 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	1,331,887 - 1,391,535 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	1,331,887 - 1,391,535 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ABCC12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	36,557,290 - 36,649,715 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	36,559,645 - 36,653,044 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

ABCC12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	33,883,283 - 33,946,742 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	33,883,290 - 33,945,808 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	42,582,955 - 42,646,399 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Abcc12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624914	1,732,060 - 1,795,027 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624914	1,731,541 - 1,806,400 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Abcc12
475 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	122
Count of miRNA genes:	47
Interacting mature miRNAs:	59
Transcripts:	ENSRNOT00000021095, ENSRNOT00000042077
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1549847	Bss8	Bone structure and strength QTL 8	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	19	1	31963836	Rat
61447	Tcas1	Tongue tumor susceptibility QTL 1	6.08		tongue integrity trait (VT:0010553)	squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)	19	2316121	47316121	Rat
631681	Cm12	Cardiac mass QTL 12	3.33	0.00053	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	19	1	28982497	Rat
9590298	Uminl5	Urine mineral level QTL 5	3.59	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	19	1	36824771	Rat
1331737	Uae29	Urinary albumin excretion QTL 29	5.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	4096155	55283277	Rat
2298478	Eau8	Experimental allergic uveoretinitis QTL 8		0.0163	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	19	17154433	57337602	Rat
1578764	Stresp19	Stress response QTL 19	3.6	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	19	15630201	57337602	Rat
1558656	Prcs1	Prostate cancer susceptibility QTL 1	5		prostate integrity trait (VT:0010571)	percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)	19	15114598	34521833	Rat
9590090	Insglur8	Insulin/glucose ratio QTL 8	10.81	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	19	1	36824771	Rat
1331788	Rf45	Renal function QTL 45	2.818		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	19	15605023	46559041	Rat
724566	Uae12	Urinary albumin excretion QTL 12	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	2187927	56457239	Rat
724565	Tcas5	Tongue tumor susceptibility QTL 5	10.04		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	19	9977753	39654489	Rat
61407	Scl12	Serum cholesterol level QTL 12		0.001	blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	19	13926401	30303727	Rat
8552935	Pigfal10	Plasma insulin-like growth factor 1 level QTL 10	5.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	19	1	36824771	Rat
61350	Bp32	Blood pressure QTL 32		0.012	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	19	20483575	57337602	Rat
631840	Niddm38	Non-insulin dependent diabetes mellitus QTL 38	3.86		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	19	10323180	23069265	Rat
7411549	Bw130	Body weight QTL 130	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	15455860	57337602	Rat
10054132	Srcrt9	Stress Responsive Cort QTL 9	2.87	0.0017	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	19	1	27355345	Rat
724518	Uae19	Urinary albumin excretion QTL 19	5.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	7457249	42983518	Rat
8694186	Bw152	Body weight QTL 152	3.34	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	569374	45569374	Rat
61423	Cia14	Collagen induced arthritis QTL 14	3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	19	10827970	43544039	Rat
7411590	Foco7	Food consumption QTL 7	6.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	19	1	24688055	Rat
631678	Cm9	Cardiac mass QTL 9	4.27	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	19	1	28982497	Rat
9590250	Scort11	Serum corticosterone level QTL 11	23.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	19	1	36824771	Rat
2317848	Alcrsp21	Alcohol response QTL 21	1.899999976158142	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	19	3204777	48204777	Rat
9589102	Slep13	Serum leptin concentration QTL 13	4.63	0.001	blood leptin amount (VT:0005667)	plasma leptin level (CMO:0000781)	19	569374	45569374	Rat
7247442	Uae39	Urinary albumin excretion QTL 39			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	2187927	46708701	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
2	3	15	67	35	32	19	9	19	4	71	34	58	14	51	13

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_199377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006255241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005496627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005496628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY188179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY188180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021095 ⟹ ENSRNOP00000021095

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	19	20,549,405 - 20,620,734 (+)	Ensembl
Rnor_6.0 Ensembl	19	21,541,742 - 21,612,527 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000042077 ⟹ ENSRNOP00000044842

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	19	20,549,405 - 20,620,492 (+)	Ensembl
Rnor_6.0 Ensembl	19	21,541,742 - 21,612,527 (+)	Ensembl

RefSeq Acc Id:

NM_199377 ⟹ NP_955409

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,657 - 36,793,727 (+)	NCBI
mRatBN7.2	19	20,549,405 - 20,620,492 (+)	NCBI
Rnor_6.0	19	21,541,742 - 21,612,527 (+)	NCBI
Rnor_5.0	19	32,551,209 - 32,622,321 (+)	NCBI
RGSC_v3.4	19	21,889,228 - 21,962,766 (+)	RGD
Celera	19	20,420,742 - 20,491,622 (+)	RGD

Sequence:

show sequence

GTCCACAGAGGAGGAAGCTAGAGTGAACGTGTCTCAAAGCCAGGAGTCCAGGGCTCCAGAACAC
CATCAAGATGGTGGGCGAAGACCCGTACCTTATCTCAGACCTGGATCGCAGAGGCCGTCGGAGA
TCCTTTGCCGAGAGATATGATCCCAGCCTGAAAACCATGATCCCAATGCGACCCTATGCAAGGC
TGGCACCCAATCCTGTGGATGATGCGGGGCTGCTGTCCTTCGCCACGTTTTCCTGGCTCACACC
TGTGATGATTCGAAGTTACAAGCACACGCTGACCGTGGACACCCTGCCTCCACTATCTCCTTAC
GACTCATCGGATGTCAATGCCAAGAGACTCCAAATCCTTTGGGATGAAGAAATAGAAAGGGTAG
GGCCCGAGCGGGCCTCTTTGGGCCGTGTGGTTTGGAAATTCCAGAGGACCCGTGTTCTGATGGA
TGTTGTAGCCAACATTCTCTGCATCATCATGGCAGCCTTAGGGCCGACAGTTCTCATTCACCAA
ATCCTCCAGCACGTTACCAACATCTCCTCCGGACACATCGGGATCAGCATCTGCTTGTGTCTGG
CCCTTTTTGCCACCGAGTTTACCAAAGTCCTCTTTCGGGCCCTTGCCTGGGCCATAAATTACCG
CACAGCGATTCGACTGAAGGTGGCCCTGTCCACGCTAATTTTCAAAAATCTGTTGTCCTTCAAG
ACATTAACCCACATCTCTGCAGGCGAGGTACTCAATGTACTATCGAGTGATAGTTATTCCTTGT
TTGAGGCTGCCTTGTTTTGTCCTTTGCCAGCCACCATCCCGATCCTAATGGTCGTTTGTGCCGT
GTATGCCTTTTTCATTCTGGGGTCCACCGCTCTTGTTGGGATATGCGTGTATCTCATATTCATC
CCGATCCAGATGTTTATGGCCAAACTCAACTCAGCTTTCCGAAGATCAGCAATTTCAGTGACAG
ACAAGCGGGTTCAGACAATGAATGAGTTTCTGACCTGCATCAAACTGATTAAAATGTATGCCTG
GGAGAAATCTTTTATGAACACCATTCACGACATAAGAAAGAGAGAGAAAAAATTACTGGAAAAG
GCTGGATACGTCCAAAGTGGGAACTCAGCCCTGGCTCCCATAGTGTCTACCATAGCCATTGTGT
CTACTTTCACCTGCCACATTTTCCTGAAACGCACACTCACTGCCCCTGTGGCATTTAGTGTGAT
TGCCATGTTTAATGTAATGAAGTTTTCAATTGCAATCTTGCCTTTCTCGGTCAAAGCAGTGGCC
GAAGCCAGTGTCTCTCTAAGGAGAATGAAGAAAATTCTTGTAGCTAAAAGTCCCCCATCCTACA
TCACCCAACCAGAAGACCCAGATACTATCTTGCTTTTAGCAAATGCCACCCTGACATGGGAACA
AGAAATCAACAGGAAAAGAGGCCCATCGAAGACACAAGATCAGAGAAGGCACGTTTTCAAGAAA
CAGAGGGCAGAGCTATACAGTGAGCAAAGTCTCTCAGATCAGGGAGTTGCCAGCCCAGAGCGGC
AAAGTGGCAGCCCCAAGTCAGTACTACACAACATCAGCTTTGTGGTGAGAAAGGGAAAGGTCTT
GGGGATATGCGGGAATGTTGGAAGCGGGAAGAGTTCCCTCATTTCTGCTCTTCTAGGGCAGATG
CAGTTACAGAAAGGGGTCGTGGCTGCCAGTGGACCTTTGGCTTATGTTTCTCAGCAAGCTTGGA
TCTTCCACGGAAATGTGAGGGAGAACATCCTGTTTGGAGAGAAGTACAACCACCAAAGGTACCA
ACACACGGTTCATGTCTGTGGGCTCCAGAAGGATTTGAACAGCCTCCCTTATGGAGACCTGACT
GAGATTGGGGAGCGGGGTGTGAACCTCTCCGGGGGACAGAGGCAGAGGATCAGCCTGGCCCGGG
CTGTGTACGCCAACCGTCAGCTCTACCTGCTGGATGACCCGCTCTCGGCAGTGGATGCCCATGT
GGGGAAGCACGTCTTTGAAGAATGCATTAAAAAGACACTCAAGGGGAAGACTGTGGTGCTGGTT
ACCCACCAGCTGCAGTTCCTGGAGTCTTGCGATGAGGTCATTCTGTTAGAAGATGGAGAGATCT
GTGAAAAGGGCACCCACAAGGAGTTGATGGAAGAGAGAGGCCGCTATGCAAAGCTGATCCACAA
CCTCAGGGGACTGCAATTCAAGGATCCAGAGCACATTTACAATGTAGCCATGGTGGAGACCCTG
AAGGAGAGCCAAGCTCAAAGGGATGAAGACGCTGTCTTGGCTTCAGGAGATGAGAGAGATGAAG
GAAAAGAACCCGAGACAGAAGAATTTGTGGACATAAAAGCTCCCGTGCACCAGCTCATCCAGAT
TGAATCCCCCCAAGAAGGAATCGTGACCTGGAAAACATATCACACGTATATTAAAGCTTCTGGA
GGGTACCTGGTCTCCTTCCTGGTTTTGTGTCTCTTCTTCCTGATGATGGGCAGCTCTGCCTTCA
GCACCTGGTGGCTGGGGCTCTGGTTGGACAGTGGCTCCCAGGTCATCTGTGCACCCCAGAGCAA
TGAGACAGCCTGCAACGTTAACCAGACGCTGCAGGACACCAAACACCACATGTACCAGTTGGTT
TACATAGCAAGCATGATGTCTGTGCTGACGTTTGGCATCATCAAAGGCTTCACCTTCACCAACA
CGACACTGATGGCGTCCTCCTCCCTCCACAACAGAGTGTTTAACAAGATCGTCAGCAGCCCAAT
GAGCTTCTTTGACACGACTCCCACAGGCCGGCTAATGAACCGCTTTTCTAAAGATATGGATGAG
CTAGATGTGAGGCTGCCATTTCACGCTGAGAATTTTTTGCAGCAGTTTTCTATGGTGGTGTTTA
TTCTGGTGATTATGGCTGCCTCGTTTCCTGTTGTCCTCGTGGTGCTGGCTGGCCTGGCTATTCT
CTTCTTCATCCTTTTACGCATTTTCCATCGAGGGGTGCAGGAGCTCAAGCAGGTGGAGAACATC
AGCCGGTCCCCTTGGTTCTCTCACATCACCTCCTCCATGCAGGGTCTGGGTGTCATCCATGCCT
ACGACAAAAAGGACGATTGCATCAGCAAGTTTAAGGCGCTCAATGATGAAAACTCCAGCCACCT
CTTGTACTTTAACTGTGCACTCAGGTGGTTTGCTCTCAGAATGGACATCCTCATGAACATCGTC
ACCTTTGTCGTGGCCTTGCTGGTGACCCTGAGCTTTTCTTCAATCAGTGCTTCATCCAAAGGCT
TGTCCCTGTCTTACATCATCCAGCTCAGTGGACTGCTTCAAGTGTGTGTGCGAACAGGAACAGA
GACCCAAGCCAAGTTCACCTCTGCAGAGCTAATGAGGGAGTACATTTCGACCTGTGTCCCTGAA
CACACTCAATCCTTCAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGTGGGGAGATAACTT
TCAAGGACTATCGGATGAGATACAGAGACAACACCCCTCTCGTTCTCGATGGGTTGAACCTGAA
CATCCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGAACGGGCTCTGGTAAATCATCACTGGGC
ATGGCCCTGTTTCGTCTGGTGGAACCAGCCTCTGGCACCATCTTCATTGACGAGGTGGATATCT
GCACTGTGGGTCTGGAAGAGCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTT
TGTAGGTACAGTAAGGTACAACTTGGATCCCTTGGGGAGTCACACCGACGAGATGCTCTGGCAT
GTTTTGGAGAGAACATTCATGAGAGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAG
TCACAGAAAACGGGGAAAACTTCTCAGTAGGAGAACGCCAGCTGCTTTGTATGGCCCGGGCACT
TCTCCGTAATTCAAAAATCATTCTCCTTGATGAAGCTACTGCCTCCATGGATTCCAAGACGGAC
ACCCTTGTTCAGAGCACCATAAAAGAGGCCTTCAAAAGCTGCACAGTGCTGACCATCGCTCATC
GCCTAAACACTGTTCTCAACTGTGACCTTGTCCTGGTCATGGAAAATGGGAAGGTGATTGAGTT
TGACAAGCCTGAAGTCCTCGCTGAGAAGCCTGACTCTGCATTTGCGATGTTACTAGCTGCAGAA
GTTGGACTGTAAAGGTCCCGTGGTTGGTTTGAGAGGAGACAATGGATGTGTGAGAGGAGAAGCC
TGAAGGTAGAGTCAAGCAGCCCTGGCCACAGCCCCTCCCACCCATGGAGCACAGGGTGAGCTGG
GGCTGAGATGTGTCCCTTGCCCTTCTGGTCACCTCCCTTGGCAGACTCAGGGTTAGTTCTGGAT
GGTGAAGAATCCAGACAAAGCTGGGGGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGG
TCCTCATGGTCCTCATCAATACTACATAATGCTCGAGAATGGGAACATTCTAACTTTCCGTCCA
AAAGCAGTAAAAGCGAATGAGATGGAAAATGCCCAAGGCTGGAGGTAACAGCGCTCCTCGC

hide sequence

RefSeq Acc Id:

XM_006255241 ⟹ XP_006255303

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,550 - 36,793,999 (+)	NCBI
mRatBN7.2	19	20,549,298 - 20,620,761 (+)	NCBI
Rnor_6.0	19	21,541,326 - 21,612,757 (+)	NCBI
Rnor_5.0	19	32,551,209 - 32,622,321 (+)	NCBI

Sequence:

show sequence

AGGGGGAACACGGGGCCAAAAATGTACAGGGCCTAGAGTGACAGTACAGAGATGTAGGCATTGA
CCTCAGCTGGGCTGACCTGTGCTGGAGTCACTATGGGAGACCTCTGCTCTTCCGTTTCATCAAG
CAATGGGATGGGGGTTGGAGGAAGATTCATCTGCTCATAGGCAGTGGTATGCTGGGACAAGCTG
GAGGCAAGGCTAGGCCAACCTAGCCTTATGAGCTCCAACACTCACTGCAGGCGCCTGGTGTCCT
ACAGATCAGTCCTGGGATGGGGCAGTGCCCTTTAATGTGGGCCTGAGGGAATGTTGGCTCTCTC
AGAGTTCCCTCCTCAGGTGTGGTGGGAGTGGCAGTTGAATGGGGCAGTTGGAGAGGAGGGCTCC
CAGCAGGTGGGACAAGGGAAAGGAAACCTGAGGTCCACAGAGGAGGAAGCTAGAGTGAACGTGT
CTCAAAGCCAGGAGTCCAGGGCTCCAGAACACCATCAAGATGGTGGGCGAAGACCCGTACCTTA
TCTCAGACCTGGATCGCAGAGGCCGTCGGAGATCCTTTGCCGAGAGATATGATCCCAGCCTGAA
AACCATGATCCCAATGCGACCCTATGCAAGGCTGGCACCCAATCCTGTGGATGATGCGGGGCTG
CTGTCCTTCGCCACGTTTTCCTGGCTCACACCTGTGATGATTCGAAGTTACAAGCACACGCTGA
CCGTGGACACCCTGCCCCCACTATCTCCTTACGACTCATCGGATGTCAATGCCAAGAGACTCCA
AATCCTTTGGGATGAAGAAATAGAAAGGGTAGGGCCCGAGCGGGCCTCTTTGGGCCGTGTGGTT
TGGAAATTCCAGAGGACCCGTGTTCTGATGGATGTTGTAGCCAACATTCTCTGCATCATCATGG
CAGCCTTAGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCACGTTACCAACATCTCCTCCGG
ACACATCGGGATCAGCATCTGCTTGTGTCTGGCCCTTTTTGCCACCGAGTTTACCAAAGTCCTC
TTTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAGCGATTCGACTGAAGGTGGCCCTGTCCA
CGCTAATTTTCAAAAATCTGTTGTCCTTCAAGACATTAACCCACATCTCTGCAGGCGAGGTACT
CAATGTACTATCGAGTGATAGTTATTCCTTGTTTGAGGCTGCCTTGTTTTGTCCTTTGCCAGCC
ACCATCCCGATCCTAATGGTCGTTTGTGCCGTGTATGCCTTTTTCATTCTGGGGTCCACCGCTC
TTGTTGGGATATGCGTGTATCTCATATTCATCCCGATCCAGATGTTTATGGCCAAACTCAACTC
AGCTTTCCGAAGATCAGCAATTTCAGTGACAGACAAGCGGGTTCAGACAATGAATGAGTTTCTG
ACCTGCATCAAACTGATTAAAATGTATGCCTGGGAGAAATCTTTTATGAACACCATTCACGACA
TAAGAAAGAGAGAGAAAAAATTACTGGAAAAGGCTGGATACGTCCAAAGTGGGAACTCAGCCCT
GGCTCCCATAGTGTCTACCATAGCCATTGTGTCTACTTTCACCTGCCACATTTTCCTGAAACGC
ACACTCACTGCCCCTGTGGCATTTAGTGTGATTGCCATGTTTAATGTAATGAAGTTTTCAATTG
CAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGCCAGTGTCTCTCTAAGGAGAATGAAGAA
AATTCTTGTAGCTAAAAGTCCCCCATCCTACATCACCCAACCAGAAGACCCAGATACTATCTTG
CTTTTAGCAAATGCCACCCTGACATGGGAACAAGAAATCAACAGGAAAAGAGGCCCATTGAAGA
CACAAGATCAGAGAAGGCACGTTTTCAAGAAACAGAGGGCAGAGCTATACAGTGAGCAAAGTCT
CTCAGATCAGGGAGTTGCCAGCCCAGAGCGGCAAAGTGGCAGCCCCAAGTCAGTACTACACAAC
ATCAGCTTTGTGGTGAGAAAGGGAAAGGTCTTGGGGATATGCGGGAATGTTGGAAGCGGGAAGA
GTTCCCTCATTTCTGCTCTTCTAGGGCAGATGCAGTTACAGAAAGGGGTCGTGGCTGTCAGTGG
ACCTTTGGCTTATGTTTCTCAGCAAGCTTGGATCTTCCACGGAAATGTGAGGGAGAACATCCTG
TTTGGAGAGAAGTACAACCACCAAAGGTACCAACACACGGTTCATGTCTGTGGGCTCCAGAAGG
ATTTGAACAGCCTCCCTTATGGAGACCTGACTGAGATTGGGGAGCGGGGTGTGAACCTCTCCGG
GGGACAGAGGCAGAGGATCAGCCTGGCCCGGGCTGTGTACGCCAACCGTCAGCTCTACCTGCTG
GATGACCCGCTCTCGGCAGTGGATGCCCATGTGGGGAAGCACGTCTTTGAAGAATGCATTAAAA
AGACACTCAAGGGGAAGACTGTGGTGCTGGTTACCCACCAGCTGCAGTTCCTGGAGTCTTGCGA
TGAGGTCATTCTGTTAGAAGATGGAGAGATCTGTGAAAAGGGCACCCACAAGGAGTTGATGGAA
GAGAGAGGCCGCTATGCAAAGCTGATCCACAACCTCAGGGGACTGCAATTCAAGGATCCAGAGC
ACATTTACAATGTAGCCATGGTGGAGACCCTGAAGGAGAGCCAAGCTCAAAGGGATGAAGACGC
TGTCTTGGCTTCAGGAGATGAGAGAGATGAAGGAAAAGAACCCGAGACAGAAGAATTTGTGGAC
ATAAAAGCTCCCGTGCACCAGCTCATCCAGATTGAATCCCCCCAAGAAGGAATCGTGACCTGGA
AAACATATCACACGTATATTAAAGCTTCTGGAGGGTACCTGGTCTCCTTCCTGGTTTTGTGTCT
CTTCTTCCTGATGATGGGCAGCTCTGCCTTCAGCACCTGGTGGCTGGGGCTCTGGTTGGACAGT
GGCTCCCAGGTCATCTGTGCACCCCAGAGCAATGAGACAGCCTGCAACGTTAACCAGACGCTGC
AGGACACCAAACACCACATGTACCAGTTGGTTTACATAGCAAGCATGATGTCTGTGCTGACGTT
TGGCATCATCAAAGGCTTCACCTTCACCAACACGACACTGATGGCGTCCTCCTCCCTCCACAAC
AGAGTGTTTAACAAGATCGTCAGCAGCCCAATGAGCTTCTTTGACACGACTCCCACAGGCCGGC
TAATGAACCGCTTTTCTAAAGATATGGATGAGCTAGATGTGAGGCTGCCATTTCACGCTGAGAA
TTTTTTGCAGCAGTTTTCTATGGTGGTGTTTATTCTGGTGATTATGGCTGCCTCGTTTCCTGTT
GTCCTCGTGGTGCTGGCTGGCCTGGCTATTCTCTTCTTCATCCTTTTACGCATTTTCCATCGAG
GGGTGCAGGAGCTCAAGCAGGTGGAGAACATCAGCCGGTCCCCTTGGTTCTCTCACATCACCTC
CTCCATGCAGGGTCTGGGTGTCATCCATGCCTACGACAAAAAGGACGATTGCATAAGCAAGTTT
AAGGCGCTCAATGATGAAAACTCCAGCCACCTCTTGTACTTTAACTGTGCACTCAGGTGGTTTG
CTCTCAGAATGGACATCCTCATGAACATCGTCACCTTTGTCGTGGCCTTGCTGGTGACCCTGAG
CTTTTCTTCAATCAGTGCTTCATCCAAAGGCTTGTCCCTGTCTTACATCATCCAGCTCAGTGGA
CTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAGTTCACCTCTGCAGAGCTAA
TGAGGGAGTACATTTCGACCTGTGTCCCTGAACACACTCAATCCTTCAAAGTGGGGACCTGTCC
CAAAGACTGGCCGAGCCGTGGGGAGATAACTTTCAAGGACTATCGGATGAGATACAGAGACAAC
ACCCCTCTCGTTCTCGATGGGTTGAACCTGAACATCCAAAGCGGGCAGACAGTTGGGATTGTGG
GAAGAACGGGCTCTGGTAAATCATCACTGGGCATGGCCCTGTTTCGTCTGGTGGAACCAGCCTC
TGGCACCATCTTCATTGACGAGGTGGATATCTGCACTGTGGGTCTGGAAGAGCTCCGAACCAAG
CTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAGTAAGGTACAACTTGGATCCCT
TGGGGAGTCACACCGACGAGATGCTCTGGCATGTTTTGGAGAGAACATTCATGAGAGACACAAT
AATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAACGGGGAAAACTTCTCAGTAGGA
GAACGCCAGCTGCTTTGTATGGCCCGGGCACTTCTCCGTAATTCAAAAATCATTCTCCTTGATG
AAGCTACTGCCTCCATGGATTCCAAGACGGACACCCTTGTTCAGAGCACCATAAAAGAGGCCTT
CAAAAGCTGCACAGTGCTGACCATCGCTCATCGCCTAAACACTGTTCTCAACTGTGACCTTGTC
CTGGTCATGGAAAATGGGAAGGTGCAGGAAGTTCTGGTGATTGAGTTTGACAAGCCTGAAGTCC
TCGCTGAGAAGCCTGACTCTGCATTTGCGATGTTACTAGCTGCAGAAGTTGGACTGTAAAGGTC
CCGTGGTTGGTTTGAGAGGAGACAATGGATGTGTGAGAGGAGAAGCCTGAAGGTAGAGTCAAGC
AGCCCTGGCCACAGCCCCTCCCACCCATGGAGCACAGGGTGAGCTGGGGCTGAGATGTGTCCCT
TGCCCTTCTGGTCACCTCCCTTGGCAGACTCAGGGTTAGTTCTGGATGGTGAAGAATCCAGACA
AAGCTGGGGGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCTCATGGTCCTCATC
AATACTACATAATGCTCGAGAATGGGAACATTCTAACTTTCCGTCCAAAAGCAGTAAAAGCGAA
TGAGATGGAAAATGCCCAAGGCTGGAGGTAACAGCGCTCCTCGCTTTTGTTACCAGACAAGAGA
GAAGGGTTTTCTTTCTGTTTAATTTCATTCCACTCTTAGCTAACTATGTGGCAAGCAGTAACCG
CATAGATCTATAGCACGGAAGACTGGTGATAGTGTTTGGCATGAGATTTTTTTTTTCCAAAGAA
ATCATATTATATGTTACAGTTGATCTGTTAAAATAAGCAGAAAGCAAAACACTGGGGTTTCTGA
ATAAATGACATTTTAATA

hide sequence

RefSeq Acc Id:

XM_008772375 ⟹ XP_008770597

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,550 - 36,793,999 (+)	NCBI
mRatBN7.2	19	20,549,298 - 20,620,761 (+)	NCBI
Rnor_6.0	19	21,541,325 - 21,612,757 (+)	NCBI

Sequence:

show sequence

CAGGGGGAACACGGGGCCAAAAATGTACAGGGCCTAGAGTGACAGTACAGAGATGTAGGCATTG
ACCTCAGCTGGGCTGACCTGTGCTGGAGTCACTATGGGAGACCTCTGCTCTTCCGTTTCATCAA
GCAATGGGATGGGGGTTGGAGGAAGATTCATCTGCTCATAGGCAGTGGTATGCTGGGACAAGCT
GGAGGCAAGGCTAGGCCAACCTAGCCTTATGAGCTCCAACACTCACTGCAGGCGCCTGGTGTCC
TACAGATCAGTCCTGGGATGGGGCAGTGCCCTTTAATGTGGGCCTGAGGGAATGTTGGCTCTCT
CAGAGTTCCCTCCTCAGGTGTGGTGGGAGTGGCAGTTGAATGGGGCAGTTGGAGAGGAGGGCTC
CCAGCAGGTGGGACAAGGGAAAGGAAACCTGAGGTCCACAGAGGAGGAAGCTAGAGTGAACGTG
TCTCAAAGCCAGGAGTCCAGGGCTCCAGAACACCATCAAGATGGTGGGCGAAGACCCGTACCTT
ATCTCAGACCTGGATCGCAGAGGCCGTCGGAGATCCTTTGCCGAGAGATATGATCCCAGCCTGA
AAACCATGATCCCAATGCGACCCTATGCAAGGCTGGCACCCAATCCTGTGGATGATGCGGGGCT
GCTGTCCTTCGCCACGTTTTCCTGGCTCACACCTGTGATGATTCGAAGTTACAAGCACACGCTG
ACCGTGGACACCCTGCCCCCACTATCTCCTTACGACTCATCGGATGTCAATGCCAAGAGACTCC
AAATCCTTTGGGATGAAGAAATAGAAAGGGTAGGGCCCGAGCGGGCCTCTTTGGGCCGTGTGGT
TTGGAAATTCCAGAGGACCCGTGTTCTGATGGATGTTGTAGCCAACATTCTCTGCATCATCATG
GCAGCCTTAGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCACGTTACCAACATCTCCTCCG
GACACATCGGGATCAGCATCTGCTTGTGTCTGGCCCTTTTTGCCACCGAGTTTACCAAAGTCCT
CTTTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAGCGATTCGACTGAAGGTGGCCCTGTCC
ACGCTAATTTTCAAAAATCTGTTGTCCTTCAAGACATTAACCCACATCTCTGCAGGCGAGGTAC
TCAATGTACTATCGAGTGATAGTTATTCCTTGTTTGAGGCTGCCTTGTTTTGTCCTTTGCCAGC
CACCATCCCGATCCTAATGGTCGTTTGTGCCGTGTATGCCTTTTTCATTCTGGGGTCCACCGCT
CTTGTTGGGATATGCGTGTATCTCATATTCATCCCGATCCAGATGTTTATGGCCAAACTCAACT
CAGCTTTCCGAAGATCAGCAATTTCAGTGACAGACAAGCGGGTTCAGACAATGAATGAGTTTCT
GACCTGCATCAAACTGATTAAAATGTATGCCTGGGAGAAATCTTTTATGAACACCATTCACGAC
ATAAGAAAGAGAGAGAAAAAATTACTGGAAAAGGCTGGATACGTCCAAAGTGGGAACTCAGCCC
TGGCTCCCATAGTGTCTACCATAGCCATTGTGTCTACTTTCACCTGCCACATTTTCCTGAAACG
CACACTCACTGCCCCTGTGGCATTTAGTGTGATTGCCATGTTTAATGTAATGAAGTTTTCAATT
GCAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGCCAGTGTCTCTCTAAGGAGAATGAAGA
AAATTCTTGTAGCTAAAAGTCCCCCATCCTACATCACCCAACCAGAAGACCCAGATACTATCTT
GCTTTTAGCAAATGCCACCCTGACATGGGAACAAGAAATCAACAGGAAAAGAGGCCCATTGAAG
ACACAAGATCAGAGAAGGCACGTTTTCAAGAAACAGAGGGCAGAGCTATACAGTGAGCAAAGTC
TCTCAGATCAGGGAGTTGCCAGCCCAGAGCGGCAAAGTGGCAGCCCCAAGTCAGTACTACACAA
CATCAGCTTTGTGGTGAGAAAGGGAAAGGTCTTGGGGATATGCGGGAATGTTGGAAGCGGGAAG
AGTTCCCTCATTTCTGCTCTTCTAGGGCAGATGCAGTTACAGAAAGGGGTCGTGGCTGTCAGTG
GACCTTTGGCTTATGTTTCTCAGCAAGCTTGGATCTTCCACGGAAATGTGAGGGAGAACATCCT
GTTTGGAGAGAAGTACAACCACCAAAGGTACCAACACACGGTTCATGTCTGTGGGCTCCAGAAG
GATTTGAACAGCCTCCCTTATGGAGACCTGACTGAGTGCCATTATCCCCATCTACAGATTGGGG
AGCGGGGTGTGAACCTCTCCGGGGGACAGAGGCAGAGGATCAGCCTGGCCCGGGCTGTGTACGC
CAACCGTCAGCTCTACCTGCTGGATGACCCGCTCTCGGCAGTGGATGCCCATGTGGGGAAGCAC
GTCTTTGAAGAATGCATTAAAAAGACACTCAAGGGGAAGACTGTGGTGCTGGTTACCCACCAGC
TGCAGTTCCTGGAGTCTTGCGATGAGGTCATTCTGTTAGAAGATGGAGAGATCTGTGAAAAGGG
CACCCACAAGGAGTTGATGGAAGAGAGAGGCCGCTATGCAAAGCTGATCCACAACCTCAGGGGA
CTGCAATTCAAGGATCCAGAGCACATTTACAATGTAGCCATGGTGGAGACCCTGAAGGAGAGCC
AAGCTCAAAGGGATGAAGACGCTGTCTTGGCTTCAGGAGATGAGAGAGATGAAGGAAAAGAACC
CGAGACAGAAGAATTTGTGGACATAAAAGCTCCCGTGCACCAGCTCATCCAGATTGAATCCCCC
CAAGAAGGAATCGTGACCTGGAAAACATATCACACGTATATTAAAGCTTCTGGAGGGTACCTGG
TCTCCTTCCTGGTTTTGTGTCTCTTCTTCCTGATGATGGGCAGCTCTGCCTTCAGCACCTGGTG
GCTGGGGCTCTGGTTGGACAGTGGCTCCCAGGTCATCTGTGCACCCCAGAGCAATGAGACAGCC
TGCAACGTTAACCAGACGCTGCAGGACACCAAACACCACATGTACCAGTTGGTTTACATAGCAA
GCATGATGTCTGTGCTGACGTTTGGCATCATCAAAGGCTTCACCTTCACCAACACGACACTGAT
GGCGTCCTCCTCCCTCCACAACAGAGTGTTTAACAAGATCGTCAGCAGCCCAATGAGCTTCTTT
GACACGACTCCCACAGGCCGGCTAATGAACCGCTTTTCTAAAGATATGGATGAGCTAGATGTGA
GGCTGCCATTTCACGCTGAGAATTTTTTGCAGCAGTTTTCTATGGTGGTGTTTATTCTGGTGAT
TATGGCTGCCTCGTTTCCTGTTGTCCTCGTGGTGCTGGCTGGCCTGGCTATTCTCTTCTTCATC
CTTTTACGCATTTTCCATCGAGGGGTGCAGGAGCTCAAGCAGGTGGAGAACATCAGCCGGTCCC
CTTGGTTCTCTCACATCACCTCCTCCATGCAGGGTCTGGGTGTCATCCATGCCTACGACAAAAA
GGACGATTGCATAAGCAAGTTTAAGGCGCTCAATGATGAAAACTCCAGCCACCTCTTGTACTTT
AACTGTGCACTCAGGTGGTTTGCTCTCAGAATGGACATCCTCATGAACATCGTCACCTTTGTCG
TGGCCTTGCTGGTGACCCTGAGCTTTTCTTCAATCAGTGCTTCATCCAAAGGCTTGTCCCTGTC
TTACATCATCCAGCTCAGTGGACTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCC
AAGTTCACCTCTGCAGAGCTAATGAGGGAGTACATTTCGACCTGTGTCCCTGAACACACTCAAT
CCTTCAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGTGGGGAGATAACTTTCAAGGACTA
TCGGATGAGATACAGAGACAACACCCCTCTCGTTCTCGATGGGTTGAACCTGAACATCCAAAGC
GGGCAGACAGTTGGGATTGTGGGAAGAACGGGCTCTGGTAAATCATCACTGGGCATGGCCCTGT
TTCGTCTGGTGGAACCAGCCTCTGGCACCATCTTCATTGACGAGGTGGATATCTGCACTGTGGG
TCTGGAAGAGCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACA
GTAAGGTACAACTTGGATCCCTTGGGGAGTCACACCGACGAGATGCTCTGGCATGTTTTGGAGA
GAACATTCATGAGAGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAA
CGGGGAAAACTTCTCAGTAGGAGAACGCCAGCTGCTTTGTATGGCCCGGGCACTTCTCCGTAAT
TCAAAAATCATTCTCCTTGATGAAGCTACTGCCTCCATGGATTCCAAGACGGACACCCTTGTTC
AGAGCACCATAAAAGAGGCCTTCAAAAGCTGCACAGTGCTGACCATCGCTCATCGCCTAAACAC
TGTTCTCAACTGTGACCTTGTCCTGGTCATGGAAAATGGGAAGGTGCAGGAAGTTCTGGTGATT
GAGTTTGACAAGCCTGAAGTCCTCGCTGAGAAGCCTGACTCTGCATTTGCGATGTTACTAGCTG
CAGAAGTTGGACTGTAAAGGTCCCGTGGTTGGTTTGAGAGGAGACAATGGATGTGTGAGAGGAG
AAGCCTGAAGGTAGAGTCAAGCAGCCCTGGCCACAGCCCCTCCCACCCATGGAGCACAGGGTGA
GCTGGGGCTGAGATGTGTCCCTTGCCCTTCTGGTCACCTCCCTTGGCAGACTCAGGGTTAGTTC
TGGATGGTGAAGAATCCAGACAAAGCTGGGGGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCC
AAGGGTCCTCATGGTCCTCATCAATACTACATAATGCTCGAGAATGGGAACATTCTAACTTTCC
GTCCAAAAGCAGTAAAAGCGAATGAGATGGAAAATGCCCAAGGCTGGAGGTAACAGCGCTCCTC
GCTTTTGTTACCAGACAAGAGAGAAGGGTTTTCTTTCTGTTTAATTTCATTCCACTCTTAGCTA
ACTATGTGGCAAGCAGTAACCGCATAGATCTATAGCACGGAAGACTGGTGATAGTGTTTGGCAT
GAGATTTTTTTTTTCCAAAGAAATCATATTATATGTTACAGTTGATCTGTTAAAATAAGCAGAA
AGCAAAACACTGGGGTTTCTGAATAAATGACATTTTAATA

hide sequence

RefSeq Acc Id:

XM_008772376 ⟹ XP_008770598

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,550 - 36,793,999 (+)	NCBI
mRatBN7.2	19	20,549,298 - 20,620,761 (+)	NCBI
Rnor_6.0	19	21,541,326 - 21,612,757 (+)	NCBI

Sequence:

show sequence

AGGGGGAACACGGGGCCAAAAATGTACAGGGCCTAGAGTGACAGTACAGAGATGTAGGCATTGA
CCTCAGCTGGGCTGACCTGTGCTGGAGTCACTATGGGAGACCTCTGCTCTTCCGTTTCATCAAG
CAATGGGATGGGGGTTGGAGGAAGATTCATCTGCTCATAGGCAGTGGTATGCTGGGACAAGCTG
GAGGCAAGGCTAGGCCAACCTAGCCTTATGAGCTCCAACACTCACTGCAGGCGCCTGGTGTCCT
ACAGATCAGTCCTGGGATGGGGCAGTGCCCTTTAATGTGGGCCTGAGGGAATGTTGGCTCTCTC
AGAGTTCCCTCCTCAGGTGTGGTGGGAGTGGCAGTTGAATGGGGCAGTTGGAGAGGAGGGCTCC
CAGCAGGTGGGACAAGGGAAAGGAAACCTGAGGTCCACAGAGGAGGAAGCTAGAGTGAACGTGT
CTCAAAGCCAGGAGTCCAGGGCTCCAGAACACCATCAAGATGGTGGGCGAAGACCCGTACCTTA
TCTCAGACCTGGATCGCAGAGGCCGTCGGAGATCCTTTGCCGAGAGATATGATCCCAGCCTGAA
AACCATGATCCCAATGCGACCCTATGCAAGGCTGGCACCCAATCCTGTGGATGATGCGGGGCTG
CTGTCCTTCGCCACGTTTTCCTGGCTCACACCTGTGATGATTCGAAGTTACAAGCACACGCTGA
CCGTGGACACCCTGCCCCCACTATCTCCTTACGACTCATCGGATGTCAATGCCAAGAGACTCCA
AATCCTTTGGGATGAAGAAATAGAAAGGGTAGGGCCCGAGCGGGCCTCTTTGGGCCGTGTGGTT
TGGAAATTCCAGAGGACCCGTGTTCTGATGGATGTTGTAGCCAACATTCTCTGCATCATCATGG
CAGCCTTAGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCACGTTACCAACATCTCCTCCGG
ACACATCGGGATCAGCATCTGCTTGTGTCTGGCCCTTTTTGCCACCGAGTTTACCAAAGTCCTC
TTTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAGCGATTCGACTGAAGGTGGCCCTGTCCA
CGCTAATTTTCAAAAATCTGTTGTCCTTCAAGACATTAACCCACATCTCTGCAGGCGAGGTACT
CAATGTACTATCGAGTGATAGTTATTCCTTGTTTGAGGCTGCCTTGTTTTGTCCTTTGCCAGCC
ACCATCCCGATCCTAATGGTCGTTTGTGCCGTGTATGCCTTTTTCATTCTGGGGTCCACCGCTC
TTGTTGGGATATGCGTGTATCTCATATTCATCCCGATCCAGATGTTTATGGCCAAACTCAACTC
AGCTTTCCGAAGATCAGCAATTTCAGTGACAGACAAGCGGGTTCAGACAATGAATGAGTTTCTG
ACCTGCATCAAACTGATTAAAATGTATGCCTGGGAGAAATCTTTTATGAACACCATTCACGACA
TAAGAAAGAGAGAGAAAAAATTACTGGAAAAGGCTGGATACGTCCAAAGTGGGAACTCAGCCCT
GGCTCCCATAGTGTCTACCATAGCCATTGTGTCTACTTTCACCTGCCACATTTTCCTGAAACGC
ACACTCACTGCCCCTGTGGCATTTAGTGTGATTGCCATGTTTAATGTAATGAAGTTTTCAATTG
CAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGCCAGTGTCTCTCTAAGGAGAATGAAGAA
AATTCTTGTAGCTAAAAGTCCCCCATCCTACATCACCCAACCAGAAGACCCAGATACTATCTTG
CTTTTAGCAAATGCCACCCTGACATGGGAACAAGAAATCAACAGGAAAAGAGGCCCATTGAAGA
CACAAGATCAGAGAAGGCACGTTTTCAAGAAACAGAGGGCAGAGCTATACAGTGAGCAAAGTCT
CTCAGATCAGGGAGTTGCCAGCCCAGAGCGGCAAAGTGGCAGCCCCAAGTCAGTACTACACAAC
ATCAGCTTTGTGGTGAGAAAGGGAAAGGTCTTGGGGATATGCGGGAATGTTGGAAGCGGGAAGA
GTTCCCTCATTTCTGCTCTTCTAGGGCAGATGCAGTTACAGAAAGGGGTCGTGGCTGTCAGTGG
ACCTTTGGCTTATGTTTCTCAGCAAGCTTGGATCTTCCACGGAAATGTGAGGGAGAACATCCTG
TTTGGAGAGAAGTACAACCACCAAAGGTACCAACACACGGTTCATGTCTGTGGGCTCCAGAAGG
ATTTGAACAGCCTCCCTTATGGAGACCTGACTGAGTGCCATTATCCCCATCTACAGATTGGGGA
GCGGGGTGTGAACCTCTCCGGGGGACAGAGGCAGAGGATCAGCCTGGCCCGGGCTGTGTACGCC
AACCGTCAGCTCTACCTGCTGGATGACCCGCTCTCGGCAGTGGATGCCCATGTGGGGAAGCACG
TCTTTGAAGAATGCATTAAAAAGACACTCAAGGGGAAGACTGTGGTGCTGGTTACCCACCAGCT
GCAGTTCCTGGAGTCTTGCGATGAGGTCATTCTGTTAGAAGATGGAGAGATCTGTGAAAAGGGC
ACCCACAAGGAGTTGATGGAAGAGAGAGGCCGCTATGCAAAGCTGATCCACAACCTCAGGGGAC
TGCAATTCAAGGATCCAGAGCACATTTACAATGTAGCCATGGTGGAGACCCTGAAGGAGAGCCA
AGCTCAAAGGGATGAAGACGCTGTCTTGGCTTCAGGAGATGAGAGAGATGAAGGAAAAGAACCC
GAGACAGAAGAATTTGTGGACATAAAAGCTCCCGTGCACCAGCTCATCCAGATTGAATCCCCCC
AAGAAGGAATCGTGACCTGGAAAACATATCACACGTATATTAAAGCTTCTGGAGGGTACCTGGT
CTCCTTCCTGGTTTTGTGTCTCTTCTTCCTGATGATGGGCAGCTCTGCCTTCAGCACCTGGTGG
CTGGGGCTCTGGTTGGACAGTGGCTCCCAGGTCATCTGTGCACCCCAGAGCAATGAGACAGCCT
GCAACGTTAACCAGACGCTGCAGGACACCAAACACCACATGTACCAGTTGGTTTACATAGCAAG
CATGATGTCTGTGCTGACGTTTGGCATCATCAAAGGCTTCACCTTCACCAACACGACACTGATG
GCGTCCTCCTCCCTCCACAACAGAGTGTTTAACAAGATCGTCAGCAGCCCAATGAGCTTCTTTG
ACACGACTCCCACAGGCCGGCTAATGAACCGCTTTTCTAAAGATATGGATGAGCTAGATGTGAG
GCTGCCATTTCACGCTGAGAATTTTTTGCAGCAGTTTTCTATGGTGGTGTTTATTCTGGTGATT
ATGGCTGCCTCGTTTCCTGTTGTCCTCGTGGTGCTGGCTGGCCTGGCTATTCTCTTCTTCATCC
TTTTACGCATTTTCCATCGAGGGGTGCAGGAGCTCAAGCAGGTGGAGAACATCAGCCGGTCCCC
TTGGTTCTCTCACATCACCTCCTCCATGCAGGGTCTGGGTGTCATCCATGCCTACGACAAAAAG
GACGATTGCATAAGCAAGTTTAAGGCGCTCAATGATGAAAACTCCAGCCACCTCTTGTACTTTA
ACTGTGCACTCAGGTGGTTTGCTCTCAGAATGGACATCCTCATGAACATCGTCACCTTTGTCGT
GGCCTTGCTGGTGACCCTGAGCTTTTCTTCAATCAGTGCTTCATCCAAAGGCTTGTCCCTGTCT
TACATCATCCAGCTCAGTGGACTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCA
AGTTCACCTCTGCAGAGCTAATGAGGGAGTACATTTCGACCTGTGTCCCTGAACACACTCAATC
CTTCAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGTGGGGAGATAACTTTCAAGGACTAT
CGGATGAGATACAGAGACAACACCCCTCTCGTTCTCGATGGGTTGAACCTGAACATCCAAAGCG
GGCAGACAGTTGGGATTGTGGGAAGAACGGGCTCTGGTAAATCATCACTGGGCATGGCCCTGTT
TCGTCTGGTGGAACCAGCCTCTGGCACCATCTTCATTGACGAGGTGGATATCTGCACTGTGGGT
CTGGAAGAGCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAG
TAAGGTACAACTTGGATCCCTTGGGGAGTCACACCGACGAGATGCTCTGGCATGTTTTGGAGAG
AACATTCATGAGAGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAAC
GGGGAAAACTTCTCAGTAGGAGAACGCCAGCTGCTTTGTATGGCCCGGGCACTTCTCCGTAATT
CAAAAATCATTCTCCTTGATGAAGCTACTGCCTCCATGGATTCCAAGACGGACACCCTTGTTCA
GAGCACCATAAAAGAGGCCTTCAAAAGCTGCACAGTGCTGACCATCGCTCATCGCCTAAACACT
GTTCTCAACTGTGACCTTGTCCTGGTCATGGAAAATGGGAAGGTGATTGAGTTTGACAAGCCTG
AAGTCCTCGCTGAGAAGCCTGACTCTGCATTTGCGATGTTACTAGCTGCAGAAGTTGGACTGTA
AAGGTCCCGTGGTTGGTTTGAGAGGAGACAATGGATGTGTGAGAGGAGAAGCCTGAAGGTAGAG
TCAAGCAGCCCTGGCCACAGCCCCTCCCACCCATGGAGCACAGGGTGAGCTGGGGCTGAGATGT
GTCCCTTGCCCTTCTGGTCACCTCCCTTGGCAGACTCAGGGTTAGTTCTGGATGGTGAAGAATC
CAGACAAAGCTGGGGGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCTCATGGTC
CTCATCAATACTACATAATGCTCGAGAATGGGAACATTCTAACTTTCCGTCCAAAAGCAGTAAA
AGCGAATGAGATGGAAAATGCCCAAGGCTGGAGGTAACAGCGCTCCTCGCTTTTGTTACCAGAC
AAGAGAGAAGGGTTTTCTTTCTGTTTAATTTCATTCCACTCTTAGCTAACTATGTGGCAAGCAG
TAACCGCATAGATCTATAGCACGGAAGACTGGTGATAGTGTTTGGCATGAGATTTTTTTTTTCC
AAAGAAATCATATTATATGTTACAGTTGATCTGTTAAAATAAGCAGAAAGCAAAACACTGGGGT
TTCTGAATAAATGACATTTTAATA

hide sequence

RefSeq Acc Id:

XM_039097573 ⟹ XP_038953501

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,550 - 36,793,999 (+)	NCBI
mRatBN7.2	19	20,549,298 - 20,620,761 (+)	NCBI

RefSeq Acc Id:

XM_039097575 ⟹ XP_038953503

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,550 - 36,781,518 (+)	NCBI
mRatBN7.2	19	20,549,298 - 20,608,278 (+)	NCBI

RefSeq Acc Id:

XM_039097576 ⟹ XP_038953504

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,550 - 36,781,565 (+)	NCBI
mRatBN7.2	19	20,549,298 - 20,608,330 (+)	NCBI

RefSeq Acc Id:

XM_039097577 ⟹ XP_038953505

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,745,450 - 36,793,999 (+)	NCBI
mRatBN7.2	19	20,572,205 - 20,620,761 (+)	NCBI

RefSeq Acc Id:

XM_063277869 ⟹ XP_063133939

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,735,581 - 36,793,999 (+)	NCBI

RefSeq Acc Id:

XM_063277870 ⟹ XP_063133940

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,738,641 - 36,793,999 (+)	NCBI

RefSeq Acc Id:

XR_005496627

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,550 - 36,798,868 (+)	NCBI
mRatBN7.2	19	20,549,298 - 20,621,991 (+)	NCBI

RefSeq Acc Id:

XR_005496628

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	36,722,550 - 36,793,021 (+)	NCBI
mRatBN7.2	19	20,549,298 - 20,619,790 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_955409	(Get FASTA)	NCBI Sequence Viewer
	XP_006255303	(Get FASTA)	NCBI Sequence Viewer
	XP_008770597	(Get FASTA)	NCBI Sequence Viewer
	XP_008770598	(Get FASTA)	NCBI Sequence Viewer
	XP_038953501	(Get FASTA)	NCBI Sequence Viewer
	XP_038953503	(Get FASTA)	NCBI Sequence Viewer
	XP_038953504	(Get FASTA)	NCBI Sequence Viewer
	XP_038953505	(Get FASTA)	NCBI Sequence Viewer
	XP_063133939	(Get FASTA)	NCBI Sequence Viewer
	XP_063133940	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAO74586	(Get FASTA)	NCBI Sequence Viewer
	AAO74587	(Get FASTA)	NCBI Sequence Viewer
	EDL87501	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021095
	ENSRNOP00000044842
GenBank Protein	Q6Y306	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_955409 ⟸ NM_199377

- UniProtKB:

Q6Y305 (UniProtKB/Swiss-Prot), Q6Y306 (UniProtKB/Swiss-Prot), D3ZIZ6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVGEDPYLISDLDRRGRRRSFAERYDPSLKTMIPMRPYARLAPNPVDDAGLLSFATFSWLTPVM
IRSYKHTLTVDTLPPLSPYDSSDVNAKRLQILWDEEIERVGPERASLGRVVWKFQRTRVLMDVV
ANILCIIMAALGPTVLIHQILQHVTNISSGHIGISICLCLALFATEFTKVLFRALAWAINYRTA
IRLKVALSTLIFKNLLSFKTLTHISAGEVLNVLSSDSYSLFEAALFCPLPATIPILMVVCAVYA
FFILGSTALVGICVYLIFIPIQMFMAKLNSAFRRSAISVTDKRVQTMNEFLTCIKLIKMYAWEK
SFMNTIHDIRKREKKLLEKAGYVQSGNSALAPIVSTIAIVSTFTCHIFLKRTLTAPVAFSVIAM
FNVMKFSIAILPFSVKAVAEASVSLRRMKKILVAKSPPSYITQPEDPDTILLLANATLTWEQEI
NRKRGPSKTQDQRRHVFKKQRAELYSEQSLSDQGVASPERQSGSPKSVLHNISFVVRKGKVLGI
CGNVGSGKSSLISALLGQMQLQKGVVAASGPLAYVSQQAWIFHGNVRENILFGEKYNHQRYQHT
VHVCGLQKDLNSLPYGDLTEIGERGVNLSGGQRQRISLARAVYANRQLYLLDDPLSAVDAHVGK
HVFEECIKKTLKGKTVVLVTHQLQFLESCDEVILLEDGEICEKGTHKELMEERGRYAKLIHNLR
GLQFKDPEHIYNVAMVETLKESQAQRDEDAVLASGDERDEGKEPETEEFVDIKAPVHQLIQIES
PQEGIVTWKTYHTYIKASGGYLVSFLVLCLFFLMMGSSAFSTWWLGLWLDSGSQVICAPQSNET
ACNVNQTLQDTKHHMYQLVYIASMMSVLTFGIIKGFTFTNTTLMASSSLHNRVFNKIVSSPMSF
FDTTPTGRLMNRFSKDMDELDVRLPFHAENFLQQFSMVVFILVIMAASFPVVLVVLAGLAILFF
ILLRIFHRGVQELKQVENISRSPWFSHITSSMQGLGVIHAYDKKDDCISKFKALNDENSSHLLY
FNCALRWFALRMDILMNIVTFVVALLVTLSFSSISASSKGLSLSYIIQLSGLLQVCVRTGTETQ
AKFTSAELMREYISTCVPEHTQSFKVGTCPKDWPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQ
SGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICTVGLEELRTKLTMIPQDPVLFVG
TVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLR
NSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHRLNTVLNCDLVLVMENGKVIEFDK
PEVLAEKPDSAFAMLLAAEVGL

hide sequence

RefSeq Acc Id:	XP_006255303 ⟸ XM_006255241
- Peptide Label:	isoform X3
- UniProtKB:	D3ZIZ6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVGEDPYLISDLDRRGRRRSFAERYDPSLKTMIPMRPYARLAPNPVDDAGLLSFATFSWLTPVM IRSYKHTLTVDTLPPLSPYDSSDVNAKRLQILWDEEIERVGPERASLGRVVWKFQRTRVLMDVV ANILCIIMAALGPTVLIHQILQHVTNISSGHIGISICLCLALFATEFTKVLFWALAWAINYRTA IRLKVALSTLIFKNLLSFKTLTHISAGEVLNVLSSDSYSLFEAALFCPLPATIPILMVVCAVYA FFILGSTALVGICVYLIFIPIQMFMAKLNSAFRRSAISVTDKRVQTMNEFLTCIKLIKMYAWEK SFMNTIHDIRKREKKLLEKAGYVQSGNSALAPIVSTIAIVSTFTCHIFLKRTLTAPVAFSVIAM FNVMKFSIAILPFSVKAVAEASVSLRRMKKILVAKSPPSYITQPEDPDTILLLANATLTWEQEI NRKRGPLKTQDQRRHVFKKQRAELYSEQSLSDQGVASPERQSGSPKSVLHNISFVVRKGKVLGI CGNVGSGKSSLISALLGQMQLQKGVVAVSGPLAYVSQQAWIFHGNVRENILFGEKYNHQRYQHT VHVCGLQKDLNSLPYGDLTEIGERGVNLSGGQRQRISLARAVYANRQLYLLDDPLSAVDAHVGK HVFEECIKKTLKGKTVVLVTHQLQFLESCDEVILLEDGEICEKGTHKELMEERGRYAKLIHNLR GLQFKDPEHIYNVAMVETLKESQAQRDEDAVLASGDERDEGKEPETEEFVDIKAPVHQLIQIES PQEGIVTWKTYHTYIKASGGYLVSFLVLCLFFLMMGSSAFSTWWLGLWLDSGSQVICAPQSNET ACNVNQTLQDTKHHMYQLVYIASMMSVLTFGIIKGFTFTNTTLMASSSLHNRVFNKIVSSPMSF FDTTPTGRLMNRFSKDMDELDVRLPFHAENFLQQFSMVVFILVIMAASFPVVLVVLAGLAILFF ILLRIFHRGVQELKQVENISRSPWFSHITSSMQGLGVIHAYDKKDDCISKFKALNDENSSHLLY FNCALRWFALRMDILMNIVTFVVALLVTLSFSSISASSKGLSLSYIIQLSGLLQVCVRTGTETQ AKFTSAELMREYISTCVPEHTQSFKVGTCPKDWPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQ SGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICTVGLEELRTKLTMIPQDPVLFVG TVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLR NSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHRLNTVLNCDLVLVMENGKVQEVLV IEFDKPEVLAEKPDSAFAMLLAAEVGL hide sequence

RefSeq Acc Id:	XP_008770597 ⟸ XM_008772375
- Peptide Label:	isoform X1
- UniProtKB:	D3ZIZ6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVGEDPYLISDLDRRGRRRSFAERYDPSLKTMIPMRPYARLAPNPVDDAGLLSFATFSWLTPVM IRSYKHTLTVDTLPPLSPYDSSDVNAKRLQILWDEEIERVGPERASLGRVVWKFQRTRVLMDVV ANILCIIMAALGPTVLIHQILQHVTNISSGHIGISICLCLALFATEFTKVLFWALAWAINYRTA IRLKVALSTLIFKNLLSFKTLTHISAGEVLNVLSSDSYSLFEAALFCPLPATIPILMVVCAVYA FFILGSTALVGICVYLIFIPIQMFMAKLNSAFRRSAISVTDKRVQTMNEFLTCIKLIKMYAWEK SFMNTIHDIRKREKKLLEKAGYVQSGNSALAPIVSTIAIVSTFTCHIFLKRTLTAPVAFSVIAM FNVMKFSIAILPFSVKAVAEASVSLRRMKKILVAKSPPSYITQPEDPDTILLLANATLTWEQEI NRKRGPLKTQDQRRHVFKKQRAELYSEQSLSDQGVASPERQSGSPKSVLHNISFVVRKGKVLGI CGNVGSGKSSLISALLGQMQLQKGVVAVSGPLAYVSQQAWIFHGNVRENILFGEKYNHQRYQHT VHVCGLQKDLNSLPYGDLTECHYPHLQIGERGVNLSGGQRQRISLARAVYANRQLYLLDDPLSA VDAHVGKHVFEECIKKTLKGKTVVLVTHQLQFLESCDEVILLEDGEICEKGTHKELMEERGRYA KLIHNLRGLQFKDPEHIYNVAMVETLKESQAQRDEDAVLASGDERDEGKEPETEEFVDIKAPVH QLIQIESPQEGIVTWKTYHTYIKASGGYLVSFLVLCLFFLMMGSSAFSTWWLGLWLDSGSQVIC APQSNETACNVNQTLQDTKHHMYQLVYIASMMSVLTFGIIKGFTFTNTTLMASSSLHNRVFNKI VSSPMSFFDTTPTGRLMNRFSKDMDELDVRLPFHAENFLQQFSMVVFILVIMAASFPVVLVVLA GLAILFFILLRIFHRGVQELKQVENISRSPWFSHITSSMQGLGVIHAYDKKDDCISKFKALNDE NSSHLLYFNCALRWFALRMDILMNIVTFVVALLVTLSFSSISASSKGLSLSYIIQLSGLLQVCV RTGTETQAKFTSAELMREYISTCVPEHTQSFKVGTCPKDWPSRGEITFKDYRMRYRDNTPLVLD GLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICTVGLEELRTKLTMIPQ DPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLC MARALLRNSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHRLNTVLNCDLVLVMENG KVQEVLVIEFDKPEVLAEKPDSAFAMLLAAEVGL hide sequence

RefSeq Acc Id:	XP_008770598 ⟸ XM_008772376
- Peptide Label:	isoform X2
- UniProtKB:	D3ZIZ6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVGEDPYLISDLDRRGRRRSFAERYDPSLKTMIPMRPYARLAPNPVDDAGLLSFATFSWLTPVM IRSYKHTLTVDTLPPLSPYDSSDVNAKRLQILWDEEIERVGPERASLGRVVWKFQRTRVLMDVV ANILCIIMAALGPTVLIHQILQHVTNISSGHIGISICLCLALFATEFTKVLFWALAWAINYRTA IRLKVALSTLIFKNLLSFKTLTHISAGEVLNVLSSDSYSLFEAALFCPLPATIPILMVVCAVYA FFILGSTALVGICVYLIFIPIQMFMAKLNSAFRRSAISVTDKRVQTMNEFLTCIKLIKMYAWEK SFMNTIHDIRKREKKLLEKAGYVQSGNSALAPIVSTIAIVSTFTCHIFLKRTLTAPVAFSVIAM FNVMKFSIAILPFSVKAVAEASVSLRRMKKILVAKSPPSYITQPEDPDTILLLANATLTWEQEI NRKRGPLKTQDQRRHVFKKQRAELYSEQSLSDQGVASPERQSGSPKSVLHNISFVVRKGKVLGI CGNVGSGKSSLISALLGQMQLQKGVVAVSGPLAYVSQQAWIFHGNVRENILFGEKYNHQRYQHT VHVCGLQKDLNSLPYGDLTECHYPHLQIGERGVNLSGGQRQRISLARAVYANRQLYLLDDPLSA VDAHVGKHVFEECIKKTLKGKTVVLVTHQLQFLESCDEVILLEDGEICEKGTHKELMEERGRYA KLIHNLRGLQFKDPEHIYNVAMVETLKESQAQRDEDAVLASGDERDEGKEPETEEFVDIKAPVH QLIQIESPQEGIVTWKTYHTYIKASGGYLVSFLVLCLFFLMMGSSAFSTWWLGLWLDSGSQVIC APQSNETACNVNQTLQDTKHHMYQLVYIASMMSVLTFGIIKGFTFTNTTLMASSSLHNRVFNKI VSSPMSFFDTTPTGRLMNRFSKDMDELDVRLPFHAENFLQQFSMVVFILVIMAASFPVVLVVLA GLAILFFILLRIFHRGVQELKQVENISRSPWFSHITSSMQGLGVIHAYDKKDDCISKFKALNDE NSSHLLYFNCALRWFALRMDILMNIVTFVVALLVTLSFSSISASSKGLSLSYIIQLSGLLQVCV RTGTETQAKFTSAELMREYISTCVPEHTQSFKVGTCPKDWPSRGEITFKDYRMRYRDNTPLVLD GLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICTVGLEELRTKLTMIPQ DPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLC MARALLRNSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHRLNTVLNCDLVLVMENG KVIEFDKPEVLAEKPDSAFAMLLAAEVGL hide sequence

Ensembl Acc Id:

ENSRNOP00000021095 ⟸ ENSRNOT00000021095

Ensembl Acc Id:

ENSRNOP00000044842 ⟸ ENSRNOT00000042077

RefSeq Acc Id:	XP_038953501 ⟸ XM_039097573
- Peptide Label:	isoform X4
- UniProtKB:	D3ZIZ6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038953504 ⟸ XM_039097576
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038953503 ⟸ XM_039097575
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038953505 ⟸ XM_039097577
- Peptide Label:	isoform X8
- UniProtKB:	A6KDC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063133939 ⟸ XM_063277869
- Peptide Label:	isoform X5
- UniProtKB:	A6KDC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063133940 ⟸ XM_063277870
- Peptide Label:	isoform X7
- UniProtKB:	A6KDC5 (UniProtKB/TrEMBL)

Protein Domains

ABC transmembrane type-1 ABC transporter

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6Y306-F1-model_v2	AlphaFold	Q6Y306	1-1366	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700987

Promoter ID:

EPDNEW_R11510

Type:

single initiation site

Name:

Abcc12_1

Description:

ATP binding cassette subfamily C member 12

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	19	21,541,691 - 21,541,751	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:735100	AgrOrtholog
BioCyc Gene	G2FUF-6226	BioCyc
Ensembl Genes	ENSRNOG00000015666	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000021095	ENTREZGENE
	ENSRNOT00000042077	ENTREZGENE
Gene3D-CATH	1.20.1560.10	UniProtKB/Swiss-Prot
	3.40.50.300	UniProtKB/Swiss-Prot
InterPro	AAA+_ATPase	UniProtKB/Swiss-Prot
	ABC1_TM_dom	UniProtKB/Swiss-Prot
	ABC1_TM_sf	UniProtKB/Swiss-Prot
	ABC_transporter-like	UniProtKB/Swiss-Prot
	ABC_transporter_C	UniProtKB/Swiss-Prot
	ABC_transporter_CS	UniProtKB/Swiss-Prot
	P-loop_NTPase	UniProtKB/Swiss-Prot
KEGG Report	rno:291923	UniProtKB/Swiss-Prot
NCBI Gene	291923	ENTREZGENE
PANTHER	ATP-BINDING CASSETTE SUB-FAMILY C	UniProtKB/Swiss-Prot
	PTHR24223:SF10	UniProtKB/Swiss-Prot
Pfam	ABC_membrane	UniProtKB/Swiss-Prot
	ABC_tran	UniProtKB/Swiss-Prot
PhenoGen	Abcc12	PhenoGen
PROSITE	ABC_TM1F	UniProtKB/Swiss-Prot
	ABC_TRANSPORTER_1	UniProtKB/Swiss-Prot
	ABC_TRANSPORTER_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000015666	RatGTEx
SMART	AAA	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot
	SSF90123	UniProtKB/Swiss-Prot
UniProt	A6KDC5	ENTREZGENE, UniProtKB/TrEMBL
	D3ZIZ6	ENTREZGENE, UniProtKB/TrEMBL
	F1M7G9_RAT	UniProtKB/TrEMBL
	MRP9_RAT	UniProtKB/Swiss-Prot
	Q6Y305	ENTREZGENE
	Q6Y306	ENTREZGENE
UniProt Secondary	Q6Y305	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-12-09	Abcc12	ATP binding cassette subfamily C member 12	Abcc12	ATP-binding cassette, subfamily C (CFTR/MRP), member 12	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-11-16	Abcc12	ATP-binding cassette, subfamily C (CFTR/MRP), member 12	Abcc12	ATP-binding cassette, sub-family C (CFTR/MRP), member 12	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Abcc12	ATP-binding cassette, sub-family C (CFTR/MRP), member 12		ATP-binding cassette protein C12	Name updated	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations