RH133410 Marker Search Result - Rat Genome Database

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Marker: RH133410

Symbol: RH133410
Previously known as: AA955115; 
RGD ID: 5049316
Expected Size: 182 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21922,592,007 - 22,592,189 (+)MAPPERmRatBN7.2
mRatBN7.21913,911,691 - 13,911,873 (+)MAPPERmRatBN7.2
Rnor_6.01915,239,484 - 15,239,665NCBIRnor6.0
Rnor_5.01926,336,763 - 26,336,944UniSTSRnor5.0
RGSC_v3.41914,966,739 - 14,966,920UniSTSRGSC3.4
Celera1913,843,325 - 13,843,506UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map19p11UniSTS
Is Marker For: Genes:   Ces1d   Ces1dl1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GTTCTCAAACATGGCTGACCCT
Reverse Primer GGCCAGAATATGACCAGAAGGA
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
70896Ces1dcarboxylesterase 1D191387349013912035Rat
2571Ces1ccarboxylesterase 1C191392640113955527Rat
1583671Ces1acarboxylesterase 1A191395952913986370Rat
621822Slc6a2solute carrier family 6 member 2191401029214055317Rat
2325051Lpcat2lysophosphatidylcholine acyltransferase 2191408838914152742Rat
1583620Capns2calpain, small subunit 2191410433414105276Rat
621316Mmp2matrix metallopeptidase 2191415465714182870Rat
41251642LOC120098544uncharacterized LOC120098544191418294614187957Rat
40944742LOC120098590uncharacterized LOC120098590191418845714198236Rat
11410986LOC108348898uncharacterized LOC108348898191420786414223664Rat
41362713LOC120098597uncharacterized LOC120098597191423314514238604Rat
1564830Irx6iroquois homeobox 6191433044014336403Rat
41303095LOC120098515uncharacterized LOC120098515191457940014587212Rat
1565518Irx5iroquois homeobox 5191463905214643911Rat
10398753Crndecolorectal neoplasia differentially expressed191464388714653880Rat
11438506Trnas-aga11transfer RNA serine (anticodon AGA) 11191469978714699867Rat
9415173LOC103694293FUN14 domain-containing protein 2 pseudogene191470626414706743Rat
40945959LOC120098593uncharacterized LOC120098593191488138814897369Rat
7497501LOC102555119uncharacterized LOC102555119191501392515018390Rat
1307424Irx3iroquois homeobox 3191521188215215317Rat
1305121FtoFTO, alpha-ketoglutarate dependent dioxygenase191528489815692142Rat
7661148LOC102556484uncharacterized LOC102556484191530716315311101Rat
1311099Rpgrip1lRpgrip1-like191569218915785083Rat
1311170AktipAKT interacting protein191586681115877123Rat
3541Rbl2RB transcriptional corepressor like 2191587685215923632Rat
41323723LOC120098695small nucleolar RNA SNORA17191593431215934444Rat
1306795Chd9chromodomain helicase DNA binding protein 9191594153516146220Rat
11448883LOC108348876U1 small nuclear ribonucleoprotein C pseudogene191595711915960185Rat
1593026Mif-ps3macrophage migration inhibitory factor, pseudogene 3191626166116263204Rat
11478525LOC108348902uncharacterized LOC108348902191649266416500151Rat
11362355LOC108348901uncharacterized LOC108348901191650019716516868Rat
1591794Ldha-ps22lactate dehydrogenase A, pseudogene 22191653834216539830Rat
41023938LOC120098523uncharacterized LOC120098523191659814016642551Rat
1311529Tox3TOX high mobility group box family member 3191664833816757151Rat
7542010LOC102549475uncharacterized LOC102549475191700136617025361Rat
7532016LOC102549581uncharacterized LOC102549581191722091617225036Rat
40937786LOC120098536uncharacterized LOC120098536191722538217232395Rat
41254820LOC120098502uncharacterized LOC120098502191729079017291512Rat
41366286LOC120098701small nucleolar RNA SNORA17191735007517350206Rat
40952774LOC120098500uncharacterized LOC120098500191745648017457299Rat
7678927LOC102553117uncharacterized LOC102553117191745682517471003Rat
41111973LOC120098514uncharacterized LOC120098514191755814117583832Rat
41396074LOC120098563uncharacterized LOC120098563191759007517607147Rat
9301627LOC103694298uncharacterized LOC103694298191770945517769586Rat
7597669LOC102553444uncharacterized LOC102553444191786762617901672Rat
41064998Trnap-agg28transfer RNA proline (anticodon AGG) 28191792765617927730Rat
7738559LOC102553576uncharacterized LOC102553576191794803918008876Rat
1309916Sall1spalt-like transcription factor 1191800578218022705Rat
7505565LOC102557216uncharacterized LOC102557216191827991618287521Rat
1308346CyldCYLD lysine 63 deubiquitinase191831063218373696Rat
6491014Npm1-ps2nucleophosmin 1, pseudogene 2191833904218339497Rat
41168625LOC120098599uncharacterized LOC120098599191837558018379594Rat
1306368Nod2nucleotide-binding oligomerization domain containing 2191838236918422817Rat
1307787Snx20sorting nexin 20191843593518445108Rat
1308491Nkd1NKD inhibitor of WNT signaling pathway 1191847634418549380Rat
41024705LOC120098503uncharacterized LOC120098503191869833118710027Rat
1309891Brd7bromodomain containing 7191870879218737497Rat
619966Adcy7adenylate cyclase 7191874087518798924Rat
1309587Tent4bterminal nucleotidyltransferase 4B191880761618868969Rat
1308267Heatr3HEAT repeat containing 3191889247718930502Rat
1308816Cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1191893263118947667Rat
11438483LOC108348906uncharacterized LOC108348906191893444518941602Rat
1587042Mrto4-ps7mRNA turnover 4, ribosome maturation factor, pseudogene 7191904060819041095Rat
41104662LOC120098652basic proline-rich protein-like191910796619110624Rat
621664Zfp423zinc finger protein 423191911121319407373Rat
40998408LOC120098541uncharacterized LOC120098541191941918819443773Rat
1585876C19h16orf78similar to human chromosome 16 open reading frame 78191948424819509632Rat
7646717LOC102551322uncharacterized LOC102551322191950545119550814Rat
1562813Cbln1cerebellin 1 precursor191960876319612572Rat
41306472LOC120098531uncharacterized LOC120098531191977859619788806Rat
7602258LOC102551515uncharacterized LOC102551515191978886119800730Rat
1587310Ybx1-ps23Y box binding protein 1, pseudogene 23191984957919851101Rat
11375248LOC10834896660S ribosomal protein L29 pseudogene191985805419858524Rat
41252508Glul-ps2glutamate-ammonia ligase, pseudogene 2191986461719865783Rat
41373433LOC120098553uncharacterized LOC120098553191999827520000323Rat
1585808Rpl19-ps19ribosomal protein L19, pseudogene 19192003475320035336Rat
1585793Rps15a-ps3ribosomal protein S15a, pseudogene 3192005394420054336Rat
2321146Abhd10-ps1abhydrolase domain containing 10, depalmitoylase, pseudogene 1192005483620055779Rat
1587309Rpl36-ps5ribosomal protein L36, pseudogene192007053220070891Rat
41224445LOC120098692small nucleolar RNA SNORA17192013072520130852Rat
2321096Cct3-ps5chaperonin containing TCP1 subunit 3, pseudogene 5192014643420148027Rat
41320463LOC120098595uncharacterized LOC120098595192018968520195690Rat
1305179N4bp1Nedd4 binding protein 1192022281120273570Rat
7637652LOC102547741uncharacterized LOC102547741192035841420365813Rat
620449Siah1siah E3 ubiquitin protein ligase 1192037890820402512Rat
1305466Lonp2lon peptidase 2, peroxisomal192040747520498985Rat
41215232LOC120098751U6 spliceosomal RNA192046621920466325Rat
735100Abcc12ATP binding cassette subfamily C member 12192054929820621991Rat
2324816Npm1-ps18nucleophosmin 1, pseudogene 18192078548520786466Rat
41268452LOC120098533uncharacterized LOC120098533192080090120808057Rat
41214423LOC120098690small nucleolar RNA SNORA17192088486820884995Rat
620186Phkbphosphorylase kinase regulatory subunit beta192101371921210671Rat
619898Itfg1integrin alpha FG-GAP repeat containing 1192121069721331285Rat
41323917LOC120098702small nucleolar RNA SNORA17192126084921260963Rat
1305310Neto2neuropilin and tolloid like 2192134429921415524Rat
71001Dnaja2DnaJ heat shock protein family (Hsp40) member A2192149779221516904Rat
1305462Gpt2glutamic--pyruvic transaminase 2192152680021561314Rat
7714102LOC102548349uncharacterized LOC102548349192154702121554142Rat
41276456LOC120098665uncharacterized LOC120098665192158988221626464Rat
1308706C19h16orf87similar to human chromosome 16 open reading frame 87192162639021653869Rat
7642644Rps11-ps2ribosomal protein S11, pseudogene 2192167532621675840Rat
1305801Mylk3myosin light chain kinase 3192168508521743587Rat
1311437Orc6origin recognition complex, subunit 6192175786721765638Rat
1589784Vps35VPS35 retromer complex component192176577121801620Rat
41258260LOC120098671U6 spliceosomal RNA192178002821780125Rat
9272283LOC103694302mitogen-activated protein kinase 4 pseudogene192181819721820544Rat
1333226Or7c19olfactory receptor family 7 subfamily C member 19192183241321834841Rat
41292314Ppp1cb-ps5protein phosphatase 1 catalytic subunit beta, pseudogene 5192184416921935356Rat
1587786Speer4cl1spermatogenesis associated glutamate (E)-rich protein 4C like 1192190971921937396Rat
7680597Iqcml1IQ motif containing M like 1192194104622072466Rat
1592207Septin7-ps5septin 7, pseudogene 5192203073022033259Rat
41391415LOC120098737small nucleolar RNA U3192215375522153962Rat
6500925LOC100909916trafficking protein particle complex subunit 2-like protein-like192217032722170897Rat
11447015Dlg5l10discs large MAGUK scaffold protein 5 like 10192218490522189682Rat
7746684LOC102550225septin-7-like192229721722299537Rat
1584830Dlg5l15discs large MAGUK scaffold protein 5 like 15192236565222370450Rat
41392794LOC120098507igE-binding protein-like192238051822381798Rat
1596406Speer4cl2spermatogenesis associated glutamate (E)-rich protein 4C like 2192239534322439432Rat
41257688Zc3hav1-ps8zinc finger CCCH-type containing, antiviral 1, pseudogene 8192239588322397692Rat
41070523Ppp1cb-ps3protein phosphatase 1 catalytic subunit beta, pseudogene 3192245184522454193Rat
2318841Zc3hav1-ps1zinc finger CCCH-type containing, antiviral 1, pseudogene 1192245731422458889Rat
7544409Dlg5l6discs large MAGUK scaffold protein 5 like 6192247128722475693Rat
1562660Dlg5l16discs large MAGUK scaffold protein 5 like 16192250949722513925Rat
1359640Ces1dl1carboxylesterase 1D like 1192256068522592355Rat



QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032318023069265Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 113902 UniSTS
  291863 UniSTS
UniSTS 216693 UniSTS