Symbol:
Ctu2
Name:
cytosolic thiouridylase subunit 2
RGD ID:
1562594
Description:
Predicted to enable sulfurtransferase activity. Predicted to be involved in tRNA wobble position uridine thiolation. Predicted to be located in cytoplasm. Predicted to be part of protein-containing complex. Predicted to be active in cytosol. Orthologous to human CTU2 (cytosolic thiouridylase subunit 2); INTERACTS WITH bisphenol A; Soman; tetrachloromethane.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
cytoplasmic tRNA 2-thiolation protein 2; cytosolic thiouridylase subunit 2 homolog; cytosolic thiouridylase subunit 2 homolog (S. pombe); LOC292069; MGC125094; Ncs2; similar to RIKEN cDNA 2310061F22
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 19 67,447,762 - 67,453,169 (+) NCBI GRCr8 mRatBN7.2 19 50,539,184 - 50,544,629 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 19 50,539,352 - 50,544,623 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 19 57,334,554 - 57,339,522 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 19 58,014,331 - 58,019,558 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 19 60,233,177 - 60,238,145 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 19 55,300,531 - 55,305,543 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 19 55,300,395 - 55,305,702 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 19 66,009,931 - 66,014,988 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 19 52,765,786 - 52,771,016 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 19 49,778,881 - 49,784,108 (+) NCBI Celera Cytogenetic Map 19 q12 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Ctu2 Rat 1,2-dimethylhydrazine multiple interactions ISO RGD:1551092 6480464 Folic Acid inhibits the reaction [1,2-Dimethylhydrazine results in increased expression of CTU2 mRNA] CTD PMID:22206623 Ctu2 Rat 1,2-dimethylhydrazine increases expression ISO RGD:1551092 6480464 1,2-Dimethylhydrazine results in increased expression of CTU2 mRNA CTD PMID:22206623 Ctu2 Rat 17beta-estradiol increases expression ISO RGD:1551092 6480464 Estradiol results in increased expression of CTU2 mRNA CTD PMID:39298647 Ctu2 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO RGD:1604165 6480464 Tetrachlorodibenzodioxin results in decreased expression of CTU2 mRNA CTD PMID:21632981 Ctu2 Rat 4,4'-sulfonyldiphenol increases expression ISO RGD:1551092 6480464 bisphenol S results in increased expression of CTU2 mRNA CTD PMID:39298647 Ctu2 Rat 4,4'-sulfonyldiphenol decreases methylation ISO RGD:1551092 6480464 bisphenol S results in decreased methylation of CTU2 exon CTD PMID:33297965 Ctu2 Rat 4,4'-sulfonyldiphenol decreases methylation ISO RGD:1604165 6480464 bisphenol S results in decreased methylation of CTU2 gene CTD PMID:31601247 Ctu2 Rat acrylamide decreases expression ISO RGD:1604165 6480464 Acrylamide results in decreased expression of CTU2 mRNA CTD PMID:32763439 Ctu2 Rat Aflatoxin B2 alpha decreases methylation ISO RGD:1604165 6480464 aflatoxin B2 results in decreased methylation of CTU2 intron CTD PMID:30157460 Ctu2 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of CTU2 mRNA CTD PMID:25181051|PMID:34947998 Ctu2 Rat bisphenol A decreases methylation ISO RGD:1604165 6480464 bisphenol A results in decreased methylation of CTU2 gene CTD PMID:31601247 Ctu2 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of CTU2 protein CTD PMID:32145629 Ctu2 Rat bisphenol A decreases methylation ISO RGD:1551092 6480464 bisphenol A results in decreased methylation of CTU2 promoter CTD PMID:27312807 Ctu2 Rat bisphenol F decreases expression ISO RGD:1551092 6480464 bisphenol F results in decreased expression of CTU2 mRNA CTD PMID:38685157 Ctu2 Rat caffeine decreases phosphorylation ISO RGD:1604165 6480464 Caffeine results in decreased phosphorylation of CTU2 protein CTD PMID:35688186 Ctu2 Rat calcitriol decreases expression ISO RGD:1604165 6480464 Calcitriol results in decreased expression of CTU2 mRNA CTD PMID:21592394 Ctu2 Rat calcitriol multiple interactions ISO RGD:1604165 6480464 [Testosterone co-treated with Calcitriol] results in decreased expression of CTU2 mRNA CTD PMID:21592394 Ctu2 Rat cobalt dichloride increases expression ISO RGD:1604165 6480464 cobaltous chloride results in increased expression of CTU2 mRNA CTD PMID:19376846 Ctu2 Rat cyclosporin A increases expression ISO RGD:1604165 6480464 Cyclosporine results in increased expression of CTU2 mRNA CTD PMID:20106945|PMID:25562108 Ctu2 Rat DDE increases expression ISO RGD:1604165 6480464 Dichlorodiphenyl Dichloroethylene results in increased expression of CTU2 mRNA CTD PMID:38568856 Ctu2 Rat doxorubicin decreases expression ISO RGD:1604165 6480464 Doxorubicin results in decreased expression of CTU2 mRNA CTD PMID:29803840 Ctu2 Rat folic acid increases expression ISO RGD:1551092 6480464 Folic Acid results in increased expression of CTU2 mRNA CTD PMID:25629700 Ctu2 Rat folic acid multiple interactions ISO RGD:1551092 6480464 Folic Acid inhibits the reaction [1,2-Dimethylhydrazine results in increased expression of CTU2 mRNA] CTD PMID:22206623 Ctu2 Rat FR900359 increases phosphorylation ISO RGD:1604165 6480464 FR900359 results in increased phosphorylation of CTU2 protein CTD PMID:37730182 Ctu2 Rat sodium arsenite decreases expression ISO RGD:1604165 6480464 sodium arsenite results in decreased expression of CTU2 mRNA CTD PMID:38568856 Ctu2 Rat sodium fluoride decreases expression ISO RGD:1551092 6480464 Sodium Fluoride results in decreased expression of CTU2 protein CTD PMID:28918527 Ctu2 Rat Soman increases expression EXP 6480464 Soman results in increased expression of CTU2 mRNA CTD PMID:19281266 Ctu2 Rat sunitinib increases expression ISO RGD:1604165 6480464 Sunitinib results in increased expression of CTU2 mRNA CTD PMID:31533062 Ctu2 Rat testosterone multiple interactions ISO RGD:1604165 6480464 [Testosterone co-treated with Calcitriol] results in decreased expression of CTU2 mRNA CTD PMID:21592394 Ctu2 Rat testosterone decreases expression ISO RGD:1604165 6480464 Testosterone results in decreased expression of CTU2 mRNA CTD PMID:21592394 Ctu2 Rat tetrachloroethene decreases expression ISO RGD:1551092 6480464 Tetrachloroethylene results in decreased expression of CTU2 mRNA CTD PMID:28973375 Ctu2 Rat tetrachloromethane increases expression EXP 6480464 Carbon Tetrachloride results in increased expression of CTU2 mRNA CTD PMID:31150632 Ctu2 Rat tetrachloromethane increases expression ISO RGD:1551092 6480464 Carbon Tetrachloride results in increased expression of CTU2 mRNA CTD PMID:31919559 Ctu2 Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of CTU2 mRNA CTD PMID:23411599 Ctu2 Rat thiram decreases expression ISO RGD:1604165 6480464 Thiram results in decreased expression of CTU2 mRNA CTD PMID:38568856 Ctu2 Rat valproic acid increases methylation ISO RGD:1604165 6480464 Valproic Acid results in increased methylation of CTU2 gene CTD PMID:29154799 Ctu2 Rat valproic acid affects expression ISO RGD:1551092 6480464 Valproic Acid affects the expression of CTU2 mRNA CTD PMID:17963808 Ctu2 Rat zoledronic acid decreases expression ISO RGD:1604165 6480464 zoledronic acid results in decreased expression of CTU2 mRNA CTD PMID:20977926
Ctu2 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 19 67,447,762 - 67,453,169 (+) NCBI GRCr8 mRatBN7.2 19 50,539,184 - 50,544,629 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 19 50,539,352 - 50,544,623 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 19 57,334,554 - 57,339,522 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 19 58,014,331 - 58,019,558 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 19 60,233,177 - 60,238,145 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 19 55,300,531 - 55,305,543 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 19 55,300,395 - 55,305,702 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 19 66,009,931 - 66,014,988 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 19 52,765,786 - 52,771,016 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 19 49,778,881 - 49,784,108 (+) NCBI Celera Cytogenetic Map 19 q12 NCBI
CTU2 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 16 88,706,503 - 88,715,396 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 16 88,706,483 - 88,715,396 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 16 88,772,911 - 88,781,804 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 16 87,300,392 - 87,309,295 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 16 73,276,731 - 73,278,805 (-) NCBI Celera Cytogenetic Map 16 q24.3 NCBI HuRef 16 74,467,287 - 74,477,681 (+) NCBI HuRef CHM1_1 16 90,184,233 - 90,193,064 (+) NCBI CHM1_1 T2T-CHM13v2.0 16 94,775,662 - 94,785,864 (+) NCBI T2T-CHM13v2.0
Ctu2 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 8 123,202,882 - 123,209,831 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 8 123,202,882 - 123,210,877 (+) Ensembl GRCm39 Ensembl GRCm38 8 122,476,068 - 122,483,092 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 8 122,476,143 - 122,484,138 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 8 125,000,043 - 125,006,992 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 8 125,362,280 - 125,367,837 (+) NCBI MGSCv36 mm8 MGSCv36 8 122,545,627 - 122,551,185 (+) NCBI MGSCv36 mm8 Celera 8 126,705,199 - 126,712,124 (+) NCBI Celera Cytogenetic Map 8 E1 NCBI cM Map 8 71.26 NCBI
Ctu2 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955541 2,610,021 - 2,618,197 (+) NCBI ChiLan1.0 ChiLan1.0
CTU2 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 18 98,479,814 - 98,488,599 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 16 104,391,891 - 104,400,757 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 16 69,419,811 - 69,428,500 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 16 89,080,476 - 89,088,363 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 16 89,079,132 - 89,088,231 (+) Ensembl panpan1.1 panPan2
CTU2 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 64,640,389 - 64,647,298 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 64,640,389 - 64,647,215 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 64,651,709 - 64,658,603 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 64,860,459 - 64,867,333 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 64,860,459 - 64,867,295 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 64,886,634 - 64,893,522 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 64,718,200 - 64,725,080 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 65,124,376 - 65,131,248 (-) NCBI UU_Cfam_GSD_1.0
Ctu2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
CTU2 (Sus scrofa - pig)
CTU2 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 5 74,091,156 - 74,100,941 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 5 74,091,258 - 74,100,573 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666047 1,579,212 - 1,589,006 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Ctu2 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 113 Count of miRNA genes: 94 Interacting mature miRNAs: 104 Transcripts: ENSRNOT00000033316 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
2313395 Anxrr26 Anxiety related response QTL 26 aggression-related behavior trait (VT:0015014) tameness/aggressiveness composite score (CMO:0002136) 19 49976481 53225766 Rat 1578764 Stresp19 Stress response QTL 19 3.6 0.001 blood renin amount (VT:0003349) plasma renin activity level (CMO:0000116) 19 15630201 57337602 Rat 61350 Bp32 Blood pressure QTL 32 0.012 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 19 20483575 57337602 Rat 5135224 Leukc1 Leukocyte quantity QTL 1 eosinophil quantity (VT:0002602) blood eosinophil count (CMO:0000033) 19 44340214 55283277 Rat 724546 Kidm3 Kidney mass QTL 3 3.1 kidney mass (VT:0002707) calculated kidney weight (CMO:0000160) 19 29322490 57337602 Rat 7411549 Bw130 Body weight QTL 130 5 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 19 15455860 57337602 Rat 1358200 Insglur2 Insulin/glucose ratio QTL 2 4.1 blood glucose amount (VT:0000188) serum glucose level (CMO:0000543) 19 33838214 55283146 Rat 724566 Uae12 Urinary albumin excretion QTL 12 5 urine albumin amount (VT:0002871) urine albumin level (CMO:0000130) 19 2187927 56457239 Rat 1331737 Uae29 Urinary albumin excretion QTL 29 5.5 urine albumin amount (VT:0002871) urine albumin level (CMO:0000130) 19 4096155 55283277 Rat 2298478 Eau8 Experimental allergic uveoretinitis QTL 8 0.0163 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 19 17154433 57337602 Rat
RH131577
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 19 67,452,772 - 67,453,103 (+) Marker Load Pipeline mRatBN7.2 19 50,544,232 - 50,544,563 (+) MAPPER mRatBN7.2 Rnor_6.0 19 55,305,147 - 55,305,477 NCBI Rnor6.0 Rnor_5.0 19 66,014,592 - 66,014,922 UniSTS Rnor5.0 RGSC_v3.4 19 52,770,620 - 52,770,950 UniSTS RGSC3.4 Celera 19 49,783,712 - 49,784,042 UniSTS RH 3.4 Map 19 701.3 UniSTS Cytogenetic Map 19 q12 UniSTS
RH141716
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 19 50,544,757 - 50,544,940 (+) MAPPER mRatBN7.2 Rnor_6.0 19 55,305,672 - 55,305,854 NCBI Rnor6.0 Rnor_5.0 19 66,015,117 - 66,015,299 UniSTS Rnor5.0 RGSC_v3.4 19 52,771,145 - 52,771,327 UniSTS RGSC3.4 Celera 19 49,784,237 - 49,784,419 UniSTS RH 3.4 Map 19 698.5 UniSTS Cytogenetic Map 19 q12 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000092169 ⟹ ENSRNOP00000069225
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 19 50,539,352 - 50,544,623 (+) Ensembl Rnor_6.0 Ensembl 19 55,300,395 - 55,305,702 (+) Ensembl
RefSeq Acc Id:
NM_001037094 ⟹ NP_001032171
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 19 67,447,942 - 67,453,169 (+) NCBI mRatBN7.2 19 50,539,402 - 50,544,629 (+) NCBI Rnor_6.0 19 55,300,531 - 55,305,543 (+) NCBI Rnor_5.0 19 66,009,931 - 66,014,988 (+) NCBI RGSC_v3.4 19 52,765,786 - 52,771,016 (+) RGD Celera 19 49,778,881 - 49,784,108 (+) RGD
Sequence:
CCCAGCCCCTCCATGTGTCAGGCCGGTGAGGATTACGCGGGACCGGCGCAGCGGGAGCCTCCGCCCGTGCCGCGGCCGAGCCGGGAGCAGAAATGTGTGAAGTGCGCAGAAGGCCTACCGGTGGTGGT GATACGAGCGGGAGATGCCTTCTGCAGGGATTGTTTCAAGGCATTCTATGTCCACAAGTTCAGAGCCATGCTTGGGAAGAACCGAGTCATCTTTCCCGGCGAGAAGGTGCTCTTGTCGTGGTCTGGGG GTCCTTCGTCTAGCTCCATGGTCTGGCAAGTCCTTGAGGGCCTGAGTCAGGATTCTGCAAAACGGCTTCGCTTTGTGCCAGGAGTTATCTATGTTGATGAGGGGGCAGCCTGTGGCCAGAGCTTAGAG GACAGAGTGAAGACATTGGCTGAGGTGAAGCGGATCTTAGGGAACACTGGTTTCCCATTTCATGTGGTTGCCTTGGAAGAGGTGTTCAGCCTGCCGCCATCAGTGCTGCGCCGTGCTTCCCAGGAGCC AGCAGGGACAGAGGAGGCCTACAAGGCAGCTGTGGACAGCTTCCTGCAGCAGCAACATGTGCTAGGGACGGAGGCCTGCGCCAGCCCGGCTCAGGGACAGGGTCAGCTGCGTCCATCCCACAGCCAGG AACCCTCAGGCACGGTTGGGCACCCCAAAGATGCTCAGACTGAGGCCTTGTCTAGGTTGTTCAAGTCCATAAAGACACTCACAGCCAAAGAGGAGCTTCTGCAGACCCTAAGGACCCATCTGACTGTG CACGTGGCCCGAAGCCATGGCTACCGCAAGGTGATGACAGGGGAGAGCTGCACCCGTTTGGCCATCAAGCTTATGACCAACCTGGCCCTGGGGAGAGGCGCCTTCCTCGCTTGGGACACGGGCTTCTC AGATGAGCGGCATGGGGATGTGGTATTGGTGAGGCCCATGCGGGACCACACGCTGAAGGAAGTGGCCTTCTACAACCGCCTGTTTGGTGTCCCCTCTGTCTTCACACCAGCCATTGATACCAAGGCTC CAGAAAAGGCTAGTATCCACCGGCTGATGGAGGCCTTTATCTTGAAGCTGCAGACTCTCTTTCCCTCTACGGTCAGCACCGTGTACAGGACAAGTGAGAAGTTGGTCAAAGCTCCCCGGGAGGGCTGT GCCACTGGCCCCTCAGGCCCCAACTGCCTCCTCTGCATGTGTGCCTTAGACGTTGACAATGCTGACAGTGCCACGGCCTTTGGGGCTCAGTCCTCCTCACATCTCTCCCAGATGCTGACTGCTGAGGC TGGGACGCCTACCCGGCCCTGCTGTGGTGCAGGGGAGGGTCAGACCCAGAGCTGCCACAGGGCAGTCGGCAGGAGGGAGGATGCATGGGCCTGCATCATAGAGCAGTTATGTTACAGCTGCCGGGTGA ACATGAAGGACCTGCCCTCCCTGGACCCATTGCCACCCTACGTCCTGACTGAGGCTCAACTCCGCAGCCAGAGGGGCTCCGTCTCTGAGGAAATCCAGGAATATCTGATTGAGGAGGAGGAAGAGGAA GACAGAGCTGAGCCATGTGAAGCCATGAAGCAAGAAGCTGAGGACAAAGGGATTGGGCTATGACCGTCCATTTGTATAAATAAAAATGTTTTACTTAGAAAAAAAAAAAAAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
XR_005496643
Type:
NON-CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 19 67,447,762 - 67,452,810 (+) NCBI mRatBN7.2 19 50,539,184 - 50,544,621 (+) NCBI
RefSeq Acc Id:
NP_001032171 ⟸ NM_001037094
- UniProtKB:
Q6AXQ6 (UniProtKB/Swiss-Prot), Q5FVN4 (UniProtKB/Swiss-Prot), F1LQR2 (UniProtKB/Swiss-Prot), Q3B7U4 (UniProtKB/Swiss-Prot), A0A0G2JUT8 (UniProtKB/TrEMBL)
- Sequence:
MCQAGEDYAGPAQREPPPVPRPSREQKCVKCAEGLPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIYVDEGAACGQSLEDRVK TLAEVKRILGNTGFPFHVVALEEVFSLPPSVLRRASQEPAGTEEAYKAAVDSFLQQQHVLGTEACASPAQGQGQLRPSHSQEPSGTVGHPKDAQTEALSRLFKSIKTLTAKEELLQTLRTHLTVHVAR SHGYRKVMTGESCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVAFYNRLFGVPSVFTPAIDTKAPEKASIHRLMEAFILKLQTLFPSTVSTVYRTSEKLVKAPREGCATGP SGPNCLLCMCALDVDNADSATAFGAQSSSHLSQMLTAEAGTPTRPCCGAGEGQTQSCHRAVGRREDAWACIIEQLCYSCRVNMKDLPSLDPLPPYVLTEAQLRSQRGSVSEEIQEYLIEEEEEEDRAE PCEAMKQEAEDKGIGL
hide sequence
Ensembl Acc Id:
ENSRNOP00000069225 ⟸ ENSRNOT00000092169
RGD ID: 13701208
Promoter ID: EPDNEW_R11730
Type: single initiation site
Name: Ctu2_2
Description: cytosolic thiouridylase subunit 2
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Alternative Promoters: null; see alsoEPDNEW_R11732
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 19 55,300,357 - 55,300,417 EPDNEW
RGD ID: 13701210
Promoter ID: EPDNEW_R11732
Type: single initiation site
Name: Ctu2_1
Description: cytosolic thiouridylase subunit 2
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Alternative Promoters: null; see alsoEPDNEW_R11730
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 19 55,300,522 - 55,300,582 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-03-29
Ctu2
cytosolic thiouridylase subunit 2
Ctu2
cytosolic thiouridylase subunit 2 homolog (S. pombe)
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2009-10-22
Ctu2
cytosolic thiouridylase subunit 2 homolog (S. pombe)
LOC292069
similar to RIKEN cDNA 2310061F22
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2006-02-09
LOC292069
similar to RIKEN cDNA 2310061F22
Symbol and Name status set to provisional
70820
PROVISIONAL