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Gene: Pgbd5 (piggyBac transposable element derived 5) Rattus norvegicus
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Symbol: Pgbd5
Name: piggyBac transposable element derived 5
Description: Predicted to have transposase activity. Predicted to be involved in non-replicative transposition, DNA-mediated. Predicted to localize to the nucleus. Orthologous to human PGBD5 (piggyBac transposable element derived 5); INTERACTS WITH 1,2-dimethylhydrazine; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC292098; piggyBac transposable element-derived protein 5
Orthologs:
Homo sapiens (human) : PGBD5 (piggyBac transposable element derived 5)  HGNC  Alliance
Mus musculus (house mouse) : Pgbd5 (piggyBac transposable element derived 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pgbd5 (piggyBac transposable element derived 5)
Pan paniscus (bonobo/pygmy chimpanzee) : PGBD5 (piggyBac transposable element derived 5)
Canis lupus familiaris (dog) : PGBD5 (piggyBac transposable element derived 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pgbd5 (piggyBac transposable element derived 5)
Sus scrofa (pig) : PGBD5 (piggyBac transposable element derived 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01957,126,110 - 57,192,182 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1957,127,054 - 57,192,095 (-)Ensembl
Rnor_5.01967,834,478 - 67,900,336 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41954,542,070 - 54,608,511 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11954,546,634 - 54,580,371 (-)NCBI
Celera1951,707,799 - 51,772,592 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pgbd5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310825
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.