Fhod1 (formin homology 2 domain containing 1)

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Gene: Fhod1 (formin homology 2 domain containing 1) Rattus norvegicus

Analyze

Symbol:

Fhod1

Name:

formin homology 2 domain containing 1

RGD ID:

1589776

Description:

Predicted to have identical protein binding activity; protein domain specific binding activity; and protein self-association. Predicted to be involved in several processes, including establishment of centrosome localization; nuclear migration; and positive regulation of stress fiber assembly. Predicted to colocalize with stress fiber. Orthologous to human FHOD1 (formin homology 2 domain containing 1); INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; acetamide; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

FH1/FH2 domain-containing protein 1; LOC291964; similar to FH1/FH2 domain-containing protein (Formin homolog overexpressed in spleen) (FHOS) (Formin homology 2 domain-containing protein 1)

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	19	33,206,492 - 33,225,448 (-)	NCBI
Rnor_6.0 Ensembl	19	37,284,923 - 37,303,788 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	19	37,284,923 - 37,303,855 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	19	48,150,419 - 48,169,200 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	35,144,278 - 35,163,130 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	19	32,635,094 - 32,653,786 (-)	NCBI		Celera
Cytogenetic Map	19	q11-q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-methylcholine (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

acetamide (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

carbon nanotube (ISO)

cobalt dichloride (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (ISO)

dioxygen (ISO)

entinostat (ISO)

folic acid (ISO)

indometacin (ISO)

oxaliplatin (EXP)

perfluorooctanoic acid (ISO)

sunitinib (ISO)

topotecan (EXP)

tributylstannane (EXP)

tungsten (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament network formation (IBA)

cortical actin cytoskeleton organization (IBA)

establishment of centrosome localization (ISO)

nuclear migration (ISO)

positive regulation of stress fiber assembly (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of stress fiber assembly (ISO)

Cellular Component

cytoplasm (IBA)

cytoskeleton (IBA)

cytosol (IEA,ISO)

intercalated disc (ISO)

nucleoplasm (IEA,ISO)

nucleus (ISO)

stress fiber (ISO)

Molecular Function

actin filament binding (IBA)

identical protein binding (ISO)

protein binding (ISO)

protein domain specific binding (ISO)

protein self-association (ISO)

References

References - curated


1.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7988697	PMID:15095401	PMID:15642356	PMID:16361249	PMID:18239683	PMID:18786395	PMID:19946888	PMID:24880667	PMID:25125170	PMID:25555464

Genomics

Comparative Map Data

Fhod1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	19	33,206,492 - 33,225,448 (-)	NCBI
Rnor_6.0 Ensembl	19	37,284,923 - 37,303,788 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	19	37,284,923 - 37,303,855 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	19	48,150,419 - 48,169,200 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	35,144,278 - 35,163,130 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	19	32,635,094 - 32,653,786 (-)	NCBI		Celera
Cytogenetic Map	19	q11-q12	NCBI

FHOD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	16	67,229,387 - 67,247,481 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	16	67,229,389 - 67,247,481 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	16	67,263,292 - 67,281,384 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	65,820,793 - 65,838,926 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	16	65,820,794 - 65,838,832	NCBI
Celera	16	51,771,526 - 51,789,659 (-)	NCBI
Cytogenetic Map	16	q22.1	NCBI
HuRef	16	53,136,470 - 53,154,499 (-)	NCBI		HuRef
CHM1_1	16	68,670,620 - 68,688,753 (-)	NCBI		CHM1_1

Fhod1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	106,055,792 - 106,074,650 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	8	106,055,795 - 106,074,585 (-)	Ensembl
GRCm38	8	105,329,160 - 105,348,062 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	105,329,163 - 105,347,953 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	107,853,060 - 107,871,870 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	108,218,294 - 108,237,060 (-)	NCBI			mm8
Celera	8	109,552,309 - 109,571,118 (-)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI

Fhod1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	9,380,216 - 9,396,202 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	9,380,202 - 9,396,400 (+)	NCBI	ChiLan1.0	ChiLan1.0

FHOD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	16	66,963,790 - 66,981,890 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	66,963,790 - 66,981,896 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	16	47,574,949 - 47,593,022 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

FHOD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	5	82,129,965 - 82,145,604 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	5	82,129,846 - 82,145,605 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Fhod1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936475	17,694,265 - 17,709,984 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FHOD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	27,867,502 - 27,883,072 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	27,867,499 - 27,883,077 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	25,107,426 - 25,111,432 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FHOD1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	60,207,972 - 60,227,032 (+)	NCBI
ChlSab1.1 Ensembl	5	60,208,109 - 60,229,272 (+)	Ensembl

Fhod1
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624746	19,072,775 - 19,090,561 (+)	NCBI

QTLs in Region (Rnor_6.0)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61447	Tcas1	Tongue tumor susceptibility QTL 1	6.08		tongue integrity trait (VT:0010553)	squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)	19	1957707	46957707	Rat
724518	Uae19	Urinary albumin excretion QTL 19	5.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	8072545	47318201	Rat
724546	Kidm3	Kidney mass QTL 3	3.1		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	19	32994392	62275575	Rat
724565	Tcas5	Tongue tumor susceptibility QTL 5	10.04		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	19	5007571	43907843	Rat
724566	Uae12	Urinary albumin excretion QTL 12	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	2432963	62275575	Rat
1331737	Uae29	Urinary albumin excretion QTL 29	5.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	6506761	60220581	Rat
1331788	Rf45	Renal function QTL 45	2.818		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	19	17028003	52538299	Rat
2298478	Eau8	Experimental allergic uveoretinitis QTL 8		0.0163	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	19	21407787	62275575	Rat
1578764	Stresp19	Stress response QTL 19	3.6	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	19	18993982	62275575	Rat
1354600	Salc2	Saline consumption QTL 2	9.91	0.001	drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	19	31194301	41686140	Rat
1354607	Gmadr1	Adrenal mass QTL 1	5.83		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	19	31194301	41686140	Rat
1354633	Bw28	Body weight QTL 28	6.04		body mass (VT:0001259)	body weight (CMO:0000012)	19	31194301	41686140	Rat
1558656	Prcs1	Prostate cancer susceptibility QTL 1	5		prostate integrity trait (VT:0010571)	percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)	19	15939528	38798459	Rat
1549835	Tcas7	Tongue tumor susceptibility QTL 7		0.001	tongue integrity trait (VT:0010553)	squamous cell carcinoma of the head and neck tumor number (CMO:0001876)	19	24455726	43907843	Rat
2317848	Alcrsp21	Alcohol response QTL 21	1.899999976158142	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	19	1044648	46044648	Rat
61350	Bp32	Blood pressure QTL 32		0.012	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	19	24818257	62275575	Rat
61423	Cia14	Collagen induced arthritis QTL 14	3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	19	11303927	47879277	Rat
9589102	Slep13	Serum leptin concentration QTL 13	4.63	0.001	blood leptin amount (VT:0005667)	plasma leptin level (CMO:0000781)	19	3701835	48701835	Rat
7247442	Uae39	Urinary albumin excretion QTL 39			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	2432963	47217667	Rat
9590298	Uminl5	Urine mineral level QTL 5	3.59	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	19	1	38221845	Rat
8694186	Bw152	Body weight QTL 152	3.34	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	3701835	48701835	Rat
8552935	Pigfal10	Plasma insulin-like growth factor 1 level QTL 10	5.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	19	1	38221845	Rat
7411549	Bw130	Body weight QTL 130	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	19177495	62275575	Rat
9590250	Scort11	Serum corticosterone level QTL 11	23.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	19	1	38221845	Rat
9590090	Insglur8	Insulin/glucose ratio QTL 8	10.81	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	19	1	38221845	Rat

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	51
Count of miRNA genes:	44
Interacting mature miRNAs:	50
Transcripts:	ENSRNOT00000021935
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	21	21	6	19	6	4	7	14	30	33	11	4
Low		22	36	35		35	4	4	60	5	8		4
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC120484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000084734 ⟹ ENSRNOP00000070898

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	19	37,284,923 - 37,303,788 (-)	Ensembl

RefSeq Acc Id:

NM_001191600 ⟹ NP_001178529

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	19	33,206,492 - 33,225,356 (-)	NCBI
Rnor_6.0	19	37,284,923 - 37,303,788 (-)	NCBI
Rnor_5.0	19	48,150,419 - 48,169,200 (-)	NCBI
Celera	19	32,635,094 - 32,653,786 (-)	NCBI

Sequence:

show sequence

GGCAGCCGGAGGCAGAGCCATGGCGGGCGAGGAAGAGCGCGGGGATGGGGACCCAGTATCAGTG
GTGACTGTGAGAGTGCAGTACCTGGAAGACACCGACCCTTTCGCTTGTGCCAACTTCCCGGAAC
CACGCCGGGCCCCCACCTGCAGCTTGGACGGGGCTCTGCCCCTGAGTGCGCAGATCCCTGCTCT
GCACCGACTCCTGGGAGCGCCTCTCAAGCTGGAGGACTGTGCGTTGCAAGTGTCGCCCTCTGGA
TACTACCTGGACCCGGAGCTGTCCCTAGAAGAACAGCGGGAGATGCTGGAGGGCTTCTATGAAG
AGATCAGCAAAGGGCGGAAGCCCACATTGATCCTGCGGACCCAGCTCTCTGTGAGGGTCAATGC
TATCTTGGAAAAGCTGTATGGCTCCAGTGGCCCCGAGCTCCGCCGATCCCTCTTTTCATTAAAG
CAGATATTCCAGGAAGACAAGGACCTGGTGCCTGAATTTGTACACTCAGAGGGGTTGAGTTGCC
TGATCCGCGTGGGTGCTGCTGCTGACCACAACTATCAGAGCTACATCCTTCGAGCCCTGGGCCA
GCTGATGCTTTTTGTGGATGGGATGCTAGGGGTGGTGGCGCACAGTGAGACCGTGCAATGGCTG
TATACACTGTGTGCAAGCCTGTCCCGCTTGGTGGTAAAGACAGCCCTGAAGCTGCTGCTGGTGT
TTGTGGAGTATTCTGAGAACAATGCACCGCTCTTCATCCAGGCAGTCAACGCTGTAGCCAGCAA
CACCGGTACTCTTCCCTGGGCCAACTTGGTGTCCATCCTGGAGGAGAAGAATGGAGTTGATCCA
GAGCTGTTGGTGTACACGGTCACTCTCATTAACAAGACACTGGCGGCGCTCCCAGACCAGGACT
CCTTCTATGATGTGACAGATGCTTTTGAGCAGCAGGGCATGGAAGCGCTGGTCCAACGTCTCTT
GGGCACTGCTGGCACTGATGTTGACCTGCGAACACAGCTAACGCTCTATGAGAGCGCCCTTCGG
TTAGAGGATGGAGATATGGAAGAGGCTGCAGCTGCTGCAGCTGCAGGTGGCCGACGAGAGCGAC
GGAAGCCATCCTCAGAGGAGGGCAAAAGGAGCCGAAGATCACTAGAAGGTGGAGGCTGTCCTGT
GCGTACCCCAGAACCTGGCCCAACAGGCTCTGCCTCTCCAGTAGGCTCCGCCTCCTTCACTGAC
TCCACCTCGCCTACAAGTTCGGCCTTCAGCCCTACTGGCCCAGCCTCTGGTCTTCATACCTCAG
TGAACCTCTTTCCTACCATTTCTGTGGGGCCCTCAGTGGACACTTCCTGTGAGAGAAGTGTCTA
CAAAGCCCGGTTTCTGGAGAATGTGGCAGCAGCAGAGACAGAGAAGCAGGCTGCTCTGGCCCAA
GGCCGAGCAGAGACGCTGGCAGGGGCAACAGTGGATGAGACAGATGAGTCATCAGGCACCAGGG
AACTGTGGGACTCTTCAGAGCCAGCCTCTGCACCCAGACCACCTCAGAGCCCTGTTTCCCCAAT
CGTGCTGCGGACCCAGAGAAGTCTTGAGCCTGAGCCCAAGGAGCCAGTGTCACCACGAAGCCCT
AAGACTGAGCCTGTCCAGGAGCTTCCTACTCACGTACCCAAGCTCTGCATTGGAGACTTGGACT
TCTCAGATCTAGGGGAGGATGAAGACCAGGACACATTGAATGTGGAATCTGTGGAGGCTGGAAA
AGCATCCCTGGTCCTGTCACTTCCACCACCACCTCCACCCCCACCTCCCCCACCCATCATGGGC
TCCTGCCTACCACCTCCACCCCTGGCTGCTCCTTTTCCCCACTCAGCCCTTGACGGCCCAAGGC
ACCCCACCAAAAGGAAGACTGTAAAACTTTTCTGGCGGGAACTAAAGCCGACTGGGAGCCCTGG
GTGTTCTAGAAGCCGCTTTGGGCCTTGTCCTACCTTGTGGGCCTCTCTGGAACCTGTCTCGGTG
GACACAGCCCGGCTGGAACACCTATTTGAGTCCCGAGCCAAGGATGTGCTACCCACCAAGAAAG
CTGGTGAGGGCCGCCGGACAATGACCATAGTTCTGGACCCCAAGCGCAGCAATGCCATCAACAT
TGGCCTAACCACTCTGCCACCTGTGCATGTCATCAAGGCTGCTCTGCTCAACTTTGATGAATTT
GCTGTCAGCAAGGATGGTATTGAGAAACTGCTGACCATGATGCCCACGGAGGAAGAGCGACAGA
AGATTGAGGAAGCCCAGCTGGCCAACCCTGATGTGCCCCTCGGCCCAGCTGAGAATTTCCTGAT
GACTCTTGCTTCCATTGGAGGCCTGGCCGCGCGCCTGCAACTCTGGGCTTTCAAGCTGGACTAT
GAAAGCATGGAGCGGGAAATTGCAGAGCCACTGTTTGATCTGAAAGTGGGCATGGAACAGTTGG
TGCACAATGCCACCTTCCGTTGCATTCTGGCTACCCTTTTGGCTGTGGGCAACTTCCTCAATGG
CTCCCAGAGCAGTGGCTTTGAGCTGAGCTACCTGGAGAAGGTGTCAGAAGTAAAGGACACAGTG
CGCCGGCAGTCACTGCTGTATCATCTCTGTTCCCTGGTGCTCCAGACCCGACCTGATTCCTCTG
ACCTCTACTCAGAAATTCCTGCCCTCACCCGCTGTGCCAAGGTGGACTTTGAGCAGCTGACTGA
GAACCTAGGGCAGCTGGAGTGCCGGAGCCAGGCTGCTGAGGACAGCCTCCGGAGCTTGGCAAAG
CATGAGCTATCCCCAGCTCTGCGTGCCCGCCTTACCCACTTCCTGGCCCAATGTACCCGCCGAG
TAGCCATGCTAAGAGTAGTACACCGTCGAGTCTGCAACAGGTTCCACGCCTTCCTTCTCTACTT
GGGCTACACCGCACAGGCAGCAAGGGAAGTACGCATCATGCAGTTCTGTCACACGCTCAGAGAG
TTTGCACTTGAGTATCGGACTTGTCGGGAGCGGGTACTGCAGCAGCAGCAGAAACGGGCTACAT
ACCGCGAACGCAACAAGACCCGGGGTCGCATGATTACTGAGACAGAGAAGTTCTCGGGTGTGGC
TGGGGAGGTCCCCAGTAACCTGTCTGTCCCAGTGGCTGTGGGCAGCGGGCCAGGTCGGGGTGAT
GCTGACAATCATGCCAGTATGAAGAGTTTGCTTACCAGCAGGCCAGAAGACGCCACACACAGCC
GACGTAGCAGAGGTATGGTCCAGAGTAGTTCCCCCGTCACACACACAACAGTAGGGCCCTTCAC
TGCATCCCCTGAGGAGACTGCAGCCTCTGGTTTACCTAGTGACACATCAGATGAGATAATGGAC
CTGCTGGTGCAGTCAGTCACCAAGAGCAGTCCTAGAGCCTTGGCTGCTCGGGAGAGGAAGCGCT
CTCGTGGCAACCGGAAGTCCTTGAGGCGGACATTGAAGAGTGGACTTGGAGATGACCTGGTGCA
GGCACTGGGACTAAGCAAAGCTCCTGGCCTAGAGGTGTAAGGGTGCTGCCACACCTGGAGCTGA
GCAGAGAGGGCGCAGAGCACAAACCTGGTTTCAGAAGCTTGCACCCAGAAACCAGCATTGTGAA
CAGTATTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACATA
CATGTATTTCGCATATGTGAGTTCCCTATTCGGAACAAAATAAAGTTTACCTAGCTAATCCAAA
A

hide sequence

RefSeq Acc Id:

XM_008772483 ⟹ XP_008770705

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	19	33,206,492 - 33,225,445 (-)	NCBI
Rnor_6.0	19	37,284,923 - 37,303,855 (-)	NCBI

Sequence:

show sequence

GCCCTAACAGCAAAGTTAGTCCAGTTGAAGTTGCAGCATTGCAGGGACACAGAGGCGTCCGTCC
AGTGGCAGCCGGAGGCAGAGCCATGGCGGGCGAGGAAGAGCGCGGGGATGGGGACCCAGTATCA
GTGGTGACTGTGAGAGTGCAGTACCTGGAAGACACCGACCCTTTCGCTTGTGCCAACTTCCCGG
AACCACGCCGGGCCCCCACCTGCAGCTTGGACGGGGCTCTGCCCCTGAGTGCGCAGATCCCTGC
TCTGCACCGACTCCTGGGAGCGCCTCTCAAGCTGGAGGACTGTGCGTTGCAAGTGTCGCCCTCT
GGATACTACCTGGACCCGGAGCTGTCCCTAGAAGAACAGCGGGAGATGCTGGAGGGCTTCTATG
AAGAGATCAGCAAAGGGCGGAAGCCCACATTGATCCTGCGGACCCAGCTCTCTGTGAGGGTCAA
TGCTATCTTGGAAAAGCTGTATGGCTCCAGTGGCCCCGAGCTCCGCCGATCCCTCTTTTCATTA
AAGCAGATATTCCAGGAAGACAAGGACCTGGTGCCTGAATTTGTACACTCAGAGGGGTTGAGTT
GCCTGATCCGCGTGGGTGCTGCTGCTGACCACAACTATCAGAGCTACATCCTTCGAGCCCTGGG
CCAGCTGATGCTTTTTGTGGATGGGATGCTAGGGGTGGTGGCGCACAGTGAGACCGTGCAATGG
CTGTATACACTGTGTGCAAGCCTGTCCCGCTTGGTGGTAAAGACAGCCCTGAAGCTGCTGCTGG
TGTTTGTGGAGTATTCTGAGAACAATGCACCGCTCTTCATCCAGGCAGTCAACGCTGTAGCCAG
CAACACCGGTACTCTTCCCTGGGCCAACTTGGTGTCCATCCTGGAGGAGAAGAATGGAGTTGAT
CCAGAGCTGTTGGTGTACACGGTCACTCTCATTAACAAGACACTGGCGGCGCTCCCAGACCAGG
ACTCCTTCTATGATGTGACAGATGCTTTTGAGCAGCAGGGCATGGAAGCGCTGGTCCAACGTCT
CTTGGGCACTGCTGGCACTGATGTTGACCTGCGAACACAGCTAACGCTCTATGAGAGCGCCCTT
CGGTTAGAGGATGGAGATATGGAAGAGGCTGCAGCTGCTGCAGCTGCAGGTGGCCGACGAGAGC
GACGGAAGCCATCCTCAGAGGAGGGCAAAAGGAGCCGAAGATCACTAGAAGGTGGAGGCTGTCC
TGTGCGTACCCCAGAACCTGGCCCAACAGGCTCTGCCTCTCCAGTAGGCTCCGCCTCCTTCACT
GACTCCACCTCGCCTACAAGTTCGGCCTTCAGCCCTACTGGCCCAGCCTCTGGTCTTCATACCT
CAGTGAACCTCTTTCCTACCATTTCTGTGGGGCCCTCAGTGGACACTTCCTGTGAGAGAAGTGT
CTACAAACTTCACCAAACTGCTCCCATTTGCTCCCCTGAGAGTCTACCTGTCCCCCAGTCCCTT
ACTGGGCAGGCCAGGCTAGAAGCCCGGTTTCTGGAGAATGTGGCAGCAGCAGAGACAGAGAAGC
AGGCTGCTCTGGCCCAAGGCCGAGCAGAGACGCTGGCAGGGGCAACAGTGGATGAGACAGATGA
GTCATCAGGCACCAGGGAACTGTGGGACTCTTCAGAGCCAGCCTCTGCACCCAGACCACCTCAG
AGCCCTGTTTCCCCAATCGTGCTGCGGACCCAGAGAAGTCTTGAGCCTGAGCCCAAGGAGCCAG
TGTCACCACGAAGCCCTAAGACTGAGCCTGTCCAGGAGCTTCCTACTCACGTACCCAAGCTCTG
CATTGGAGACTTGGACTTCTCAGATCTAGGGGAGGATGAAGACCAGGACACATTGAATGTGGAA
TCTGTGGAGGCTGGAAAAGCATCCCTGGTCCTGTCACTTCCACCGTCTTCATTCTCTGGGGGTC
CCCCTCCTCCCCCCCCACCTCCCCCACCCATCATAGTCTCCTGTCCACCACCTCCACCCCCACC
TCCCCCACCCATCATGGGCTCCTGCCTACCACCTCCACCCCTGGCTGCTCCTTTTCCCCACTCA
GCCCTTGACGGCCCAAGGCACCCCACCAAAAGGAAGACTGTAAAACTTTTCTGGCGGGAACTAA
AGCCGACTGGGAGCCCTGGGTGTTCTAGAAGCCGCTTTGGGCCTTGTCCTACCTTGTGGGCCTC
TCTGGAACCTGTCTCGGTGGACACAGCCCGGCTGGAACACCTATTTGAGTCCCGAGCCAAGGAT
GTGCTACCCACCAAGAAAGCTGGTGAGGGCCGCCGGACAATGACCATAGTTCTGGACCCCAAGC
GCAGCAATGCCATCAACATTGGCCTAACCACTCTGCCACCTGTGCATGTCATCAAGGCTGCTCT
GCTCAACTTTGATGAATTTGCTGTCAGCAAGGATGGTATTGAGAAACTGCTGACCATGATGCCC
ACGGAGGAAGAGCGACAGAAGATTGAGGAAGCCCAGCTGGCCAACCCTGATGTGCCCCTCGGCC
CAGCTGAGAATTTCCTGATGACTCTTGCTTCCATTGGAGGCCTGGCCGCGCGCCTGCAACTCTG
GGCTTTCAAGCTGGACTATGAAAGCATGGAGCGGGAAATTGCAGAGCCACTGTTTGATCTGAAA
GTGGGCATGGAACAGTTGGTGCACAATGCCACCTTCCGTTGCATTCTGGCTACCCTTTTGGCTG
TGGGCAACTTCCTCAATGGCTCCCAGAGCAGTGGCTTTGAGCTGAGCTACCTGGAGAAGGTGTC
AGAAGTAAAGGACACAGTGCGCCGGCAGTCACTGCTGTATCATCTCTGTTCCCTGGTGCTCCAG
ACCCGACCTGATTCCTCTGACCTCTACTCAGAAATTCCTGCCCTCACCCGCTGTGCCAAGGTGG
ACTTTGAGCAGCTGACTGAGAACCTAGGGCAGCTGGAGTGCCGGAGCCAGGCTGCTGAGGACAG
CCTCCGGAGCTTGGCAAAGCATGAGCTATCCCCAGCTCTGCGTGCCCGCCTTACCCACTTCCTG
GCCCAATGTACCCGCCGAGTAGCCATGCTAAGAGTAGTACACCGTCGAGTCTGCAACAGGTTCC
ACGCCTTCCTTCTCTACTTGGGCTACACCGCACAGGCAGCAAGGGAAGTACGCATCATGCAGTT
CTGTCACACGCTCAGAGAGTTTGCACTTGAGTATCGGACTTGTCGGGAGCGGGTACTGCAGCAG
CAGCAGAAACGGGCTACATACCGCGAACGCAACAAGACCCGGGGTCGCATGATTACTGAGACAG
AGAAGTTCTCGGGTGTGGCTGGGGAGGTCCCCAGTAACCTGTCTGTCCCAGTGGCTGTGGGCAG
CGGGCCAGGTCGGGGTGATGCTGACAATCATGCCAGTATGAAGAGTTTGCTTACCAGCAGGCCA
GAAGACGCCACACACAGCCGACGTAGCAGAGGTATGGTCCAGAGTAGTTCCCCCGTCACACACA
CAACAGTAGGGCCCTTCACTGCATCCCCTGAGGAGACTGCAGCCTCTGGTTTACCTAGTGACAC
ATCAGATGAGATAATGGACCTGCTGGTGCAGTCAGTCACCAAGAGCAGTCCTAGAGCCTTGGCT
GCTCGGGAGAGGAAGCGCTCTCGTGGCAACCGGAAGTCCTTGAGGCGGACATTGAAGAGTGGAC
TTGGAGATGACCTGGTGCAGGCACTGGGACTAAGCAAAGCTCCTGGCCTAGAGGTGTAAGGGTG
CTGCCACACCTGGAGCTGAGCAGAGAGGGCGCAGAGCACAAACCTGGTTTCAGAAGCTTGCACC
CAGAAACCAGCATTGTGAACAGTATTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTACACATACATGTATTTCGCATATGTGAGTTCCCTATTCGGAACAAAATAAAG
TTTACCTAGCTAATCCAAAA

hide sequence

RefSeq Acc Id:

XM_008772484 ⟹ XP_008770706

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	19	33,206,492 - 33,225,444 (-)	NCBI
Rnor_6.0	19	37,284,923 - 37,303,855 (-)	NCBI

Sequence:

show sequence

GCCCTAACAGCAAAGTTAGTCCAGTTGAAGTTGCAGCATTGCAGGGACACAGAGGCGTCCGTCC
AGTGGCAGCCGGAGGCAGAGCCATGGCGGGCGAGGAAGAGCGCGGGGATGGGGACCCAGTATCA
GTGGTGACTGTGAGAGTGCAGTACCTGGAAGACACCGACCCTTTCGCTTGTGCCAACTTCCCGG
AACCACGCCGGGCCCCCACCTGCAGCTTGGACGGGGCTCTGCCCCTGAGTGCGCAGATCCCTGC
TCTGCACCGACTCCTGGGAGCGCCTCTCAAGCTGGAGGACTGTGCGTTGCAAGTGTCGCCCTCT
GGATACTACCTGGACCCGGAGCTGTCCCTAGAAGAACAGCGGGAGATGCTGGAGGGCTTCTATG
AAGAGATCAGCAAAGGGCGGAAGCCCACATTGATCCTGCGGACCCAGCTCTCTGTGAGGGTCAA
TGCTATCTTGGAAAAGCTGTATGGCTCCAGTGGCCCCGAGCTCCGCCGATCCCTCTTTTCATTA
AAGCAGATATTCCAGGAAGACAAGGACCTGGTGCCTGAATTTGTACACTCAGAGGGGTTGAGTT
GCCTGATCCGCGTGGGTGCTGCTGCTGACCACAACTATCAGAGCTACATCCTTCGAGCCCTGGG
CCAGCTGATGCTTTTTGTGGATGGGATGCTAGGGGTGGTGGCGCACAGTGAGACCGTGCAATGG
CTGTATACACTGTGTGCAAGCCTGTCCCGCTTGGTGGTAAAGACAGCCCTGAAGCTGCTGCTGG
TGTTTGTGGAGTATTCTGAGAACAATGCACCGCTCTTCATCCAGGCAGTCAACGCTGTAGCCAG
CAACACCGGTACTCTTCCCTGGGCCAACTTGGTGTCCATCCTGGAGGAGAAGAATGGAGTTGAT
CCAGAGCTGTTGGTGTACACGGTCACTCTCATTAACAAGACACTGGCGGCGCTCCCAGACCAGG
ACTCCTTCTATGATGTGACAGATGCTTTTGAGCAGCAGGGCATGGAAGCGCTGGTCCAACGTCT
CTTGGGCACTGCTGGCACTGATGTTGACCTGCGAACACAGCTAACGCTCTATGAGAGCGCCCTT
CGGTTAGAGGATGGAGATATGGAAGAGGCTGCAGCTGCTGCAGCTGCAGGTGGCCGACGAGAGC
GACGGAAGCCATCCTCAGAGGAGGGCAAAAGGAGCCGAAGATCACTAGAAGGTGGAGGCTGTCC
TGTGCGTACCCCAGAACCTGGCCCAACAGGCTCTGCCTCTCCAGTAGGCTCCGCCTCCTTCACT
GACTCCACCTCGCCTACAAGTTCGGCCTTCAGCCCTACTGGCCCAGCCTCTGGTCTTCATACCT
CAGTGAACCTCTTTCCTACCATTTCTGTGGGGCCCTCAGTGGACACTTCCTGTGAGAGAAGTGT
CTACAAAGCCCGGTTTCTGGAGAATGTGGCAGCAGCAGAGACAGAGAAGCAGGCTGCTCTGGCC
CAAGGCCGAGCAGAGACGCTGGCAGGGGCAACAGTGGATGAGACAGATGAGTCATCAGGCACCA
GGGAACTGTGGGACTCTTCAGAGCCAGCCTCTGCACCCAGACCACCTCAGAGCCCTGTTTCCCC
AATCGTGCTGCGGACCCAGAGAAGTCTTGAGCCTGAGCCCAAGGAGCCAGTGTCACCACGAAGC
CCTAAGACTGAGCCTGTCCAGGAGCTTCCTACTCACGTACCCAAGCTCTGCATTGGAGACTTGG
ACTTCTCAGATCTAGGGGAGGATGAAGACCAGGACACATTGAATGTGGAATCTGTGGAGGCTGG
AAAAGCATCCCTGGTCCTGTCACTTCCACCGTCTTCATTCTCTGGGGGTCCCCCTCCTCCCCCC
CCACCTCCCCCACCCATCATAGTCTCCTGTCCACCACCTCCACCCCCACCTCCCCCACCCATCA
TGGGCTCCTGCCTACCACCTCCACCCCTGGCTGCTCCTTTTCCCCACTCAGCCCTTGACGGCCC
AAGGCACCCCACCAAAAGGAAGACTGTAAAACTTTTCTGGCGGGAACTAAAGCCGACTGGGAGC
CCTGGGTGTTCTAGAAGCCGCTTTGGGCCTTGTCCTACCTTGTGGGCCTCTCTGGAACCTGTCT
CGGTGGACACAGCCCGGCTGGAACACCTATTTGAGTCCCGAGCCAAGGATGTGCTACCCACCAA
GAAAGCTGGTGAGGGCCGCCGGACAATGACCATAGTTCTGGACCCCAAGCGCAGCAATGCCATC
AACATTGGCCTAACCACTCTGCCACCTGTGCATGTCATCAAGGCTGCTCTGCTCAACTTTGATG
AATTTGCTGTCAGCAAGGATGGTATTGAGAAACTGCTGACCATGATGCCCACGGAGGAAGAGCG
ACAGAAGATTGAGGAAGCCCAGCTGGCCAACCCTGATGTGCCCCTCGGCCCAGCTGAGAATTTC
CTGATGACTCTTGCTTCCATTGGAGGCCTGGCCGCGCGCCTGCAACTCTGGGCTTTCAAGCTGG
ACTATGAAAGCATGGAGCGGGAAATTGCAGAGCCACTGTTTGATCTGAAAGTGGGCATGGAACA
GTTGGTGCACAATGCCACCTTCCGTTGCATTCTGGCTACCCTTTTGGCTGTGGGCAACTTCCTC
AATGGCTCCCAGAGCAGTGGCTTTGAGCTGAGCTACCTGGAGAAGGTGTCAGAAGTAAAGGACA
CAGTGCGCCGGCAGTCACTGCTGTATCATCTCTGTTCCCTGGTGCTCCAGACCCGACCTGATTC
CTCTGACCTCTACTCAGAAATTCCTGCCCTCACCCGCTGTGCCAAGGTGGACTTTGAGCAGCTG
ACTGAGAACCTAGGGCAGCTGGAGTGCCGGAGCCAGGCTGCTGAGGACAGCCTCCGGAGCTTGG
CAAAGCATGAGCTATCCCCAGCTCTGCGTGCCCGCCTTACCCACTTCCTGGCCCAATGTACCCG
CCGAGTAGCCATGCTAAGAGTAGTACACCGTCGAGTCTGCAACAGGTTCCACGCCTTCCTTCTC
TACTTGGGCTACACCGCACAGGCAGCAAGGGAAGTACGCATCATGCAGTTCTGTCACACGCTCA
GAGAGTTTGCACTTGAGTATCGGACTTGTCGGGAGCGGGTACTGCAGCAGCAGCAGAAACGGGC
TACATACCGCGAACGCAACAAGACCCGGGGTCGCATGATTACTGAGACAGAGAAGTTCTCGGGT
GTGGCTGGGGAGGTCCCCAGTAACCTGTCTGTCCCAGTGGCTGTGGGCAGCGGGCCAGGTCGGG
GTGATGCTGACAATCATGCCAGTATGAAGAGTTTGCTTACCAGCAGGCCAGAAGACGCCACACA
CAGCCGACGTAGCAGAGGTATGGTCCAGAGTAGTTCCCCCGTCACACACACAACAGTAGGGCCC
TTCACTGCATCCCCTGAGGAGACTGCAGCCTCTGGTTTACCTAGTGACACATCAGATGAGATAA
TGGACCTGCTGGTGCAGTCAGTCACCAAGAGCAGTCCTAGAGCCTTGGCTGCTCGGGAGAGGAA
GCGCTCTCGTGGCAACCGGAAGTCCTTGAGGCGGACATTGAAGAGTGGACTTGGAGATGACCTG
GTGCAGGCACTGGGACTAAGCAAAGCTCCTGGCCTAGAGGTGTAAGGGTGCTGCCACACCTGGA
GCTGAGCAGAGAGGGCGCAGAGCACAAACCTGGTTTCAGAAGCTTGCACCCAGAAACCAGCATT
GTGAACAGTATTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAC
ACATACATGTATTTCGCATATGTGAGTTCCCTATTCGGAACAAAATAAAGTTTACCTAGCTAAT
CCAAAA

hide sequence

RefSeq Acc Id:

XM_039097608 ⟹ XP_038953536

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	19	33,206,492 - 33,224,948 (-)	NCBI

RefSeq Acc Id:

XM_039097609 ⟹ XP_038953537

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	19	33,208,651 - 33,225,448 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178529	(Get FASTA)	NCBI Sequence Viewer
	XP_008770705	(Get FASTA)	NCBI Sequence Viewer
	XP_008770706	(Get FASTA)	NCBI Sequence Viewer
	XP_038953536	(Get FASTA)	NCBI Sequence Viewer
	XP_038953537	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL92372	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001178529 ⟸ NM_001191600

- UniProtKB:

A0A0G2JZ38 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAGEEERGDGDPVSVVTVRVQYLEDTDPFACANFPEPRRAPTCSLDGALPLSAQIPALHRLLGA
PLKLEDCALQVSPSGYYLDPELSLEEQREMLEGFYEEISKGRKPTLILRTQLSVRVNAILEKLY
GSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVD
GMLGVVAHSETVQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIQAVNAVASNTGTLPW
ANLVSILEEKNGVDPELLVYTVTLINKTLAALPDQDSFYDVTDAFEQQGMEALVQRLLGTAGTD
VDLRTQLTLYESALRLEDGDMEEAAAAAAAGGRRERRKPSSEEGKRSRRSLEGGGCPVRTPEPG
PTGSASPVGSASFTDSTSPTSSAFSPTGPASGLHTSVNLFPTISVGPSVDTSCERSVYKARFLE
NVAAAETEKQAALAQGRAETLAGATVDETDESSGTRELWDSSEPASAPRPPQSPVSPIVLRTQR
SLEPEPKEPVSPRSPKTEPVQELPTHVPKLCIGDLDFSDLGEDEDQDTLNVESVEAGKASLVLS
LPPPPPPPPPPPIMGSCLPPPPLAAPFPHSALDGPRHPTKRKTVKLFWRELKPTGSPGCSRSRF
GPCPTLWASLEPVSVDTARLEHLFESRAKDVLPTKKAGEGRRTMTIVLDPKRSNAINIGLTTLP
PVHVIKAALLNFDEFAVSKDGIEKLLTMMPTEEERQKIEEAQLANPDVPLGPAENFLMTLASIG
GLAARLQLWAFKLDYESMEREIAEPLFDLKVGMEQLVHNATFRCILATLLAVGNFLNGSQSSGF
ELSYLEKVSEVKDTVRRQSLLYHLCSLVLQTRPDSSDLYSEIPALTRCAKVDFEQLTENLGQLE
CRSQAAEDSLRSLAKHELSPALRARLTHFLAQCTRRVAMLRVVHRRVCNRFHAFLLYLGYTAQA
AREVRIMQFCHTLREFALEYRTCRERVLQQQQKRATYRERNKTRGRMITETEKFSGVAGEVPSN
LSVPVAVGSGPGRGDADNHASMKSLLTSRPEDATHSRRSRGMVQSSSPVTHTTVGPFTASPEET
AASGLPSDTSDEIMDLLVQSVTKSSPRALAARERKRSRGNRKSLRRTLKSGLGDDLVQALGLSK
APGLEV

hide sequence

RefSeq Acc Id:

XP_008770706 ⟸ XM_008772484

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAGEEERGDGDPVSVVTVRVQYLEDTDPFACANFPEPRRAPTCSLDGALPLSAQIPALHRLLGA
PLKLEDCALQVSPSGYYLDPELSLEEQREMLEGFYEEISKGRKPTLILRTQLSVRVNAILEKLY
GSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVD
GMLGVVAHSETVQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIQAVNAVASNTGTLPW
ANLVSILEEKNGVDPELLVYTVTLINKTLAALPDQDSFYDVTDAFEQQGMEALVQRLLGTAGTD
VDLRTQLTLYESALRLEDGDMEEAAAAAAAGGRRERRKPSSEEGKRSRRSLEGGGCPVRTPEPG
PTGSASPVGSASFTDSTSPTSSAFSPTGPASGLHTSVNLFPTISVGPSVDTSCERSVYKARFLE
NVAAAETEKQAALAQGRAETLAGATVDETDESSGTRELWDSSEPASAPRPPQSPVSPIVLRTQR
SLEPEPKEPVSPRSPKTEPVQELPTHVPKLCIGDLDFSDLGEDEDQDTLNVESVEAGKASLVLS
LPPSSFSGGPPPPPPPPPPIIVSCPPPPPPPPPPIMGSCLPPPPLAAPFPHSALDGPRHPTKRK
TVKLFWRELKPTGSPGCSRSRFGPCPTLWASLEPVSVDTARLEHLFESRAKDVLPTKKAGEGRR
TMTIVLDPKRSNAINIGLTTLPPVHVIKAALLNFDEFAVSKDGIEKLLTMMPTEEERQKIEEAQ
LANPDVPLGPAENFLMTLASIGGLAARLQLWAFKLDYESMEREIAEPLFDLKVGMEQLVHNATF
RCILATLLAVGNFLNGSQSSGFELSYLEKVSEVKDTVRRQSLLYHLCSLVLQTRPDSSDLYSEI
PALTRCAKVDFEQLTENLGQLECRSQAAEDSLRSLAKHELSPALRARLTHFLAQCTRRVAMLRV
VHRRVCNRFHAFLLYLGYTAQAAREVRIMQFCHTLREFALEYRTCRERVLQQQQKRATYRERNK
TRGRMITETEKFSGVAGEVPSNLSVPVAVGSGPGRGDADNHASMKSLLTSRPEDATHSRRSRGM
VQSSSPVTHTTVGPFTASPEETAASGLPSDTSDEIMDLLVQSVTKSSPRALAARERKRSRGNRK
SLRRTLKSGLGDDLVQALGLSKAPGLEV

hide sequence

RefSeq Acc Id:

XP_008770705 ⟸ XM_008772483

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAGEEERGDGDPVSVVTVRVQYLEDTDPFACANFPEPRRAPTCSLDGALPLSAQIPALHRLLGA
PLKLEDCALQVSPSGYYLDPELSLEEQREMLEGFYEEISKGRKPTLILRTQLSVRVNAILEKLY
GSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVD
GMLGVVAHSETVQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIQAVNAVASNTGTLPW
ANLVSILEEKNGVDPELLVYTVTLINKTLAALPDQDSFYDVTDAFEQQGMEALVQRLLGTAGTD
VDLRTQLTLYESALRLEDGDMEEAAAAAAAGGRRERRKPSSEEGKRSRRSLEGGGCPVRTPEPG
PTGSASPVGSASFTDSTSPTSSAFSPTGPASGLHTSVNLFPTISVGPSVDTSCERSVYKLHQTA
PICSPESLPVPQSLTGQARLEARFLENVAAAETEKQAALAQGRAETLAGATVDETDESSGTREL
WDSSEPASAPRPPQSPVSPIVLRTQRSLEPEPKEPVSPRSPKTEPVQELPTHVPKLCIGDLDFS
DLGEDEDQDTLNVESVEAGKASLVLSLPPSSFSGGPPPPPPPPPPIIVSCPPPPPPPPPPIMGS
CLPPPPLAAPFPHSALDGPRHPTKRKTVKLFWRELKPTGSPGCSRSRFGPCPTLWASLEPVSVD
TARLEHLFESRAKDVLPTKKAGEGRRTMTIVLDPKRSNAINIGLTTLPPVHVIKAALLNFDEFA
VSKDGIEKLLTMMPTEEERQKIEEAQLANPDVPLGPAENFLMTLASIGGLAARLQLWAFKLDYE
SMEREIAEPLFDLKVGMEQLVHNATFRCILATLLAVGNFLNGSQSSGFELSYLEKVSEVKDTVR
RQSLLYHLCSLVLQTRPDSSDLYSEIPALTRCAKVDFEQLTENLGQLECRSQAAEDSLRSLAKH
ELSPALRARLTHFLAQCTRRVAMLRVVHRRVCNRFHAFLLYLGYTAQAAREVRIMQFCHTLREF
ALEYRTCRERVLQQQQKRATYRERNKTRGRMITETEKFSGVAGEVPSNLSVPVAVGSGPGRGDA
DNHASMKSLLTSRPEDATHSRRSRGMVQSSSPVTHTTVGPFTASPEETAASGLPSDTSDEIMDL
LVQSVTKSSPRALAARERKRSRGNRKSLRRTLKSGLGDDLVQALGLSKAPGLEV

hide sequence

RefSeq Acc Id:

ENSRNOP00000070898 ⟸ ENSRNOT00000084734

RefSeq Acc Id:	XP_038953536 ⟸ XM_039097608
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038953537 ⟸ XM_039097609
- Peptide Label:	isoform X4

Protein Domains

FH2 GBD/FH3

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701074

Promoter ID:

EPDNEW_R11597

Type:

multiple initiation site

Name:

Fhod1_1

Description:

formin homology 2 domain containing 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	19	37,303,838 - 37,303,898	EPDNEW

Strain Variation

Strain Sequence Variants (Rnor 6.0)

ACI/EurMcwi (MCW)

Visual

CSV

TAB

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

ACI/EurMcwi (RGD)

Visual

CSV

TAB

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

ACI/N (MCW)

Visual

CSV

TAB

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

BBDP/Wor (RGD)

Visual

CSV

TAB

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

BN/SsN (MCW)

Visual

CSV

TAB

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Buf/N (MCW)

Visual

CSV

TAB

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

COP/CrCrl (MCW & UW)

Visual

CSV

TAB

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob) University of Wisconsin (Dr. James Shull)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Charles River Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob) and UW Madison (Dr. James Shull)

F344/NCrl (RGD)

Visual

CSV

TAB

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

F344/NRrrc (MCW)

Visual

CSV

TAB

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

FHH/EurMcwi (MCW)

Visual

CSV

TAB

Printer

Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHH/EurMcwi (RGD)

Visual

CSV

TAB

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

FHL/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHL/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

GH/OmrMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

GK/Ox (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LE/Stm (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/Crl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/NCrlBR (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LH/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LL/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LN/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

M520/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

MHS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MNS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MR/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

SBH/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBH/Ygl sequenced by MCW

SBH/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SBN/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBN/Ygl sequenced by MCW

SBN/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHR/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHRSP/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SR/JrHsd (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Harlan Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SR/JrHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/Jr (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/JrHsdMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SS/JrHsdMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WAG/Rij (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

WKY/NCrl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WN/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Damaging Variants

Assembly: Rnor_6.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain
19	37303736	37303737	G	A	snv	ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), SBH/Ygl (MCW), SBN/Ygl (MCW), ACI/N (MCW), WKY/NHsd (RGD), LE/Stm (RGD), SBH/Ygl (RGD), SBN/Ygl (RGD), WKY/NCrl (RGD), ACI/EurMcwi (RGD)

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1589776	AgrOrtholog
Ensembl Genes	ENSRNOG00000054625	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000070898	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000084734	ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.2220	UniProtKB/TrEMBL
	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	FH2_actin-bd	UniProtKB/TrEMBL
	FH2_Formin_sf	UniProtKB/TrEMBL
	FHDC1	UniProtKB/TrEMBL
	FHOD1_GBD_N	UniProtKB/TrEMBL
	GTPase-bd/formin_homology_3	UniProtKB/TrEMBL
KEGG Report	rno:291964	UniProtKB/TrEMBL
NCBI Gene	291964	ENTREZGENE
PANTHER	PTHR45920:SF2	UniProtKB/TrEMBL
Pfam	FH2	UniProtKB/TrEMBL
	Formin_GBD_N	UniProtKB/TrEMBL
PhenoGen	Fhod1	PhenoGen
PROSITE	FH2	UniProtKB/TrEMBL
	GBD_FH3	UniProtKB/TrEMBL
SMART	FH2	UniProtKB/TrEMBL
Superfamily-SCOP	ARM-type_fold	UniProtKB/TrEMBL
UniProt	A0A0G2JZ38	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-04	Fhod1	formin homology 2 domain containing 1	LOC291964	similar to FH1/FH2 domain-containing protein (Formin homolog overexpressed in spleen) (FHOS) (Formin homology 2 domain-containing protein 1)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-20	LOC291964	similar to FH1/FH2 domain-containing protein (Formin homolog overexpressed in spleen) (FHOS) (Formin homology 2 domain-containing protein 1)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)