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Gene: Vps9d1 (VPS9 domain containing 1) Rattus norvegicus
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Symbol: Vps9d1
Name: VPS9 domain containing 1
Description: Orthologous to human VPS9D1 (VPS9 domain containing 1); INTERACTS WITH (RS)-amphetamine; bisphenol A; aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical protein LOC307923; LOC307923; RGD1565149; similar to chromosome 16 open reading frame 7; uncharacterized protein LOC307923; VPS9 domain-containing protein 1
Orthologs:
Homo sapiens (human) : VPS9D1 (VPS9 domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Vps9d1 (VPS9 domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps9d1 (VPS9 domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS9D1 (VPS9 domain containing 1)
Canis lupus familiaris (dog) : VPS9D1 (VPS9 domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps9d1 (VPS9 domain containing 1)
Sus scrofa (pig) : VPS9D1 (VPS9 domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01956,040,527 - 56,054,199 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01966,745,400 - 66,759,058 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41953,560,828 - 53,574,437 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1950,512,859 - 50,526,474 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vps9d1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565149
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.