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Gene: Adat1 (adenosine deaminase, tRNA-specific 1) Rattus norvegicus
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Symbol: Adat1
Name: adenosine deaminase, tRNA-specific 1
Description: Predicted to have RNA binding activity and tRNA-specific adenosine deaminase activity. Predicted to be involved in tRNA processing. Orthologous to human ADAT1 (adenosine deaminase tRNA specific 1); INTERACTS WITH amphetamine; bisphenol A; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC690810; similar to adenosine deaminase, tRNA-specific 1; tRNA-specific adenosine deaminase 1
Orthologs:
Homo sapiens (human) : ADAT1 (adenosine deaminase tRNA specific 1)  HGNC  Alliance
Mus musculus (house mouse) : Adat1 (adenosine deaminase, tRNA-specific 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Adat1 (adenosine deaminase tRNA specific 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ADAT1 (adenosine deaminase tRNA specific 1)
Canis lupus familiaris (dog) : ADAT1 (adenosine deaminase tRNA specific 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Adat1 (adenosine deaminase tRNA specific 1)
Sus scrofa (pig) : ADAT1 (adenosine deaminase tRNA specific 1)
Chlorocebus sabaeus (African green monkey) : ADAT1 (adenosine deaminase tRNA specific 1)
Heterocephalus glaber (naked mole-rat) : Adat1 (adenosine deaminase tRNA specific 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01944,172,496 - 44,212,147 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1944,187,331 - 44,211,208 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01954,979,589 - 55,017,852 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41941,902,820 - 41,926,545 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1939,293,603 - 39,317,329 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Adat1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1591020
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.