Mmaa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 19 | 45,523,352 - 45,553,602 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 28,619,060 - 28,649,319 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 28,619,087 - 28,649,319 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 19 | 35,474,544 - 35,504,160 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 19 | 36,128,620 - 36,158,234 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 19 | 38,364,327 - 38,393,832 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 19 | 32,294,087 - 32,325,927 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 19 | 32,308,236 - 32,325,927 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 43,190,826 - 43,222,204 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 19 | 30,455,554 - 30,487,154 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 19 | 30,474,283 - 30,490,378 (+) | NCBI | | | | | Celera | 19 | 28,128,651 - 28,159,788 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | q11 | NCBI | | | | |
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MMAA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 145,619,385 - 145,660,033 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 145,599,042 - 145,660,033 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 146,540,537 - 146,581,185 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 146,779,677 - 146,796,187 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 146,917,831 - 146,934,342 | NCBI | | | | | Celera | 4 | 143,868,075 - 143,908,722 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q31.21 | NCBI | | | | | HuRef | 4 | 142,270,497 - 142,311,145 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 146,517,133 - 146,557,773 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 148,935,202 - 148,975,850 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Mmaa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 79,990,226 - 80,021,637 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 79,990,227 - 80,021,566 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 79,263,597 - 79,295,002 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 79,263,598 - 79,294,937 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 81,790,323 - 81,818,855 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 82,162,496 - 82,191,009 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 83,543,391 - 83,571,923 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | C1 | NCBI | | | | | cM Map | 8 | 37.51 | NCBI | | | | |
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Mmaa (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955428 | 1,473,898 - 1,489,665 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955428 | 1,465,118 - 1,489,332 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MMAA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 143,491,406 - 143,536,113 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 143,857,581 - 143,901,095 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 137,960,877 - 138,001,384 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 149,620,309 - 149,658,476 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 149,620,381 - 149,658,470 (+) | Ensembl | panpan1.1 | | panPan2 | |
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MMAA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 15 | 44,221,082 - 44,243,530 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 15 | 44,220,934 - 44,241,101 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 15 | 44,613,175 - 44,636,041 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 44,889,029 - 44,911,731 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 44,889,055 - 44,913,640 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 15 | 44,162,432 - 44,185,204 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 44,249,533 - 44,272,215 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 44,514,450 - 44,537,173 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mmaa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405301 | 46,074,045 - 46,100,714 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936535 | 3,511,349 - 3,525,507 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936535 | 3,511,389 - 3,538,038 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LOC100523624 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 8 | 82,802,287 - 82,829,975 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 Ensembl | 8 | 82,834,595 - 82,864,828 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 82,765,074 - 82,864,829 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 88,144,860 - 88,168,941 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MMAA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 7 | 92,180,963 - 92,218,068 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 92,201,805 - 92,220,163 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 71,831,219 - 71,869,704 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mmaa (Heterocephalus glaber - naked mole-rat) |
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