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Gene: Zcchc14 (zinc finger CCHC-type containing 14) Rattus norvegicus

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Symbol:

Zcchc14

Name:

zinc finger CCHC-type containing 14

RGD ID:

1309494

Description:

Predicted to enable nucleic acid binding activity; phosphatidylinositol binding activity; and zinc ion binding activity. Orthologous to human ZCCHC14 (zinc finger CCHC-type containing 14); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC365018; RGD1309494; similar to M-BDG29; zinc finger CCHC domain-containing protein 14; zinc finger, CCHC domain containing 14

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	66,582,800 - 66,627,136 (-)	NCBI		GRCr8
mRatBN7.2	19	49,674,185 - 49,718,004 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	49,674,195 - 49,718,029 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	19	53,644,500 - 53,688,624 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	53,647,815 - 53,688,597 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	64,381,938 - 64,426,070 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	51,858,907 - 51,899,663 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	51,863,747 - 51,904,544 (-)	NCBI
Celera	19	48,921,002 - 48,964,690 (-)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zcchc14	Rat	16Q24.3 Microdeletion Syndrome		ISO	ZCCHC14 (Homo sapiens)	8554872	ClinVar Annotator: match by term: 16q24.3 microdeletion syndrome	ClinVar
Zcchc14	Rat	KBG syndrome		ISO	ZCCHC14 (Homo sapiens)	8554872	ClinVar Annotator: match by term: KBG syndrome	ClinVar	PMID:31690835
Zcchc14	Rat	persistent fetal circulation syndrome		ISO	ZCCHC14 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital alveolar capillary dysplasia	ClinVar

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zcchc14	Rat	Stroke		ISO	ZCCHC14 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:29531354

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zcchc14	Rat	1,2-dichloroethane	decreases expression	ISO	Zcchc14 (Mus musculus)	6480464	ethylene dichloride results in decreased expression of ZCCHC14 mRNA	CTD	PMID:28960355
Zcchc14	Rat	1,2-dimethylhydrazine	increases expression	ISO	Zcchc14 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in increased expression of ZCCHC14 mRNA	CTD	PMID:22206623
Zcchc14	Rat	17alpha-ethynylestradiol	increases expression	EXP		6480464	Ethinyl Estradiol results in increased expression of ZCCHC14 mRNA	CTD	PMID:29097150
Zcchc14	Rat	17beta-estradiol	multiple interactions	ISO	ZCCHC14 (Homo sapiens)	6480464	[Progesterone co-treated with Estradiol] results in decreased expression of ZCCHC14 mRNA	CTD	PMID:17404688
Zcchc14	Rat	17beta-estradiol	decreases expression	ISO	Zcchc14 (Mus musculus)	6480464	Estradiol results in decreased expression of ZCCHC14 mRNA	CTD	PMID:39298647
Zcchc14	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Zcchc14 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of ZCCHC14 mRNA	CTD	PMID:21570461
Zcchc14	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of ZCCHC14 mRNA	CTD	PMID:33387578
Zcchc14	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of ZCCHC14 mRNA	CTD	PMID:32109520
Zcchc14	Rat	2-methylcholine	affects expression	ISO	ZCCHC14 (Homo sapiens)	6480464	beta-methylcholine affects the expression of ZCCHC14 mRNA	CTD	PMID:21179406
Zcchc14	Rat	4,4'-sulfonyldiphenol	decreases expression	ISO	Zcchc14 (Mus musculus)	6480464	bisphenol S results in decreased expression of ZCCHC14 mRNA	CTD	PMID:39298647
Zcchc14	Rat	4,4'-sulfonyldiphenol	decreases methylation	ISO	ZCCHC14 (Homo sapiens)	6480464	bisphenol S results in decreased methylation of ZCCHC14 gene	CTD	PMID:31601247
Zcchc14	Rat	acrylamide	decreases expression	EXP		6480464	Acrylamide results in decreased expression of ZCCHC14 mRNA	CTD	PMID:28959563
Zcchc14	Rat	aflatoxin B1	decreases methylation	ISO	ZCCHC14 (Homo sapiens)	6480464	Aflatoxin B1 results in decreased methylation of ZCCHC14 gene	CTD	PMID:27153756
Zcchc14	Rat	all-trans-retinoic acid	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Tretinoin results in increased expression of ZCCHC14 mRNA	CTD	PMID:23724009
Zcchc14	Rat	all-trans-retinoic acid	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Tretinoin results in decreased expression of ZCCHC14 mRNA	CTD	PMID:33167477
Zcchc14	Rat	antirheumatic drug	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Antirheumatic Agents results in decreased expression of ZCCHC14 mRNA	CTD	PMID:24449571
Zcchc14	Rat	arsane	affects methylation	ISO	ZCCHC14 (Homo sapiens)	6480464	Arsenic affects the methylation of ZCCHC14 gene	CTD	PMID:25304211
Zcchc14	Rat	arsenic atom	affects methylation	ISO	ZCCHC14 (Homo sapiens)	6480464	Arsenic affects the methylation of ZCCHC14 gene	CTD	PMID:25304211
Zcchc14	Rat	arsenite(3-)	multiple interactions	ISO	ZCCHC14 (Homo sapiens)	6480464	arsenite inhibits the reaction [G3BP1 protein binds to ZCCHC14 mRNA]	CTD	PMID:32406909
Zcchc14	Rat	benzene	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Benzene results in increased expression of ZCCHC14 mRNA	CTD	PMID:19162166
Zcchc14	Rat	benzo[a]pyrene	multiple interactions	ISO	Zcchc14 (Mus musculus)	6480464	AHR protein affects the reaction [Benzo(a)pyrene affects the expression of ZCCHC14 mRNA]	CTD	PMID:22228805
Zcchc14	Rat	benzo[a]pyrene	increases methylation	ISO	ZCCHC14 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of ZCCHC14 3' UTR	CTD	PMID:27901495
Zcchc14	Rat	benzo[a]pyrene	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased expression of ZCCHC14 mRNA	CTD	PMID:26238291
Zcchc14	Rat	benzo[a]pyrene diol epoxide I	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	7 more ...	CTD	PMID:19150397
Zcchc14	Rat	Benzo[k]fluoranthene	decreases expression	ISO	Zcchc14 (Mus musculus)	6480464	benzo(k)fluoranthene results in decreased expression of ZCCHC14 mRNA	CTD	PMID:26377693
Zcchc14	Rat	bis(2-ethylhexyl) phthalate	increases expression	ISO	Zcchc14 (Mus musculus)	6480464	Diethylhexyl Phthalate results in increased expression of ZCCHC14 mRNA	CTD	PMID:34319233
Zcchc14	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of ZCCHC14 mRNA	CTD	PMID:25181051 and PMID:32528016
Zcchc14	Rat	bisphenol A	decreases methylation	ISO	ZCCHC14 (Homo sapiens)	6480464	bisphenol A results in decreased methylation of ZCCHC14 gene	CTD	PMID:31601247
Zcchc14	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of ZCCHC14 mRNA	CTD	PMID:34947998 and PMID:38750585
Zcchc14	Rat	bisphenol A	affects expression	EXP		6480464	bisphenol A affects the expression of ZCCHC14 mRNA	CTD	PMID:30816183
Zcchc14	Rat	bisphenol A	increases methylation	ISO	Zcchc14 (Mus musculus)	6480464	bisphenol A results in increased methylation of ZCCHC14 promoter	CTD	PMID:27312807
Zcchc14	Rat	cadmium dichloride	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Cadmium Chloride results in increased expression of ZCCHC14 mRNA	CTD	PMID:38382870
Zcchc14	Rat	carbamazepine	affects expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Carbamazepine affects the expression of ZCCHC14 mRNA	CTD	PMID:25979313
Zcchc14	Rat	CGP 52608	multiple interactions	ISO	ZCCHC14 (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to ZCCHC14 gene]	CTD	PMID:28238834
Zcchc14	Rat	choline	multiple interactions	ISO	Zcchc14 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased expression of ZCCHC14 mRNA	CTD	PMID:20938992
Zcchc14	Rat	clobetasol	decreases expression	ISO	Zcchc14 (Mus musculus)	6480464	Clobetasol results in decreased expression of ZCCHC14 mRNA	CTD	PMID:27462272
Zcchc14	Rat	copper(II) sulfate	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Copper Sulfate results in decreased expression of ZCCHC14 mRNA	CTD	PMID:19549813
Zcchc14	Rat	crocidolite asbestos	decreases expression	ISO	Zcchc14 (Mus musculus)	6480464	Asbestos and Crocidolite results in decreased expression of ZCCHC14 mRNA	CTD	PMID:29279043
Zcchc14	Rat	Cuprizon	increases expression	EXP		6480464	Cuprizone results in increased expression of ZCCHC14 mRNA	CTD	PMID:27523638
Zcchc14	Rat	cyclosporin A	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Cyclosporine results in decreased expression of ZCCHC14 mRNA	CTD	PMID:25562108
Zcchc14	Rat	dicrotophos	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	dicrotophos results in increased expression of ZCCHC14 mRNA	CTD	PMID:28302478
Zcchc14	Rat	doxorubicin	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Doxorubicin results in increased expression of ZCCHC14 mRNA	CTD	PMID:29803840
Zcchc14	Rat	epoxiconazole	decreases expression	ISO	Zcchc14 (Mus musculus)	6480464	epoxiconazole results in decreased expression of ZCCHC14 mRNA	CTD	PMID:35436446
Zcchc14	Rat	ethanol	affects splicing	ISO	Zcchc14 (Mus musculus)	6480464	Ethanol affects the splicing of ZCCHC14 mRNA	CTD	PMID:30319688
Zcchc14	Rat	folic acid	multiple interactions	ISO	Zcchc14 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased expression of ZCCHC14 mRNA	CTD	PMID:20938992
Zcchc14	Rat	formaldehyde	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Formaldehyde results in decreased expression of ZCCHC14 mRNA	CTD	PMID:20655997
Zcchc14	Rat	formaldehyde	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Formaldehyde results in increased expression of ZCCHC14 mRNA	CTD	PMID:23649840
Zcchc14	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of ZCCHC14 mRNA	CTD	PMID:33387578
Zcchc14	Rat	hydrogen peroxide	affects expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Hydrogen Peroxide affects the expression of ZCCHC14 mRNA	CTD	PMID:21179406
Zcchc14	Rat	iron dichloride	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	ferrous chloride results in decreased expression of ZCCHC14 mRNA	CTD	PMID:35984750
Zcchc14	Rat	L-methionine	multiple interactions	ISO	Zcchc14 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased expression of ZCCHC14 mRNA	CTD	PMID:20938992
Zcchc14	Rat	menadione	affects expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Vitamin K 3 affects the expression of ZCCHC14 mRNA	CTD	PMID:20044591
Zcchc14	Rat	nickel sulfate	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	nickel sulfate results in increased expression of ZCCHC14 mRNA	CTD	PMID:22714537
Zcchc14	Rat	paracetamol	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Acetaminophen results in increased expression of ZCCHC14 mRNA	CTD	PMID:29067470
Zcchc14	Rat	paracetamol	increases expression	EXP		6480464	Acetaminophen results in increased expression of ZCCHC14 mRNA	CTD	PMID:33387578
Zcchc14	Rat	phenobarbital	affects expression	ISO	Zcchc14 (Mus musculus)	6480464	Phenobarbital affects the expression of ZCCHC14 mRNA	CTD	PMID:23091169
Zcchc14	Rat	progesterone	multiple interactions	ISO	ZCCHC14 (Homo sapiens)	6480464	[Progesterone co-treated with Estradiol] results in decreased expression of ZCCHC14 mRNA	CTD	PMID:17404688
Zcchc14	Rat	quercitrin	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	quercitrin results in increased expression of ZCCHC14 mRNA	CTD	PMID:25193878
Zcchc14	Rat	silicon dioxide	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Silicon Dioxide results in decreased expression of ZCCHC14 mRNA	CTD	PMID:25351596
Zcchc14	Rat	sodium arsenite	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	sodium arsenite results in decreased expression of ZCCHC14 mRNA	CTD	PMID:25879800
Zcchc14	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of ZCCHC14 mRNA	CTD	PMID:34492290
Zcchc14	Rat	thiram	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Thiram results in increased expression of ZCCHC14 mRNA	CTD	PMID:38568856
Zcchc14	Rat	titanium dioxide	decreases methylation	ISO	Zcchc14 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of ZCCHC14 promoter	CTD	PMID:35295148
Zcchc14	Rat	trichostatin A	affects expression	ISO	ZCCHC14 (Homo sapiens)	6480464	trichostatin A affects the expression of ZCCHC14 mRNA	CTD	PMID:28542535
Zcchc14	Rat	triphenyl phosphate	affects expression	ISO	ZCCHC14 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of ZCCHC14 mRNA	CTD	PMID:37042841
Zcchc14	Rat	troglitazone	decreases expression	ISO	Zcchc14 (Mus musculus)	6480464	troglitazone results in decreased expression of ZCCHC14 mRNA	CTD	PMID:28973697
Zcchc14	Rat	urethane	increases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Urethane results in increased expression of ZCCHC14 mRNA	CTD	PMID:28818685
Zcchc14	Rat	valproic acid	increases methylation	ISO	ZCCHC14 (Homo sapiens)	6480464	Valproic Acid results in increased methylation of ZCCHC14 gene	CTD	PMID:29154799
Zcchc14	Rat	valproic acid	decreases expression	ISO	ZCCHC14 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of ZCCHC14 mRNA	CTD	PMID:37505509

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zcchc14	Rat	nucleic acid binding	enables	IEA	InterPro:IPR001878 and InterPro:IPR036875	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Zcchc14	Rat	phosphatidylinositol binding	enables	IEA	InterPro:IPR036871	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Zcchc14	Rat	protein binding	enables	ISO	ZCCHC14 (Homo sapiens)	1624291	UniProtKB:A8MQ03 more ...	RGD	PMID:32296183
Zcchc14	Rat	zinc ion binding	enables	IEA	UniProtKB-KW:KW-0863	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Zcchc14	Rat	zinc ion binding	enables	IEA	InterPro:IPR001878 and InterPro:IPR036875	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Zcchc14
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	66,582,800 - 66,627,136 (-)	NCBI		GRCr8
mRatBN7.2	19	49,674,185 - 49,718,004 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	49,674,195 - 49,718,029 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	19	53,644,500 - 53,688,624 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	53,647,815 - 53,688,597 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	64,381,938 - 64,426,070 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	51,858,907 - 51,899,663 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	51,863,747 - 51,904,544 (-)	NCBI
Celera	19	48,921,002 - 48,964,690 (-)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

ZCCHC14
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	87,406,248 - 87,493,024 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	87,406,246 - 87,493,024 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	87,439,854 - 87,526,630 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	85,997,353 - 86,082,961 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	85,997,363 - 86,082,966	NCBI
Celera	16	71,736,619 - 71,822,230 (-)	NCBI		Celera
Cytogenetic Map	16	q24.2	NCBI
HuRef	16	73,182,266 - 73,267,848 (-)	NCBI		HuRef
CHM1_1	16	88,851,639 - 88,937,191 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	93,477,129 - 93,563,941 (-)	NCBI		T2T-CHM13v2.0

Zcchc14
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	122,325,442 - 122,379,662 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	122,325,442 - 122,379,640 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	121,598,697 - 121,652,791 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	121,598,703 - 121,652,901 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	124,122,603 - 124,175,833 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	124,485,528 - 124,538,023 (-)	NCBI		MGSCv36	mm8
Celera	8	125,820,046 - 125,873,474 (-)	NCBI		Celera
Cytogenetic Map	8	E1	NCBI
cM Map	8	70.67	NCBI

Zcchc14
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955541	1,872,624 - 1,909,779 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955541	1,872,624 - 1,909,723 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZCCHC14
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	97,165,154 - 97,251,845 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	103,079,289 - 103,168,696 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	68,078,237 - 68,165,406 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	87,401,184 - 87,486,124 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	87,401,184 - 87,486,124 (-)	Ensembl	panpan1.1		panPan2

ZCCHC14
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	65,611,032 - 65,667,162 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	65,611,026 - 65,664,923 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	65,622,560 - 65,679,884 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	65,832,428 - 65,889,740 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	65,830,308 - 65,887,136 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	65,857,317 - 65,914,597 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	65,689,172 - 65,746,484 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	66,103,133 - 66,160,629 (+)	NCBI		UU_Cfam_GSD_1.0

Zcchc14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	25,975,048 - 26,030,891 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936641	1,728,592 - 1,781,896 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936641	1,728,596 - 1,783,710 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZCCHC14
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	1,850,051 - 1,918,704 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	1,849,974 - 1,917,601 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	1,937,818 - 2,005,535 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZCCHC14
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	72,776,249 - 72,863,957 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	72,780,300 - 72,863,860 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	2,832,207 - 2,920,201 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zcchc14
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	3,097,565 - 3,138,799 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	3,096,644 - 3,138,825 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Zcchc14
125 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	159
Count of miRNA genes:	92
Interacting mature miRNAs:	94
Transcripts:	ENSRNOT00000058486, ENSRNOT00000074448
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578764	Stresp19	Stress response QTL 19	3.6	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	19	15630201	57337602	Rat
61350	Bp32	Blood pressure QTL 32		0.012	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	19	20483575	57337602	Rat
5135224	Leukc1	Leukocyte quantity QTL 1			eosinophil quantity (VT:0002602)	blood eosinophil count (CMO:0000033)	19	44340214	55283277	Rat
724546	Kidm3	Kidney mass QTL 3	3.1		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	19	29322490	57337602	Rat
7411549	Bw130	Body weight QTL 130	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	15455860	57337602	Rat
1358200	Insglur2	Insulin/glucose ratio QTL 2	4.1		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	19	33838214	55283146	Rat
724566	Uae12	Urinary albumin excretion QTL 12	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	2187927	56457239	Rat
1331737	Uae29	Urinary albumin excretion QTL 29	5.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	4096155	55283277	Rat
2298478	Eau8	Experimental allergic uveoretinitis QTL 8		0.0163	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	19	17154433	57337602	Rat

BF393292

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	19	49,782,583 - 49,782,699 (+)	MAPPER	mRatBN7.2
Rnor_6.0	19	54,541,965 - 54,542,080	NCBI	Rnor6.0
Rnor_5.0	19	65,257,497 - 65,257,612	UniSTS	Rnor5.0
RGSC_v3.4	19	51,964,744 - 51,964,859	UniSTS	RGSC3.4
Celera	19	49,029,216 - 49,029,331	UniSTS
RH 3.4 Map	19	682.8	UniSTS
Cytogenetic Map	19	q12	UniSTS

RH137961

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	19	49,785,460 - 49,785,699 (+)	MAPPER	mRatBN7.2
Rnor_6.0	19	54,544,842 - 54,545,080	NCBI	Rnor6.0
Rnor_5.0	19	65,260,374 - 65,260,612	UniSTS	Rnor5.0
RGSC_v3.4	19	51,967,621 - 51,967,859	UniSTS	RGSC3.4
Celera	19	49,032,093 - 49,032,331	UniSTS
RH 3.4 Map	19	682.8	UniSTS
Cytogenetic Map	19	q12	UniSTS

RH140237

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	19	49,675,973 - 49,676,157 (+)	MAPPER	mRatBN7.2
mRatBN7.2	2	69,249,793 - 69,249,977 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	70,037,784 - 70,037,967	NCBI	Rnor6.0
Rnor_6.0	19	53,646,289 - 53,646,472	NCBI	Rnor6.0
Rnor_5.0	19	64,383,724 - 64,383,907	UniSTS	Rnor5.0
Rnor_5.0	2	89,761,299 - 89,761,482	UniSTS	Rnor5.0
RGSC_v3.4	2	70,110,996 - 70,111,179	UniSTS	RGSC3.4
RGSC_v3.4	19	51,857,182 - 51,857,365	UniSTS	RGSC3.4
Celera	19	48,922,792 - 48,922,975	UniSTS
Celera	2	65,106,837 - 65,107,020	UniSTS
RH 3.4 Map	19	696.5	UniSTS
Cytogenetic Map	19	q12	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001427306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001079169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006255732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000074448 ⟹ ENSRNOP00000064290

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	19	49,674,195 - 49,718,029 (-)	Ensembl
Rnor_6.0 Ensembl	19	53,647,815 - 53,688,597 (-)	Ensembl

RefSeq Acc Id:

NM_001427306 ⟹ NP_001414235

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	66,582,800 - 66,627,136 (-)	NCBI

RefSeq Acc Id:

XM_006255732 ⟹ XP_006255794

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	66,582,800 - 66,626,617 (-)	NCBI
mRatBN7.2	19	49,674,185 - 49,718,004 (-)	NCBI
Rnor_6.0	19	53,644,500 - 53,688,624 (-)	NCBI
Rnor_5.0	19	64,381,938 - 64,426,070 (-)	NCBI

Sequence:

show sequence

CCGGCGGCGGGCGCGGCGCGGGCGGCAGCATGGTGGAGAAGCGTTGCCCGCTGCAGAGGGACGGCGTGTACCGCTGGTTCTCCGAACTGCCGTCACCGCAGCGCGTGGAGTTCCTGTGCGGCCTGCTG
GACTTGTGCATCCCGCTCGAGTTGCGCTTCCTCGGCTCGTGCCTGGAGGACTTGGCACGCAAGGACTACCATTCGCTGCGCGACTCCGAGATTAAGGCCAACAATCCGGCGGACCTGGGCAGCCTCAC
CAACCTGACGGACGAGGTGGTGCGCAGCAAGCTGTTGGTGTCGCTGGCGCTGCTGGGCTCGGAGCAGCGCGAGGCTGCGGGCGTGTTGTACCGCACGCTCACGCACACCGACTCCATCATCCACAACT
ACGGGCTACAGCTCAACGAGGGCCGCACGGGCGATGAGTTCCTTCTGCTCTTCACCATGGCCTCCAACCACCCGGCCTTCAGCTTCCACCAGAAGCAGGTGCTGCGCCAGGAGCTCACGCAGATCCAG
AGCAGCCTGAACGGTGGCGGTGGCGGCGGCGGCGGCGGTGGTGGCGGTGGCAAGAGCGCGCCCGGGCCCAGCGGCGCGCTGCCCACCTGCTCGGCCTGTCACAAGATGGCTCCCAGAACTGAGACCCC
CGTCAGCAGCATCAGCAACAGTCTGGAGAACGCATTGCATACGTCAGCACATTCCACGGAGGAGGCCCTGCCCAAAAGGCCTTTGGGAAAACATGGCAAAGTGAGTGTTGAAAAGATAGACCTGAAGG
GATTGTCACACACGAAAAGCGACAGAGGCGTTGAGTGCTCCTTTGAGGTCTTATGGTCTGATTCTTCAGTAACTTCAGTAACTAAGTCTTCTTCAGAAGTGACAGAATTTATTTCAAAGTTATCCCAA
CTCTGCCCTGAAGAGAACTTGGACAAACTCATTCCTTGCTTGGCTGGCCCAGATTCCTTCTATGTGGAGCGCAACCACGTTGATTTGGAAGCAGGCCTAAGGTTCTTGGCTTCAATCCCGGCCCACAC
ACTGAAGCACGACCACGTCAGGAAGTTCTTCAGTGCTTCATCTCCCTCCCAACAGCTCCAAAGTCCAAGTCCTGGCAACCCCTCCCCTCCTAAAGTGGGCGCCATGATGGGCGTGTCTGGAAGGCCTG
TGTGTGGCGTGGCTGGCATCCCATCCTCGCAGAGCAGCACCCAGCACCACCTGCAACACTCGGCCAGTTCTTCCGCTTCCCTGCCCCACTGCTCCCACACAGGAGGTGCAGGCCCAGCGCTGGCGTAC
CGGACCCAAGTGGACAACTCGCCCACCATCCTGATGCCCTCTGGTCTGCAGGCCCCCCAGCCCCAGGAGCAGAATGGGATTTTAGACTGGCTTAGGAAACTGCGTTTGCACAAGTATTACCCCGTCTT
TAAACAGCTCACCATGGAGAAGTTTCTGAGCCTTACTGAAGAAGATCTGAATAAATTTGAGTCCCTCACCATGGGAGCAAAGAAAAAGCTCAAGACTCAGTTGGAGCTGGAGAAGGAGAAGTCAGAGA
GACGGTGCCTCAACTCCTCAGCCCCATCCTTGGTCACCAGCAGTGGAGTGGCTCGAGTCACCCCCACCAGCCATGTGGGGCCTGTGCAGCCTGGGCGGAGCAGCCACGCTTCAGAGCTGCGGGTGGAG
GTGGAGCCACCGGCTCACCAGCTGCCCCGAGAAGGCAGCTCCTCCGAGTATTCCAGTTCCTCCTCTAGCCCCATGGGTGTGCAGGCTCGAGAGGAGAGCTCGGACAGCGCCGAGGAGAGCGATAGACG
TGTGGACATCCATGTTGAGGGTACTGAGAAGGAGAAGCCCGTGATGCTTCTGGCTCACTTCCCATCCAGCTCAGCAAGACCCACAGCCCAGGTTCTGCCTGTGCAGAACGAGACCGGCTCCAGCCCTG
CGGGCCACCACCCTCTGCCCGCACAGCTCATGCCTGCAGCTCCACACCTGGCGCCTGTCCGCATGCTGAACTCGGTGCACAAGTCAGACAGAGGCAGCACGGACGTGAAGCTCCTCTCGTCTTCTGTC
CACTCCCTTCTGTCTCTGGAGGAGAGGGGAAAGGGACCTGCTCCTAGAAGTGGCACGAAAGTGGACAAGAGTTTCGGCGGGGCTGTGCTGGACACACTGCCCTCAGCAGCACCTCACCCGCCAGTGCA
GGGCCTCTCGGGCCTGGTAGAGAACACCTCTGTGTCACCCAATGTCTCCTTTGGTCCCCGGGCCAAAGTTGTGCATGCAGCCACACTGGACAGGGTGCTGAAGACAGCACAGCAGCCGGCCTTGACTG
TGGAGACCAGCTCAGCCGCCACAGGGACACCGAGCACCGTCCTGCATGTGGCCCGGCCGCCCATCAAGCTGCTGCTGTCGTCTTCTGTTCCTGCTGACACCGCCATCTCTGGGCAGACTTCTTGTCCC
AACAACGGGCAGATCAGCGTGCCCCCTGCAATACTGAACCCCCGGAATGCTCTGTACACAGCCAACACCAAAGTTGCCTTCTCTGCAGTGAGCAGTGTGCCCGTGGGCCCACTGCAGGGCAGCTTCTG
CGCCAATAGCAACACTGCCTCCCCCAGCAGCCACCCCTCCACCTCTTTTGCCAGCATGGCCACTCTACCCAGCTGCCCAGCCCCCAGCTCCAGCCCTGCCCTCTCTTCTGTCCCAGAGAGCAGCTTCT
ACAGTGGCGGTGCTGGCAGCAGCTCCCCAGGAAACATTCCTGCCTCCAGTCAGAGCCACCACCACCACCACCACCATCAGCAGCCCCCCGCACCCCCCCCACCTGGCTGCATTGTCTGCACGTCCTGT
GGGTGCAGCGGCAGCTGTGGCTCCAACGGCCTGACGGTCAGCTACGCCAACTACTTCCAGCACCCATTCTCGGGGCCGTCCATGTTCACCTTCCCTTTCCTGCCCTTCAGTCCCATGTGTGGCAATGG
CTATGTCAGTACCCAGCAGTACGGTGGTGGCTCTGCCTTCCCTGTGGTACACACAGCCTACAATGGCAGTGTGACTCCAGACCCTGTCCTAGGTGGGCAGTCCACGTTCGCAGTGCCACCCATGCAGC
ACTTCATGACGGGGACAGCGGGGGTGCACCAAGCCCAAGGCCTAGTGGGCAGCAGCAATGGCTCCAGTCACAAAAAGAGTGGGAATTTGTCCTGTTACAACTGTGGGGCCACTGGCCACCGTGCACAG
GACTGCAAGCAACCGTCCATGGACTTCAACCGGCAAGAACATTTTATTAAGCCATGAAAAATCACATAGAGAACTGAAGTCAAGTTGCTGTGGAACCATGGAGACCTAAGGAAAACCACATAGAGAGC
GGAAGTCGAGTTGCTGTGGCGCTTAATATTTTTAACCCAAAGGTGCTTTACTTCACTATACTGGATAGAGAATCTAGCGTACAAGTACGTCAAACTCGATTTCATTGCCAAATTCCTAGTTTTGGAGC
TTGATCCAAGGATTGCCTAGTGGACATCGCTTTGGCAGTAACATGGCCGTCATACCATTGCTGCAGCATGAAGACCTGTCTCCTGAAGATCGATGGTCCTTCTAGGCTCACACGTAATTCCAGGGCAG
CTATGCACGACCTGAGTCAAGACTGCAGGTCAGAGTTCTCTCAAGTTCCCCAGTCGGATCCAGGACCCCTTTTTGGGCTAGGAAGAGCCAGCTGGACTTTGCTGTTTCCTAGAGTGGGAGCCTCGTGT
CTGGCTTCTTGAGGATTGCACTACCTGACGAGGGCCTCTGCAGTCTGGGAGGCAGCCTCTGCTGGGACGGGCCATGTAGGAGCTCCATCGGTGGGCATTGGGGTTGGCACCAGCAGGCTGCTCCGCCA
GGTACACCCAGAAACCGATCGCAGGGTGTTCTGTAGACACTTGGAGCAGTTCCAGGTTTTTAATATTTTTTTTCTGTAAACAGATTTACACTATATTAGTAAATAAGACGTAGCTCACTCTCGACAGC
TTCATTCCGAAGGGTCCAAGTCCCAGGGAATCCAGTCACCGAGGCCTGAGACCAGCCCTCCCATTGGAGGCTTTGAGCCTGCTCTCTCCAAACAAGAACCAACTCTCAAGGACATGGGAATGACTCTG
CTTTGTGAGTTGGGTGTGACTGCCGCGCCTCATTCTTCAGGAAGCTAGCAAGCTATGTGTGTCTCAGATGGCTTTCCCAGGACCCCAGCCCCAGAGCTCACTGCTGATGAATTCACACTTGACACAGA
CATCCAGCAGTAATACAGTTCTGTGATTTCATGAACAAAGACTGGAAACTGTCGGCTTCTTTTGTATAGGCTGTGTGTTGATTGTTAATTCCGTTAAAATTGCCTGGAAAACTTCAGTAGAGAGACGC
AAGACTCCTCGAAACCGCTCACCAGTTACCTACCAGACCAGGGGTGGGGGTGGGTCCTCACTCCTCAACAGGGCGTGAACGTTTCAACCCACACAGCGGAGGCATAAGGGACTTAGACCTCCGAGGTT
AAAGGGAATTTTATGCTCAGATAACATTATTTATAATGCTAAAGCCTTCGGTATTAAAAATCGATGGTAAGATCTTGCCAAGGATTTTCCAGCTTCCTATTTACAGAGAAGAAGAATCACAGTACTTA
AACCATTCTTCAGATGGGACAATCACCCTTATGCAGAATTAGTGTAAATCTAAATACCCTAGAACTGGAGGCGTTGTGACATAAGGCTTCATGCTCTCAGATGGGCTTTGTGTCTGTGGAGACCCACG
GAAGGCTTGAGTGGTGTGGATTCTATGCAATGCAGGACCGATAGACCTCTGTTCTGTCCATGGCACACAGTATCCTCTGTTCTGAGGTGATGGTGATGAGGCACTAGGGGATGCTCTGTTGATCTCTC
ACTCAGAAACACTACAAATGTCAACACAAGAACTGACACAACTTTGCCTTAAAGAGCACCAGACTGGGATTGGTCGCATTGTGTTAATAAGGAAGACCTAGAGTGTTCACTGATGTTTACGATTTTAA
TATTTCTGAAGGCCATCACAGTGGCCTGGGTATGTGCTGAAAGCCAAACTTTTAAATTTTTTGGTTTTTTTTAAACAAAGAAATATTTTAAATAAATCCTATTTCAACACAGTTGTTGTTGAAAACTG
TCTCATAACAAAAGAAAAAATCATATTTAAGTTTTCTGTTCTGTGGTCAGTATAGGGAATGCAGTGTCTTACGGCTGTTGATCTGCTGTGGCAATTCCACGTTACCTTGTGGCATTGAGGAGGTGAGC
GAGCTCCAGCACCATTCATTGCAGCTGTCCAGGCAGCAGATGTCTGTGTCTGGAAGCCGCCGGCTGCCTTTGGAAGCGCTTGTGTGGTGTGGCATCTCTGTGAAGCCGGCTGGTGAGGAGGAGCGAGG
AGCGCGTGCAGCCTGGCCAGCAGGCACCTCCTCACCAGACTTCATCGTTACACACCTAACAGACCAGCCCTTTCCTGTCATTTCTCTAAAACTGCTCAGTCAGGTGGCAGTGGTGCCCAGGTGCGACG
GCCCCAGACTCATGTCGGATTCTAGCCCTGTGTTAACATCTCGGGTACAAAGTGGGATATTCAGACAGGAAGGAGGGCACAATGTTGGGACAAAACAGCTATGTGACCTTTTTGTTGTTGTAGCAAAA
TACTCCGTTTTTTACCTTCCTTTCCAGTTTTTATTTCACGGTCAGTAGTGAAAATTGGAAAGTGTTTTAATGCTGAAAACTCCTAACTGCTGAAGGGCACCGGGGGATGGGATCTAGCGCTCGCAGTG
AAGACAAGTTGTTGAGTGTATGTGGCTGGGTATCCGGAAACCAGCGGCAGGCACACTCATCTCTAAAGATGGCAGCAGCTGGCCTGTTACACAGTACTCAGCAGTTCCCGTGTGGGACTCATTAGGCT
TCCAGTCATTTCTGCAGGTCAGCCTCGCTTGTACCACATGCACGTGTGCCATGACAGTCCCGTGAGGACAGCCCAATGGGAATTGGGTCTCACCCTCCTCACTCCGTCCCCGTTTCTCTGCTTCTGGC
ATTTGGTCTGACGAGCTAGTTTTACAGCCGGCTAATGGGTGGCATCACTTGCCGAAGTCTTAAAAGGTTGCAGGGACTTGGTCTATCTGTTCAACCTCATCCCCAAGGAGTCTTGGGGAACTTGAGCA
GGGGGACAGCTGTCCTTTCCAAAGTACAGGTGACTCCTGTAGAGCCAATCAGGTGGCCCAAGAAACCATCAGTCCAGAGATGGGACTGACCGCTGACCCGTCCCAGGGTTTCTCTGAAAAGGCAGGCA
CCTGTAGTCTACACTTGGCAATACTTCAGCAAACCACATACTGTACTGGCAGGGCCAGGGCCAGGGCCAGGGCACTGCGCTGCCACAGGGGGCAGTGGCCCCGCCTCCAGGTCAGTTCTCACACACAC
AGGTGTTGGTACCAGGACTGAAACCTTCAGATTCTATTGGGCATATTTTCTTGTTAGGAATGAAGGACAATTCTCCCATTTTTGAGCCATTCTTTTGTCAATTCTACAAAATTGCATGTAACTTTATA
AATATTTTTAAAAGATATAGTTTTGTAAATATTTAATATTCTGCTAATTTGATTTTGAATTGTAAATGTCAAGTATTGTTTTTGGGGTTTTTATGTTTTATTATACTTTGTTAAAAGGAAAAATTGTA
CATTTTTAGACTGTTTTTATGAGTAAATTTAATGTACGGAAAATAAAAATTTAAAAAAACTCAAAAGTA

hide sequence

RefSeq Acc Id:

XM_039098193 ⟹ XP_038954121

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	66,582,800 - 66,626,617 (-)	NCBI
mRatBN7.2	19	49,674,185 - 49,718,004 (-)	NCBI


Protein RefSeqs	NP_001414235	(Get FASTA)	NCBI Sequence Viewer
	XP_006255794	(Get FASTA)	NCBI Sequence Viewer
	XP_038954121	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL92728	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000064290
	ENSRNOP00000064290.2
	ENSRNOP00000105060

RefSeq Acc Id:

XP_006255794 ⟸ XM_006255732

- Peptide Label:

isoform X1

- Sequence:

show sequence

MVEKRCPLQRDGVYRWFSELPSPQRVEFLCGLLDLCIPLELRFLGSCLEDLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQREAAGVLYRTLTHTDSIIHNYGLQLNEGRT
GDEFLLLFTMASNHPAFSFHQKQVLRQELTQIQSSLNGGGGGGGGGGGGGKSAPGPSGALPTCSACHKMAPRTETPVSSISNSLENALHTSAHSTEEALPKRPLGKHGKVSVEKIDLKGLSHTKSDRG
VECSFEVLWSDSSVTSVTKSSSEVTEFISKLSQLCPEENLDKLIPCLAGPDSFYVERNHVDLEAGLRFLASIPAHTLKHDHVRKFFSASSPSQQLQSPSPGNPSPPKVGAMMGVSGRPVCGVAGIPSS
QSSTQHHLQHSASSSASLPHCSHTGGAGPALAYRTQVDNSPTILMPSGLQAPQPQEQNGILDWLRKLRLHKYYPVFKQLTMEKFLSLTEEDLNKFESLTMGAKKKLKTQLELEKEKSERRCLNSSAPS
LVTSSGVARVTPTSHVGPVQPGRSSHASELRVEVEPPAHQLPREGSSSEYSSSSSSPMGVQAREESSDSAEESDRRVDIHVEGTEKEKPVMLLAHFPSSSARPTAQVLPVQNETGSSPAGHHPLPAQL
MPAAPHLAPVRMLNSVHKSDRGSTDVKLLSSSVHSLLSLEERGKGPAPRSGTKVDKSFGGAVLDTLPSAAPHPPVQGLSGLVENTSVSPNVSFGPRAKVVHAATLDRVLKTAQQPALTVETSSAATGT
PSTVLHVARPPIKLLLSSSVPADTAISGQTSCPNNGQISVPPAILNPRNALYTANTKVAFSAVSSVPVGPLQGSFCANSNTASPSSHPSTSFASMATLPSCPAPSSSPALSSVPESSFYSGGAGSSSP
GNIPASSQSHHHHHHHQQPPAPPPPGCIVCTSCGCSGSCGSNGLTVSYANYFQHPFSGPSMFTFPFLPFSPMCGNGYVSTQQYGGGSAFPVVHTAYNGSVTPDPVLGGQSTFAVPPMQHFMTGTAGVH
QAQGLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQPSMDFNRQEHFIKP

hide sequence

Ensembl Acc Id:

ENSRNOP00000064290 ⟸ ENSRNOT00000074448

RefSeq Acc Id:	XP_038954121 ⟸ XM_039098193
- Peptide Label:	isoform X2

RefSeq Acc Id:	NP_001414235 ⟸ NM_001427306
- UniProtKB:	M0R4K3 (UniProtKB/TrEMBL)

Protein Domains

CCHC-type

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R4K3-F1-model_v2	AlphaFold	M0R4K3	1-1087	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-5426	BioCyc
Ensembl Genes	ENSRNOG00000018226	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000074448	ENTREZGENE
	ENSRNOT00000074448.3	UniProtKB/TrEMBL
	ENSRNOT00000153213	ENTREZGENE
Gene3D-CATH	1.10.150.50	UniProtKB/TrEMBL
	3.30.1520.10	UniProtKB/TrEMBL
	Zinc finger, CCHC-type	UniProtKB/TrEMBL
InterPro	PX_dom_sf	UniProtKB/TrEMBL
	SAM/pointed	UniProtKB/TrEMBL
	ZCCH14_SAM	UniProtKB/TrEMBL
	ZCCHC14	UniProtKB/TrEMBL
	Znf_CCHC	UniProtKB/TrEMBL
	Znf_CCHC_sf	UniProtKB/TrEMBL
NCBI Gene	365018	ENTREZGENE
PANTHER	PTHR16195	UniProtKB/TrEMBL
	ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 14	UniProtKB/TrEMBL
Pfam	zf-CCHC	UniProtKB/TrEMBL
PhenoGen	Zcchc14	PhenoGen
PROSITE	ZF_CCHC	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000018226	RatGTEx
SMART	ZnF_C2HC	UniProtKB/TrEMBL
Superfamily-SCOP	64268	UniProtKB/TrEMBL
	SAM_homology	UniProtKB/TrEMBL
	SSF57756	UniProtKB/TrEMBL
UniProt	M0R4K3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-17	Zcchc14	zinc finger CCHC-type containing 14	Zcchc14	zinc finger, CCHC domain containing 14	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Zcchc14	zinc finger, CCHC domain containing 14	Zcchc14_predicted	zinc finger, CCHC domain containing 14 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Zcchc14_predicted	zinc finger, CCHC domain containing 14 (predicted)	RGD1309494_predicted	similar to M-BDG29 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1309494_predicted	similar to M-BDG29 (predicted)	LOC365018_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC365018_predicted	similar to M-BDG29 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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