ZCCHC14 (zinc finger CCHC-type containing 14) - Rat Genome Database

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Gene: ZCCHC14 (zinc finger CCHC-type containing 14) Homo sapiens
Analyze
Symbol: ZCCHC14
Name: zinc finger CCHC-type containing 14
RGD ID: 1349569
HGNC Page HGNC:24134
Description: Predicted to enable nucleic acid binding activity; phosphatidylinositol binding activity; and zinc ion binding activity.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BDG-29; BDG29; MGC126527; MGC14139; zinc finger CCHC domain-containing protein 14; zinc finger, CCHC domain containing 14
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381687,406,248 - 87,493,024 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1687,406,246 - 87,493,024 (-)EnsemblGRCh38hg38GRCh38
GRCh371687,439,854 - 87,526,630 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361685,997,353 - 86,082,961 (-)NCBINCBI36Build 36hg18NCBI36
Build 341685,997,363 - 86,082,966NCBI
Celera1671,736,619 - 71,822,230 (-)NCBICelera
Cytogenetic Map16q24.2NCBI
HuRef1673,182,266 - 73,267,848 (-)NCBIHuRef
CHM1_11688,851,639 - 88,937,191 (-)NCBICHM1_1
T2T-CHM13v2.01693,477,129 - 93,563,941 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZCCHC14Human16Q24.3 Microdeletion Syndrome  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: 16q24.3 microdeletion syndromeClinVar 
ZCCHC14HumanKBG syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: KBG syndromeClinVarPMID:31690835
ZCCHC14Humanpersistent fetal circulation syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Congenital alveolar capillary dysplasiaClinVar 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZCCHC14HumanStroke  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:29531354

1 to 20 of 69 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZCCHC14Human1,2-dichloroethane decreases expressionISOZcchc14 (Mus musculus)6480464ethylene dichloride results in decreased expression of ZCCHC14 mRNACTDPMID:28960355
ZCCHC14Human1,2-dimethylhydrazine increases expressionISOZcchc14 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of ZCCHC14 mRNACTDPMID:22206623
ZCCHC14Human17alpha-ethynylestradiol increases expressionISOZcchc14 (Rattus norvegicus)6480464Ethinyl Estradiol results in increased expression of ZCCHC14 mRNACTDPMID:29097150
ZCCHC14Human17beta-estradiol multiple interactionsEXP 6480464[Progesterone co-treated with Estradiol] results in decreased expression of ZCCHC14 mRNACTDPMID:17404688
ZCCHC14Human17beta-estradiol decreases expressionISOZcchc14 (Mus musculus)6480464Estradiol results in decreased expression of ZCCHC14 mRNACTDPMID:39298647
ZCCHC14Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOZcchc14 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of ZCCHC14 mRNACTDPMID:21570461
ZCCHC14Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOZcchc14 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of ZCCHC14 mRNACTDPMID:33387578
ZCCHC14Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOZcchc14 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of ZCCHC14 mRNACTDPMID:32109520
ZCCHC14Human2-methylcholine affects expressionEXP 6480464beta-methylcholine affects the expression of ZCCHC14 mRNACTDPMID:21179406
ZCCHC14Human4,4'-sulfonyldiphenol decreases expressionISOZcchc14 (Mus musculus)6480464bisphenol S results in decreased expression of ZCCHC14 mRNACTDPMID:39298647
ZCCHC14Human4,4'-sulfonyldiphenol decreases methylationEXP 6480464bisphenol S results in decreased methylation of ZCCHC14 geneCTDPMID:31601247
ZCCHC14Humanacrylamide decreases expressionISOZcchc14 (Rattus norvegicus)6480464Acrylamide results in decreased expression of ZCCHC14 mRNACTDPMID:28959563
ZCCHC14Humanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of ZCCHC14 geneCTDPMID:27153756
ZCCHC14Humanall-trans-retinoic acid increases expressionEXP 6480464Tretinoin results in increased expression of ZCCHC14 mRNACTDPMID:23724009
ZCCHC14Humanall-trans-retinoic acid decreases expressionEXP 6480464Tretinoin results in decreased expression of ZCCHC14 mRNACTDPMID:33167477
ZCCHC14Humanantirheumatic drug decreases expressionEXP 6480464Antirheumatic Agents results in decreased expression of ZCCHC14 mRNACTDPMID:24449571
ZCCHC14Humanarsane affects methylationEXP 6480464Arsenic affects the methylation of ZCCHC14 geneCTDPMID:25304211
ZCCHC14Humanarsenic atom affects methylationEXP 6480464Arsenic affects the methylation of ZCCHC14 geneCTDPMID:25304211
ZCCHC14Humanarsenite(3-) multiple interactionsEXP 6480464arsenite inhibits the reaction [G3BP1 protein binds to ZCCHC14 mRNA]CTDPMID:32406909
ZCCHC14Humanbenzene increases expressionEXP 6480464Benzene results in increased expression of ZCCHC14 mRNACTDPMID:19162166

1 to 20 of 69 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZCCHC14Humanmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
ZCCHC14Humannucleic acid binding enablesIEAInterPro:IPR001878 and InterPro:IPR036875150520179 InterProGO_REF:0000002
ZCCHC14Humanphosphatidylinositol binding enablesIEAInterPro:IPR036871150520179 InterProGO_REF:0000002
ZCCHC14Humanprotein binding enablesIPIUniProtKB:A8MQ03 more ...150520179 PMID:32296183IntActPMID:32296183
ZCCHC14Humanzinc ion binding enablesIEAInterPro:IPR001878 and InterPro:IPR036875150520179 InterProGO_REF:0000002
ZCCHC14Humanzinc ion binding enablesIEAUniProtKB-KW:KW-0863150520179 UniProtGO_REF:0000043


#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:9628581   PMID:12168954   PMID:15146197   PMID:16189514   PMID:16344560   PMID:19322201   PMID:19460752   PMID:21988832   PMID:22472876   PMID:23824909   PMID:26186194   PMID:26496610  
PMID:26972000   PMID:27609421   PMID:27997041   PMID:28700943   PMID:29395067   PMID:29507755   PMID:30404004   PMID:31646585   PMID:31801065   PMID:32296183   PMID:32451488   PMID:33345444  
PMID:33961781   PMID:34079125   PMID:34373451   PMID:34535262   PMID:34672954   PMID:35748872   PMID:35867748   PMID:36804426   PMID:36931259   PMID:38334954   PMID:38501662   PMID:38803224  
PMID:39098523  



ZCCHC14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381687,406,248 - 87,493,024 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1687,406,246 - 87,493,024 (-)EnsemblGRCh38hg38GRCh38
GRCh371687,439,854 - 87,526,630 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361685,997,353 - 86,082,961 (-)NCBINCBI36Build 36hg18NCBI36
Build 341685,997,363 - 86,082,966NCBI
Celera1671,736,619 - 71,822,230 (-)NCBICelera
Cytogenetic Map16q24.2NCBI
HuRef1673,182,266 - 73,267,848 (-)NCBIHuRef
CHM1_11688,851,639 - 88,937,191 (-)NCBICHM1_1
T2T-CHM13v2.01693,477,129 - 93,563,941 (-)NCBIT2T-CHM13v2.0
Zcchc14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398122,325,442 - 122,379,662 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8122,325,442 - 122,379,640 (-)EnsemblGRCm39 Ensembl
GRCm388121,598,697 - 121,652,791 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8121,598,703 - 121,652,901 (-)EnsemblGRCm38mm10GRCm38
MGSCv378124,122,603 - 124,175,833 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368124,485,528 - 124,538,023 (-)NCBIMGSCv36mm8
Celera8125,820,046 - 125,873,474 (-)NCBICelera
Cytogenetic Map8E1NCBI
cM Map870.67NCBI
Zcchc14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81966,582,800 - 66,627,136 (-)NCBIGRCr8
mRatBN7.21949,674,185 - 49,718,004 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1949,674,195 - 49,718,029 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01953,644,500 - 53,688,624 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1953,647,815 - 53,688,597 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01964,381,938 - 64,426,070 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41951,858,907 - 51,899,663 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11951,863,747 - 51,904,544 (-)NCBI
Celera1948,921,002 - 48,964,690 (-)NCBICelera
Cytogenetic Map19q12NCBI
Zcchc14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555411,872,624 - 1,909,779 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555411,872,624 - 1,909,723 (-)NCBIChiLan1.0ChiLan1.0
ZCCHC14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21897,165,154 - 97,251,845 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan116103,079,289 - 103,168,696 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01668,078,237 - 68,165,406 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11687,401,184 - 87,486,124 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1687,401,184 - 87,486,124 (-)Ensemblpanpan1.1panPan2
ZCCHC14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1565,611,032 - 65,667,162 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl565,611,026 - 65,664,923 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha565,622,560 - 65,679,884 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0565,832,428 - 65,889,740 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl565,830,308 - 65,887,136 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1565,857,317 - 65,914,597 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0565,689,172 - 65,746,484 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0566,103,133 - 66,160,629 (+)NCBIUU_Cfam_GSD_1.0
Zcchc14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934925,975,048 - 26,030,891 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366411,728,592 - 1,781,896 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366411,728,596 - 1,783,710 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZCCHC14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl61,850,051 - 1,918,704 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.161,849,974 - 1,917,601 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.261,937,818 - 2,005,535 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZCCHC14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1572,776,249 - 72,863,957 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl572,780,300 - 72,863,860 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660472,832,207 - 2,920,201 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zcchc14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247463,097,565 - 3,138,799 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247463,096,644 - 3,138,825 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in ZCCHC14
112 total Variants

1 to 10 of 179 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 16q23.1-24.3(chr16:78816291-90081985)x3 copy number gain See cases [RCV000050840] Chr16:78816291..90081985 [GRCh38]
Chr16:78850188..90148393 [GRCh37]
Chr16:77407689..88675894 [NCBI36]
Chr16:16q23.1-24.3
pathogenic
GRCh38/hg38 16q22.1-24.3(chr16:70514631-90081985)x3 copy number gain See cases [RCV000052422] Chr16:70514631..90081985 [GRCh38]
Chr16:70548534..90148393 [GRCh37]
Chr16:69106035..88675894 [NCBI36]
Chr16:16q22.1-24.3
pathogenic
GRCh38/hg38 16q21-24.3(chr16:65313395-90081985)x3 copy number gain See cases [RCV000052421] Chr16:65313395..90081985 [GRCh38]
Chr16:65347298..90148393 [GRCh37]
Chr16:63904799..88675894 [NCBI36]
Chr16:16q21-24.3
pathogenic
GRCh38/hg38 16q23.1-24.3(chr16:76873569-90081985)x3 copy number gain See cases [RCV000052423] Chr16:76873569..90081985 [GRCh38]
Chr16:76907466..90148393 [GRCh37]
Chr16:75464967..88675894 [NCBI36]
Chr16:16q23.1-24.3
pathogenic
GRCh38/hg38 16q23.3-24.3(chr16:82173150-90081985)x3 copy number gain See cases [RCV000052424] Chr16:82173150..90081985 [GRCh38]
Chr16:82206755..90148393 [GRCh37]
Chr16:80764256..88675894 [NCBI36]
Chr16:16q23.3-24.3
pathogenic
GRCh38/hg38 16q24.1-24.3(chr16:84707538-90081985)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052425]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052425]|See cases [RCV000052425] Chr16:84707538..90081985 [GRCh38]
Chr16:84741144..90148393 [GRCh37]
Chr16:83298645..88675894 [NCBI36]
Chr16:16q24.1-24.3
pathogenic
GRCh38/hg38 16q23.1-24.2(chr16:78704275-87819342)x1 copy number loss See cases [RCV000053359] Chr16:78704275..87819342 [GRCh38]
Chr16:78738172..87852948 [GRCh37]
Chr16:77295673..86410449 [NCBI36]
Chr16:16q23.1-24.2
pathogenic
GRCh38/hg38 16q24.2-24.3(chr16:87306529-89269079)x1 copy number loss See cases [RCV000053362] Chr16:87306529..89269079 [GRCh38]
Chr16:87340135..89335487 [GRCh37]
Chr16:85897636..87862988 [NCBI36]
Chr16:16q24.2-24.3
pathogenic
NM_015144.2(ZCCHC14):c.2817C>T (p.Ala939=) single nucleotide variant Malignant melanoma [RCV000071265] Chr16:87410313 [GRCh38]
Chr16:87443919 [GRCh37]
Chr16:86001420 [NCBI36]
Chr16:16q24.2
not provided
GRCh38/hg38 16q24.1-24.2(chr16:86672163-87766879)x1 copy number loss See cases [RCV000134960] Chr16:86672163..87766879 [GRCh38]
Chr16:86705769..87800485 [GRCh37]
Chr16:85263270..86357986 [NCBI36]
Chr16:16q24.1-24.2
likely pathogenic
1 to 10 of 179 rows

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR142hsa-miR-142-3pTarbaseexternal_infoMicroarrayPOSITIVE

Predicted Target Of
Summary Value
Count of predictions:2912
Count of miRNA genes:977
Interacting mature miRNAs:1173
Transcripts:ENST00000268616, ENST00000561928, ENST00000565193, ENST00000568020
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 33 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597432668GWAS1528742_Hprotein measurement QTL GWAS1528742 (human)3e-11protein measurement168741175787411758Human
597335449GWAS1431523_Hsmoking initiation QTL GWAS1431523 (human)3e-18smoking initiation168741064787410648Human
597234641GWAS1330715_Hanxiety measurement QTL GWAS1330715 (human)3e-14anxiety measurement168741108887411089Human
597245776GWAS1341850_Hcoffee consumption measurement, neuroticism measurement QTL GWAS1341850 (human)4e-10coffee consumption measurement, neuroticism measurement168741012887410129Human
597052380GWAS1148454_Hsmoking status measurement QTL GWAS1148454 (human)6e-08smoking status measurement168741012887410129Human
597108829GWAS1204903_Hself reported educational attainment QTL GWAS1204903 (human)1e-12self reported educational attainment168741012887410129Human
597186386GWAS1282460_Hpeak expiratory flow QTL GWAS1282460 (human)2e-08peak expiratory flowmaximum mid-expiratory flow (MMEF) (CMO:0000253)168741244787412448Human
597174100GWAS1270174_Hprotein measurement QTL GWAS1270174 (human)1e-17protein measurement168740728987407290Human
596964056GWAS1083575_Hmajor depressive disorder QTL GWAS1083575 (human)0.000005major depressive disorder168742836387428364Human
597052568GWAS1148642_Hanxiety QTL GWAS1148642 (human)5e-09anxiety168747795587477956Human

1 to 10 of 33 rows
SHGC-79020  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371687,467,565 - 87,467,784UniSTSGRCh37
Build 361686,025,066 - 86,025,285RGDNCBI36
Celera1671,764,361 - 71,764,580RGD
Cytogenetic Map16q24.2UniSTS
HuRef1673,209,967 - 73,210,186UniSTS
TNG Radiation Hybrid Map1639708.0UniSTS
SHGC-61175  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371687,439,985 - 87,440,119UniSTSGRCh37
Build 361685,997,486 - 85,997,620RGDNCBI36
Celera1671,736,752 - 71,736,886RGD
Cytogenetic Map16q24.2UniSTS
HuRef1673,182,399 - 73,182,533UniSTS
GeneMap99-GB4 RH Map16481.86UniSTS
RH48496  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371687,443,211 - 87,443,362UniSTSGRCh37
Build 361686,000,712 - 86,000,863RGDNCBI36
Celera1671,739,978 - 71,740,129RGD
Cytogenetic Map16q24.2UniSTS
HuRef1673,185,625 - 73,185,776UniSTS
GeneMap99-GB4 RH Map16482.07UniSTS
STS-Z40721  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16q24.2UniSTS
Cytogenetic MapXq28UniSTS
GeneMap99-GB4 RH Map6457.04UniSTS
NCBI RH Map61388.6UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2432 2788 2245 4942 1723 2345 4 622 1935 464 2268 7268 6441 52 3708 847 1731 1612 171


1 to 22 of 22 rows
RefSeq Transcripts NM_015144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005255858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011522964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054379872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054379873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008489065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_243401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB011151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB030243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC092720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC105429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK289682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL117532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN352228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB038312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 22 of 22 rows

Ensembl Acc Id: ENST00000268616   ⟹   ENSP00000268616
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,406,246 - 87,491,854 (-)Ensembl
Ensembl Acc Id: ENST00000561928   ⟹   ENSP00000456499
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,411,412 - 87,433,134 (-)Ensembl
Ensembl Acc Id: ENST00000565193
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,415,312 - 87,417,926 (-)Ensembl
Ensembl Acc Id: ENST00000568020   ⟹   ENSP00000455431
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,406,257 - 87,491,859 (-)Ensembl
Ensembl Acc Id: ENST00000671377   ⟹   ENSP00000499622
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,406,248 - 87,493,024 (-)Ensembl
RefSeq Acc Id: NM_015144   ⟹   NP_055959
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,406,248 - 87,493,024 (-)NCBI
GRCh371687,439,852 - 87,525,870 (-)NCBI
Build 361685,997,353 - 86,082,961 (-)NCBI Archive
Celera1671,736,619 - 71,822,230 (-)RGD
HuRef1673,182,266 - 73,267,848 (-)RGD
CHM1_11688,851,639 - 88,937,191 (-)NCBI
T2T-CHM13v2.01693,477,131 - 93,563,941 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005255858   ⟹   XP_005255915
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,411,415 - 87,493,024 (-)NCBI
GRCh371687,439,852 - 87,525,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017023082   ⟹   XP_016878571
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,411,415 - 87,465,448 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054379872   ⟹   XP_054235847
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01693,482,298 - 93,563,941 (-)NCBI
RefSeq Acc Id: XM_054379873   ⟹   XP_054235848
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01693,482,298 - 93,536,716 (-)NCBI
RefSeq Acc Id: XR_008489065
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01693,477,129 - 93,563,941 (-)NCBI
RefSeq Acc Id: XR_243401
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,406,248 - 87,493,024 (-)NCBI
GRCh371687,439,852 - 87,525,870 (-)NCBI
Sequence:
RefSeq Acc Id: NP_055959   ⟸   NM_015144
- UniProtKB: A0A590UJW6 (UniProtKB/TrEMBL),   A0A5F9XIK1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005255915   ⟸   XM_005255858
- Peptide Label: isoform X1
- UniProtKB: A0A5F9XIK1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016878571   ⟸   XM_017023082
- Peptide Label: isoform X2
- UniProtKB: H3BS18 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000268616   ⟸   ENST00000268616
Ensembl Acc Id: ENSP00000456499   ⟸   ENST00000561928
CCHC-type

Name Modeler Protein Id AA Range Protein Structure
AF-Q8WYQ9-F1-model_v2 AlphaFold Q8WYQ9 1-949 view protein structure

RGD ID:6793616
Promoter ID:HG_KWN:24431
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000269107,   UC002FKA.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361686,083,826 - 86,084,326 (-)MPROMDB
RGD ID:7233083
Promoter ID:EPDNEW_H22286
Type:initiation region
Name:ZCCHC14_1
Description:zinc finger CCHC-type containing 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H22287  EPDNEW_H22288  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,491,948 - 87,492,008EPDNEW
RGD ID:7233081
Promoter ID:EPDNEW_H22287
Type:initiation region
Name:ZCCHC14_3
Description:zinc finger CCHC-type containing 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H22286  EPDNEW_H22288  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,492,121 - 87,492,181EPDNEW
RGD ID:7233085
Promoter ID:EPDNEW_H22288
Type:initiation region
Name:ZCCHC14_2
Description:zinc finger CCHC-type containing 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H22287  EPDNEW_H22286  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,492,317 - 87,492,377EPDNEW


1 to 39 of 39 rows
Database
Acc Id
Source(s)
COSMIC ZCCHC14 COSMIC
Ensembl Genes ENSG00000140948 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000268616.9 UniProtKB/Swiss-Prot
  ENST00000561928 ENTREZGENE
  ENST00000671377 ENTREZGENE
Gene3D-CATH 1.10.150.50 UniProtKB/Swiss-Prot
  3.30.1520.10 UniProtKB/Swiss-Prot
  Zinc finger, CCHC-type UniProtKB/Swiss-Prot
GTEx ENSG00000140948 GTEx
HGNC ID HGNC:24134 ENTREZGENE
Human Proteome Map ZCCHC14 Human Proteome Map
InterPro PX_dom_sf UniProtKB/Swiss-Prot
  SAM UniProtKB/Swiss-Prot
  SAM/pointed_sf UniProtKB/Swiss-Prot
  ZCCH14_SAM UniProtKB/Swiss-Prot
  ZCCHC14 UniProtKB/Swiss-Prot
  Znf_CCHC UniProtKB/Swiss-Prot
  Znf_CCHC_sf UniProtKB/Swiss-Prot
KEGG Report hsa:23174 UniProtKB/Swiss-Prot
NCBI Gene 23174 ENTREZGENE
OMIM 620697 OMIM
PANTHER PTHR16195 UniProtKB/Swiss-Prot
  ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 14 UniProtKB/Swiss-Prot
Pfam SAM_1 UniProtKB/Swiss-Prot
  zf-CCHC UniProtKB/Swiss-Prot
PharmGKB PA134895795 PharmGKB
PROSITE ZF_CCHC UniProtKB/Swiss-Prot
SMART ZnF_C2HC UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47769 UniProtKB/Swiss-Prot
  SSF57756 UniProtKB/Swiss-Prot
  SSF64268 UniProtKB/Swiss-Prot
UniProt A0A590UJW6 ENTREZGENE, UniProtKB/TrEMBL
  A0A5F9XIK1 ENTREZGENE, UniProtKB/TrEMBL
  H3BS18 ENTREZGENE, UniProtKB/TrEMBL
  Q8WYQ9 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary D3DUN1 UniProtKB/Swiss-Prot
  O60324 UniProtKB/Swiss-Prot
  Q3MJD8 UniProtKB/Swiss-Prot
  Q9UFP0 UniProtKB/Swiss-Prot
1 to 39 of 39 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-16 ZCCHC14  zinc finger CCHC-type containing 14    zinc finger, CCHC domain containing 14  Symbol and/or name change 5135510 APPROVED