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ONTOLOGY REPORT - ANNOTATIONS


Term:external encapsulating structure organization
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Accession:GO:0045229 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell.
Synonyms:exact_synonym: external encapsulating structure organisation;   external encapsulating structure organization and biogenesis


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basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
G Lamb2 laminin subunit beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
JBrowse link
G Lamb3 laminin subunit beta 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405
JBrowse link
G Ntn4 netrin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390
JBrowse link
G Ntng1 netrin G1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:197,462,785...197,827,681
Ensembl chr 2:197,463,945...197,826,997
JBrowse link
G Ntng2 netrin G2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO MGI:3620600|MGI:3620601|MGI:3620603 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3772552|PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:86,187,366...86,190,692 JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cma1 chymase 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233
JBrowse link
G Ctss cathepsin S involved_in ISO
IEA
(PMID:22952693)
(MGI:5553237|PMID:22952693)
GO_REF:0000107
RGD
Ensembl
PMID:22952693 GO_REF:0000107 MGI:5553237 NCBI chr 2:183,089,192...183,114,483
Ensembl chr 2:183,086,437...183,114,483
JBrowse link
G Hpn hepsin involved_in ISO
IEA
ISS
(PMID:16908524)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16908524 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180364 (MGI:2176684|PMID:11884617)
Ensembl
RGD
PMID:11884617 GO_REF:0000107 MGI:2176684 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cav2 caveolin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180372 (MGI:2176684|PMID:11884617)
Ensembl
RGD
PMID:11884617 GO_REF:0000107 MGI:2176684 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:18160688), (PMID:19949034), (PMID:23065703) RGD PMID:18160688 PMID:19949034 PMID:23065703 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within ISO MGI:1934902 (MGI:5470500|PMID:23217742) RGD PMID:23217742 MGI:5470500 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5766597|PMID:26024086) RGD PMID:26024086 MGI:5766597 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (MGI:5571208|PMID:24681597) RGD PMID:24681597 MGI:5571208 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4950310|PMID:21350012)
UniProt
RGD
PMID:21350012 GO_REF:0000024 MGI:4950310 NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO MGI:2384087 (MGI:1313058|PMID:9811848) RGD PMID:9811848 MGI:1313058 NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
JBrowse link
G Gas2 growth arrest-specific 2 acts_upstream_of_or_within ISO MGI:6187669 (MGI:6102554|PMID:27734842) RGD PMID:27734842 MGI:6102554 NCBI chr 1:101,452,361...101,582,619
Ensembl chr 1:101,482,591...101,582,619
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5571208|PMID:24681597)
Ensembl
RGD
PMID:24681597 GO_REF:0000107 MGI:5571208 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO MGI:2387934 (MGI:3822602|PMID:18622425) RGD PMID:18622425 MGI:3822602 NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:3613258|PMID:16436605) RGD PMID:16436605 MGI:3613258 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3608888 (MGI:4849883|PMID:21069829)
Ensembl
RGD
PMID:21069829 GO_REF:0000107 MGI:4849883 NCBI chr 1:195,935,162...195,941,469
Ensembl chr 1:195,935,349...195,941,467
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:2156187 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616
JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2183192 (MGI:3610667|PMID:16186342) RGD PMID:16186342 MGI:3610667 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
cell envelope organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrnr hornerin involved_in ISO (PMID:21282207) RGD PMID:21282207
G Tgm3 transglutaminase 3 involved_in ISO (PMID:24643) RGD PMID:24643 NCBI chr 3:117,228,661...117,264,078
Ensembl chr 3:117,228,661...117,264,075
JBrowse link
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856465 (MGI:2664273|PMID:3070812)
Ensembl
RGD
PMID:3070812 GO_REF:0000107 MGI:2664273 NCBI chr 1:132,981,034...133,044,416
Ensembl chr 1:132,981,582...133,043,627
JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO MGI:1347346|MGI:2146046 (MGI:6193362|PMID:29618652) RGD PMID:29618652 MGI:6193362 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 acts_upstream_of_or_within ISO (MGI:2158963|PMID:11741898) RGD PMID:11741898 MGI:2158963 NCBI chr20:29,143,029...29,219,846
Ensembl chr20:29,144,354...29,219,866
JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 acts_upstream_of_or_within ISO MGI:2388161 (MGI:3621082|PMID:16556917) RGD PMID:16556917 MGI:3621082 NCBI chr10:34,920,996...35,126,465
Ensembl chr10:34,921,049...35,123,821
JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:1347346|MGI:2146046 (MGI:6193362|PMID:29618652) RGD PMID:29618652 MGI:6193362 NCBI chr 8:90,704,727...90,744,331
Ensembl chr 8:90,704,727...90,744,328
JBrowse link
G Anxa2 annexin A2 acts_upstream_of_or_within ISO MGI:3028929 (MGI:3027337|PMID:14702107) RGD PMID:14702107 MGI:3027337 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:1856101|MGI:1856102|MGI:3588774 (MGI:3616522|PMID:16338116), (MGI:53875|PMID:4808708), (MGI:54357|PMID:20889), (MGI:83737|PMID:8096378), (MGI:83811|PMID:8895222) RGD PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 MGI:3616522 MGI:53875 MGI:54357 MGI:83737 MGI:83811 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within TAS
ISO
MGI:1856399|MGI:88457 (MGI:2664273|PMID:3070812), (MGI:3694610|PMID:17029294), (MGI:3766851|PMID:17683922), (MGI:5014156|PMID:21467034), (MGI:53676|PMID:4100752), (MGI:53732|PMID:4110409), (MGI:70833|PMID:7859283) RGD PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 More... MGI:2664273 MGI:3694610 MGI:3766851 MGI:5014156 MGI:53676 MGI:53732 MGI:70833, RGD:1300046 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:9188673)
MGI:2154689 (MGI:1350441|PMID:10581026), (MGI:2151300|PMID:11668593)
PMID:21873635
RGD PMID:9188673 PMID:10581026 PMID:11668593 PMID:21873635 MGI:1350441 MGI:2151300, RGD:13792537 NCBI chr20:4,786,929...4,816,598
Ensembl chr20:4,786,929...4,815,985
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032
JBrowse link
G Col14a1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO MGI:3846440 (MGI:5444801|PMID:22906538) RGD PMID:22906538 MGI:5444801 NCBI chr 7:86,722,093...86,937,215
Ensembl chr 7:86,722,094...86,937,214
JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:14976317), (PMID:15095409), (PMID:17211858), (PMID:18375391) RGD PMID:14976317 PMID:15095409 PMID:17211858 PMID:18375391 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in ISO (PMID:17211858), (PMID:18375391) RGD PMID:17211858 PMID:18375391 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:1429602)
MGI:1857275|MGI:2152978 (MGI:1315157|PMID:9832566), (MGI:1327515|PMID:9915573), (MGI:2664273|PMID:3070812), (MGI:3618042|PMID:11171689), (MGI:55057|PMID:7276808), (MGI:77563|PMID:7590256), (MGI:84914|PMID:8989518), (MGI:85592|PMID:9022054)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:1429602 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 More... GO_REF:0000107 MGI:1315157 MGI:1327515 MGI:2664273 MGI:3618042 MGI:55057 MGI:77563 MGI:84914 MGI:85592, RGD:13792537 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within
ISO (PMID:7546986), (PMID:9036918)
MGI:1857431|MGI:1860700 (MGI:5430873|PMID:20587693), (MGI:5605226|PMID:24820199), (MGI:6279612|PMID:29551664), (MGI:6405577|PMID:31655293)
MGI:1857431 (MGI:86656|PMID:9050868)
RGD PMID:7546986 PMID:9036918 PMID:9050868 PMID:20587693 PMID:24820199 More... MGI:5430873 MGI:5605226 MGI:6279612 MGI:6405577 MGI:86656 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Col5a1 collagen type V alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:3664598|MGI:88446 (MGI:3663234|PMID:16492673), (MGI:3664596|PMID:15383546), (MGI:3694610|PMID:17029294), (MGI:5014156|PMID:21467034)
PMID:21873635
(PMID:11278977), (PMID:15095409), (PMID:9683580)
Ensembl
RGD
PMID:9683580 PMID:11278977 PMID:15095409 PMID:15383546 PMID:16492673 More... GO_REF:0000107 MGI:3663234 MGI:3664596 MGI:3694610 MGI:5014156, RGD:13792537 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in ISO (PMID:9425231)
(MGI:3047505|PMID:15199158)
RGD PMID:9425231 PMID:15199158 MGI:3047505 NCBI chr 9:47,448,736...47,598,396
Ensembl chr 9:47,448,736...47,598,154
JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180787|MGI:5550566 (MGI:4412116|PMID:19808781), (MGI:5568656|PMID:24312420), (MGI:5922181|PMID:26746240)
Ensembl
RGD
PMID:19808781 PMID:24312420 PMID:26746240 GO_REF:0000107 MGI:4412116 MGI:5568656 MGI:5922181 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
JBrowse link
G Crtapl1 cartilage associated protein-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:114,047,929...114,067,648
Ensembl chr 8:114,047,933...114,067,631
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5544856|PMID:23979599)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23979599 GO_REF:0000024 GO_REF:0000107 MGI:5544856 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (MGI:5318020|PMID:19900459) RGD PMID:19900459 MGI:5318020 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Dpt dermatopontin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2387341 (MGI:2386368|PMID:12230512), (MGI:3655897|PMID:16877395)
RGD PMID:12230512 PMID:16877395 PMID:21873635 MGI:2386368 MGI:3655897, RGD:13792537 NCBI chr13:77,122,926...77,151,646
Ensembl chr13:77,123,115...77,151,639
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:6406768|PMID:19850926) RGD PMID:19850926 MGI:6406768 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO MGI:5432211 (MGI:5585367|PMID:24777781), (MGI:6114458|PMID:28206698) RGD PMID:24777781 PMID:28206698 MGI:5585367 MGI:6114458 NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
JBrowse link
G Fmod fibromodulin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:45,493,517...45,504,134
Ensembl chr13:45,493,517...45,504,133
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705 (MGI:1355577|PMID:10767326) RGD PMID:10767326 MGI:1355577 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (MGI:1355577|PMID:10767326) RGD PMID:10767326 MGI:1355577 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (MGI:1353150|PMID:10660670) RGD PMID:10660670 MGI:1353150 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IMP
MGI:3610732 (MGI:3604822|PMID:16192629), (MGI:5766417|PMID:26700732)
PMID:21873635
RGD PMID:16192629 PMID:26700732 PMID:16804742 PMID:21873635 PMID:16432278 MGI:3604822 MGI:5766417, RGD:1600668, RGD:13792537, RGD:1600669 NCBI chr18:45,964,311...46,041,477
Ensembl chr18:45,967,343...46,041,477
JBrowse link
G Loxl1 lysyl oxidase-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,692,592...58,716,356
Ensembl chr 8:58,692,593...58,716,356
JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(PMID:21835952)
PMID:21873635
UniProt
Ensembl
RGD
PMID:21835952 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
JBrowse link
G Loxl4 lysyl oxidase-like 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:241,396,183...241,416,385
Ensembl chr 1:241,397,983...241,416,322
JBrowse link
G Lum lumican involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:32,358,990...32,365,794
Ensembl chr 7:32,358,614...32,365,793
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO MGI:5007248 (MGI:5008683|PMID:21606205) RGD PMID:21606205 MGI:5008683 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
JBrowse link
G Mkx mohawk homeobox acts_upstream_of_or_within ISO MGI:5287572 (MGI:5287220|PMID:20696843) RGD PMID:20696843 MGI:5287220 NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO MGI:2387934 (MGI:3822602|PMID:18622425) RGD PMID:18622425 MGI:3822602 NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1857444 (MGI:1339276|PMID:10383727)
GO_REF:0000107
HGNC-UCL
RGD
Ensembl
PMID:10383727 GO_REF:0000024 GO_REF:0000107 MGI:1339276 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Optc opticin involved_in ISO
IBA
(MGI:6148629|PMID:29323130)
PMID:21873635
RGD PMID:29323130 PMID:21873635 MGI:6148629, RGD:13792537 NCBI chr13:45,353,954...45,368,254
Ensembl chr13:45,355,148...45,365,237
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within ISO MGI:4830452 (MGI:4830073|PMID:20363744) RGD PMID:20363744 MGI:4830073 NCBI chr 5:132,841,868...132,856,664
Ensembl chr 5:132,841,928...132,856,659
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5779580|PMID:27119146)
GO_REF:0000024
RGD
UniProt
PMID:27119146 PMID:21873635 GO_REF:0000024 MGI:5779580, RGD:13792537 NCBI chr10:85,338,158...85,345,108
Ensembl chr10:85,338,161...85,345,093
JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within ISO MGI:3706369 (MGI:3706231|PMID:17135260) RGD PMID:17135260 MGI:3706231 NCBI chr20:27,302,046...27,352,098
Ensembl chr20:27,302,141...27,352,786
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO MGI:3620600|MGI:3620603 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
JBrowse link
G Pxdn peroxidasin involved_in ISO (PMID:22842973) RGD PMID:22842973 NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:4413438|PMID:18802027) RGD PMID:18802027 MGI:4413438 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO (MGI:5306295|PMID:17958745) RGD PMID:17958745 MGI:5306295 NCBI chr10:60,272,400...60,280,506
Ensembl chr10:60,272,400...60,281,243
JBrowse link
G Serpinh1 serpin family H member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:2176070|MGI:2385994|MGI:5505265 (MGI:1890100|PMID:10995453), (MGI:5494537|PMID:22492985)
GO_REF:0000107
RGD
Ensembl
PMID:10995453 PMID:22492985 PMID:21873635 GO_REF:0000107 MGI:1890100 MGI:5494537, RGD:13792537 NCBI chr 1:153,643,500...153,650,853
Ensembl chr 1:153,643,510...153,650,801
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:3664776 (MGI:3839034|PMID:19079247) RGD PMID:19079247 MGI:3839034 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16891397)
AgBase
RGD
PMID:16891397 GO_REF:0000024 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:2388050 (MGI:3588906|PMID:15993878) RGD PMID:15993878 MGI:3588906 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO MGI:2181283|MGI:3053791 (MGI:2177884|PMID:11925569), (MGI:3052887|PMID:15194424) RGD PMID:11925569 PMID:15194424 MGI:2177884 MGI:3052887
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3699244|MGI:5816979 (MGI:5804716|PMID:27435297)
Ensembl
RGD
PMID:27435297 GO_REF:0000107 MGI:5804716 NCBI chr 6:106,888,284...106,913,139
Ensembl chr 6:106,888,284...106,913,117
JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated acts_upstream_of_or_within ISO MGI:3699244|MGI:5770088 (MGI:5804716|PMID:27435297) RGD PMID:27435297 MGI:5804716 NCBI chr 1:134,223,967...134,247,232
Ensembl chr 1:134,223,949...134,246,970
JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:3588774 (MGI:3616522|PMID:16338116), (MGI:54141|PMID:937819), (MGI:54357|PMID:20889), (MGI:63907|PMID:3385878) RGD PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 MGI:3616522 MGI:54141 MGI:54357 MGI:63907 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1860700 (MGI:5605226|PMID:24820199) RGD PMID:24820199 MGI:5605226 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in
acts_upstream_of_or_within
ISO (PMID:18973305), (PMID:27339457)
MGI:4410301 (MGI:4397710|PMID:19855011)
(MGI:3619755|PMID:16478991), (MGI:4947512|PMID:20019329), (MGI:5660411|PMID:26178373), (MGI:6140729|PMID:28508064), (MGI:6158865|PMID:26711913)
RGD PMID:16478991 PMID:18973305 PMID:19855011 PMID:20019329 PMID:26178373 More... MGI:3619755 MGI:4397710 MGI:4947512 MGI:5660411 MGI:6140729 MGI:6158865 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
G Eln elastin TAS RGD PMID:10090127 RGD:731206 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (MGI:5605894|PMID:25056700) RGD PMID:25056700 MGI:5605894 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Fbln5 fibulin 5 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:2681470|PMID:11805835), (MGI:2681471|PMID:11805834)
(PMID:17035250)
PMID:21873635
UniProt
RGD
PMID:11805834 PMID:11805835 PMID:17035250 PMID:21873635 GO_REF:0000024 MGI:2681470 MGI:2681471, RGD:13792537 NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within IMP
ISO
MGI:3610732 (MGI:3604822|PMID:16192629), (MGI:3609311|PMID:12417550), (MGI:5616293|PMID:23413430) RGD PMID:12417550 PMID:16192629 PMID:23413430 PMID:16432278 MGI:3604822 MGI:3609311 MGI:5616293, RGD:1600669 NCBI chr18:45,964,311...46,041,477
Ensembl chr18:45,967,343...46,041,477
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 involved_in ISO (MGI:5638486|PMID:25713297) RGD PMID:25713297 MGI:5638486 NCBI chr 1:82,600,136...82,634,346
Ensembl chr 1:82,600,136...82,632,178
JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO
IBA
(PMID:22355679)
PMID:21873635
RGD PMID:22355679 PMID:21873635 RGD:13792537 NCBI chr10:46,167,158...46,170,176
Ensembl chr10:46,167,217...46,170,155
JBrowse link
G Myh11 myosin heavy chain 11 involved_in ISO
IEA
(PMID:16444274)
GO_REF:0000107
RGD
Ensembl
PMID:16444274 GO_REF:0000107 NCBI chr10:743,364...838,459
Ensembl chr10:743,685...838,459
JBrowse link
G Thsd4 thrombospondin type 1 domain containing 4 acts_upstream_of_or_within ISO (MGI:4453293|PMID:19940141) RGD PMID:19940141 MGI:4453293 NCBI chr 8:60,384,636...60,984,419 JBrowse link
G Tnxb tenascin XB involved_in ISO (PMID:15102077) RGD PMID:15102077
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a2 collagen type I alpha 2 chain acts_upstream_of_or_within ISO MGI:1856327 (MGI:5468210|PMID:22910579) RGD PMID:22910579 MGI:5468210 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO (MGI:6094666|PMID:28774593) RGD PMID:28774593 MGI:6094666 NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
JBrowse link
G Gas6 growth arrest specific 6 involved_in IEP PMID:18374201 UniProt PMID:18374201 RGD:8554638 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
JBrowse link
G Gpm6b glycoprotein m6b involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21638316)
Ensembl
UniProt
RGD
PMID:21638316 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:28,057,788...28,204,409
Ensembl chr  X:28,059,450...28,204,211
JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4437572 (MGI:4437139|PMID:20181608)
Ensembl
RGD
PMID:20181608 GO_REF:0000107 MGI:4437139 NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
JBrowse link
G Has1 hyaluronan synthase 1 involved_in IBA
ISO
PMID:21873635
(MGI:5508296|PMID:10455188)
RGD PMID:10455188 PMID:21873635 MGI:5508296, RGD:13792537 NCBI chr 1:58,693,411...58,705,653
Ensembl chr 1:58,693,411...58,705,397
JBrowse link
G Has2 hyaluronan synthase 2 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5508296|PMID:10455188)
GO_REF:0000024
RGD
UniProt
PMID:10455188 PMID:21873635 GO_REF:0000024 MGI:5508296, RGD:13792537 NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
JBrowse link
G Has3 hyaluronan synthase 3 involved_in IBA
ISO
PMID:21873635
(MGI:5508296|PMID:10455188)
RGD PMID:10455188 PMID:21873635 MGI:5508296, RGD:13792537 NCBI chr19:34,768,421...34,782,170
Ensembl chr19:34,771,982...34,782,592
JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:23867277) RGD PMID:23867277 NCBI chr13:67,949,780...67,987,434
Ensembl chr13:67,949,780...67,987,459
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:5468210|PMID:22910579)
Ensembl
RGD
PMID:22910579 GO_REF:0000107 MGI:5468210 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4820704|PMID:19734317)
(PMID:19734317)
UniProt
RGD
PMID:19734317 GO_REF:0000024 MGI:4820704 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 IMP positive regulation RGD PMID:18613219 RGD:2314619 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4438316|PMID:19767743)
UniProt
RGD
PMID:19767743 GO_REF:0000024 MGI:4438316 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
JBrowse link
G Eng endoglin IMP RGD PMID:15539634 RGD:1601032 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (MGI:6141091|PMID:27188440) RGD PMID:27188440 MGI:6141091 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in ISO (MGI:6508502|PMID:23233679) RGD PMID:23233679 MGI:6508502 NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in ISO (MGI:6508502|PMID:23233679) RGD PMID:23233679 MGI:6508502 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
JBrowse link
G Capg capping actin protein, gelsolin like NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 4:104,594,743...104,611,856
Ensembl chr 4:104,594,753...104,611,856
JBrowse link
G Cma1 chymase 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233
JBrowse link
G Eng endoglin involved_in ISO (PMID:18223685) RGD PMID:18223685 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Exoc8 exocyst complex component 8 involved_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr19:52,855,010...52,857,499
Ensembl chr19:52,852,578...52,857,491
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:21119006) RGD PMID:21119006 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Gsn gelsolin NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Kif9 kinesin family member 9 involved_in ISO (PMID:21119006) RGD PMID:21119006 NCBI chr 8:110,459,467...110,504,492
Ensembl chr 8:110,459,383...110,505,252
JBrowse link
G Klk4 kallikrein-related peptidase 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4355346 (MGI:5502300|PMID:22243248)
RGD PMID:22243248 PMID:21873635 MGI:5502300, RGD:13792537 NCBI chr 1:94,344,608...94,348,979
Ensembl chr 1:94,344,195...94,349,424
JBrowse link
G Klk5 kallikrein related-peptidase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:94,296,574...94,304,768
Ensembl chr 1:94,296,168...94,304,666
JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO (PMID:15159456) RGD PMID:15159456 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr15:50,443,300...50,544,682
Ensembl chr15:50,488,149...50,544,680
JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3771509|PMID:17987127)
(PMID:8576151), (PMID:9065415)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8576151 PMID:9065415 PMID:17987127 GO_REF:0000024 GO_REF:0000107 MGI:3771509 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
JBrowse link
G Mmp20 matrix metallopeptidase 20 acts_upstream_of_or_within ISO MGI:2447874 (MGI:5502300|PMID:22243248) RGD PMID:22243248 MGI:5502300 NCBI chr 8:4,789,415...4,830,035
Ensembl chr 8:4,789,415...4,830,035
JBrowse link
G Noxo1 NADPH oxidase organizer 1 involved_in ISO (PMID:19755710) RGD PMID:19755710 NCBI chr10:13,721,473...13,726,061
Ensembl chr10:13,721,473...13,726,061
JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 acts_upstream_of_or_within ISO MGI:3665440|MGI:6363079 (MGI:6277636|PMID:30659184) RGD PMID:30659184 MGI:6277636 NCBI chr 2:174,856,339...174,868,922
Ensembl chr 2:174,856,397...174,868,919
JBrowse link
G Plg plasminogen involved_in ISO (PMID:14699093) RGD PMID:14699093 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (PMID:19755710) RGD PMID:19755710 NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
JBrowse link
G Tpsab1 tryptase alpha/beta 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr10:14,360,396...14,362,811
Ensembl chr10:14,360,396...14,362,811
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO MGI:5913851 (MGI:5906533|PMID:26247047) RGD PMID:26247047 MGI:5906533 NCBI chr 8:74,838,338...75,020,938
Ensembl chr 8:74,838,318...75,018,229
JBrowse link
extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07049085.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:99,964,486...100,918,384 JBrowse link
G AABR07060833.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:94,944,360...94,981,873 JBrowse link
G AABR07069011.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Abi3bp ABI family member 3 binding protein acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
JBrowse link
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:14,331,659...14,361,620
Ensembl chr 7:14,331,745...14,361,620
JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:10,299,264...10,338,464
Ensembl chr 3:10,300,028...10,346,687
JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:29,143,029...29,219,846
Ensembl chr20:29,144,354...29,219,866
JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249
JBrowse link
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:32,430,436...32,562,481
Ensembl chr 1:32,430,436...32,560,494
JBrowse link
G Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:120,445,800...120,768,204
Ensembl chr 1:120,445,749...120,768,202
JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:41,686,951...41,840,035
Ensembl chr19:41,688,617...41,839,781
JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:34,920,996...35,126,465
Ensembl chr10:34,921,049...35,123,821
JBrowse link
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3778519|PMID:18454205)
PMID:21873635
RGD PMID:18454205 PMID:21873635 MGI:3778519, RGD:13792537 NCBI chr 7:125,396,227...125,528,020
Ensembl chr 7:125,397,734...125,527,777
JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1, motif 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:18,231,051...18,437,773
Ensembl chr14:18,231,165...18,435,556
JBrowse link
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:83,670,556...83,680,045
Ensembl chr13:83,670,183...83,680,065
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
JBrowse link
G Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:35,421,483...35,633,305
Ensembl chr 2:35,421,510...35,633,298
JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:90,704,727...90,744,331
Ensembl chr 8:90,704,727...90,744,328
JBrowse link
G Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:29,349,078...29,368,413
Ensembl chr 8:29,349,114...29,368,404
JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 involved_in ISO
IBA
(MGI:4452308|PMID:20096780)
PMID:21873635
RGD PMID:20096780 PMID:21873635 MGI:4452308, RGD:13792537 NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
JBrowse link
G Adamtsl2 ADAMTS-like 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5638958|PMID:25762570)
PMID:21873635
RGD PMID:25762570 PMID:21873635 MGI:5638958, RGD:13792537 NCBI chr 3:10,397,774...10,434,557
Ensembl chr 3:10,404,626...10,434,554
JBrowse link
G Adamtsl3 ADAMTS-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:136,288,793...136,596,986
Ensembl chr 1:136,288,793...136,596,986
JBrowse link
G Adamtsl4 ADAMTS-like 4 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:183,235,634...183,247,091
Ensembl chr 2:183,235,646...183,246,848
JBrowse link
G Adamtsl5 ADAMTS-like 5 NOT|involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,362,623...9,371,248
Ensembl chr 7:9,363,237...9,370,285
JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2136636 (MGI:2385816|PMID:9734405) RGD PMID:9734405 MGI:2385816 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO MGI:108405 (MGI:3614238|PMID:16407979) RGD PMID:16407979 MGI:3614238 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 acts_upstream_of_or_within ISO MGI:107765 (MGI:3614238|PMID:16407979) RGD PMID:16407979 MGI:3614238 NCBI chr14:41,557,918...41,878,622 JBrowse link
G Aplp1 amyloid beta precursor like protein 1 acts_upstream_of_or_within ISO MGI:88047|MGI:88059 (MGI:3056838|PMID:15385965) RGD PMID:15385965 MGI:3056838 NCBI chr 1:85,696,880...85,707,215
Ensembl chr 1:85,696,882...85,707,155
JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO MGI:88046|MGI:88059 (MGI:3056838|PMID:15385965) RGD PMID:15385965 MGI:3056838 NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855
JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:88046|MGI:88047 (MGI:3056838|PMID:15385965)
UniProt
RGD
PMID:15385965 GO_REF:0000024 MGI:3056838 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097 (MGI:53994|PMID:1115218) RGD PMID:1115218 MGI:53994 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Atxn1l ataxin 1-like acts_upstream_of_or_within ISO MGI:5301616 (MGI:5298126|PMID:22014525) RGD PMID:22014525 MGI:5298126
G B4galt1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388614 (MGI:84206|PMID:8787759)
MGI:2178779 (MGI:2178150|PMID:11900463)
Ensembl
RGD
PMID:8787759 PMID:11900463 GO_REF:0000107 MGI:2178150 MGI:84206 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:2158443 (MGI:3655550|PMID:10586052) RGD PMID:10586052 MGI:3655550 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
JBrowse link
G Ccdc80 coiled-coil domain containing 80 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137
JBrowse link
G Ccn1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Col10a1 collagen type X alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494
JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,786,929...4,816,598
Ensembl chr20:4,786,929...4,815,985
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032
JBrowse link
G Col15a1 collagen type XV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
JBrowse link
G Col17a1 collagen type XVII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:246,530,589...246,577,632
Ensembl chr 1:246,531,367...246,577,632
JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2179134 (MGI:3054601|PMID:15254016)
RGD PMID:15254016 PMID:21873635 MGI:3054601, RGD:13792537 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
JBrowse link
G Col19a1 collagen type XIX alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3053870 (MGI:3053247|PMID:15302855)
RGD PMID:15302855 PMID:21873635 MGI:3053247, RGD:13792537 NCBI chr 9:26,673,916...27,022,139
Ensembl chr 9:26,675,391...27,022,106
JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
JBrowse link
G Col22a1 collagen type XXII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462
JBrowse link
G Col23a1 collagen type XXIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:35,549,090...35,839,152
Ensembl chr10:35,549,113...35,836,314
JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441
JBrowse link
G Col25a1 collagen type XXV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:218,755,152...219,154,348
Ensembl chr 2:218,755,691...219,153,501
JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5315593 (MGI:5315238|PMID:22206015)
RGD PMID:22206015 PMID:21873635 MGI:5315238, RGD:13792537 NCBI chr 5:76,647,302...76,765,987
Ensembl chr 5:76,647,429...76,765,174
JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in IBA
ISO
PMID:21873635
MGI:1857431|MGI:1860700 (MGI:5604911|PMID:25330296), (MGI:6405577|PMID:31655293)
RGD PMID:25330296 PMID:31655293 PMID:21873635 MGI:5604911 MGI:6405577, RGD:13792537 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
JBrowse link
G Col4a2 collagen type IV alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839
JBrowse link
G Col4a3 collagen type IV alpha 3 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:83,875,958...84,004,955
Ensembl chr 9:83,875,561...84,001,895
JBrowse link
G Col4a4 collagen type IV alpha 4 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876
JBrowse link
G Col4a5 collagen type IV alpha 5 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:105,118,762...105,322,699
Ensembl chr  X:105,118,820...105,322,692
JBrowse link
G Col4a6 collagen type IV alpha 6 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2148900|PMID:10965041)
RGD PMID:10965041 PMID:21873635 MGI:2148900, RGD:13792537 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500
JBrowse link
G Col5a1 collagen type V alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:47,448,736...47,598,396
Ensembl chr 9:47,448,736...47,598,154
JBrowse link
G Col5a3 collagen type V alpha 3 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853
JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
JBrowse link
G Col8a1 collagen type VIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424
JBrowse link
G Col8a2 collagen type VIII alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:138,586,201...138,613,627
Ensembl chr 5:138,585,999...138,612,850
JBrowse link
G Col9a1 collagen type IX alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:26,585,034...26,668,222
Ensembl chr 9:26,585,034...26,668,213
JBrowse link
G Col9a2 collagen type IX alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:134,607,616...134,624,678
Ensembl chr 5:134,607,616...134,624,677
JBrowse link
G Col9a3 collagen type IX alpha 3 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,711,776...167,734,468
Ensembl chr 3:167,711,840...167,734,465
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107
JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr19:48,053,153...48,111,485
Ensembl chr19:48,053,287...48,110,465
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO MGI:4947395 (MGI:4946456|PMID:21148564) RGD PMID:21148564 MGI:4946456 NCBI chr16:20,995,210...21,330,586
Ensembl chr16:21,235,784...21,330,319
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (MGI:5294250|PMID:21972064) RGD PMID:21972064 MGI:5294250 NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659
JBrowse link
G Ecm2 extracellular matrix protein 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3807344|PMID:18757743)
PMID:21873635
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr17:15,120,194...15,152,536
Ensembl chr17:15,120,196...15,152,516
JBrowse link
G Egfl6 EGF-like-domain, multiple 6 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr  X:27,884,087...27,942,044
Ensembl chr  X:27,884,125...27,942,044
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298
JBrowse link
G Elf3 E74 like ETS transcription factor 3 acts_upstream_of_or_within ISO MGI:2662485 (MGI:2179164|PMID:11984530) RGD PMID:11984530 MGI:2179164 NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481
JBrowse link
G Eln elastin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Emilin1 elastin microfibril interfacer 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (MGI:1267106|PMID:9651581) RGD PMID:9651581 MGI:1267106 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO MGI:1859815|MGI:1914725 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478
JBrowse link
G Ero1b endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO MGI:1354385|MGI:1859815 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr17:85,861,086...86,003,244
Ensembl chr17:85,929,618...86,003,398
JBrowse link
G Fbln1 fibulin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075
JBrowse link
G Fbln2 fibulin 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:123,704,289...123,763,857
Ensembl chr 4:123,704,373...123,763,948
JBrowse link
G Fbln5 fibulin 5 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755
JBrowse link
G Fn1 fibronectin 1 IMP RGD PMID:12388756 RGD:1358623 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1347479 (MGI:3617131|PMID:16439479) RGD PMID:16439479 MGI:3617131 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within ISO MGI:1347470|MGI:2667134 (MGI:3617131|PMID:16439479) RGD PMID:16439479 MGI:3617131 NCBI chr17:32,835,730...32,842,555 JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO MGI:2183221 (MGI:3719550|PMID:11487638) RGD PMID:11487638 MGI:3719550 NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
JBrowse link
G Gfod2 glucose-fructose oxidoreductase domain containing 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr19:33,599,689...33,647,060
Ensembl chr19:33,604,187...33,647,004
JBrowse link
G Hpse2 heparanase 2 (inactive) acts_upstream_of_or_within ISO MGI:4308701 (MGI:5621237|PMID:25510506) RGD PMID:25510506 MGI:5621237 NCBI chr 1:241,582,904...242,284,348
Ensembl chr 1:241,583,187...242,246,118
JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 3:79,990,048...80,113,556
Ensembl chr 3:79,990,056...80,113,617
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (MGI:1349497|PMID:10579729) RGD PMID:10579729 MGI:1349497 NCBI chr 5:149,677,437...149,778,594 JBrowse link
G Ibsp integrin-binding sialoprotein involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
(MGI:3807344|PMID:18757743)
PMID:21873635
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18757743 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3807344, RGD:13792537 NCBI chr14:5,439,825...5,452,570
Ensembl chr14:5,439,829...5,452,693
JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO MGI:2176236 (MGI:5632446|PMID:25410057) RGD PMID:25410057 MGI:5632446 NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 acts_upstream_of_or_within ISO MGI:6693683 (MGI:6423642|PMID:32265257) RGD PMID:32265257 MGI:6423642 NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722
JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 acts_upstream_of_or_within ISO MGI:6693686 (MGI:6423642|PMID:32265257) RGD PMID:32265257 MGI:6423642 NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382
JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO MGI:2181699 (MGI:1355040|PMID:10742111) RGD PMID:10742111 MGI:1355040 NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510
JBrowse link
G Itih1 inter-alpha trypsin inhibitor, heavy chain 1 acts_upstream_of_or_within ISO (MGI:3761906|PMID:17675295) RGD PMID:17675295 MGI:3761906 NCBI chr16:6,122,246...6,136,363
Ensembl chr16:6,122,248...6,136,363
JBrowse link
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:243,939,596...243,943,060
Ensembl chr 1:243,939,647...243,943,059
JBrowse link
G Lgals3 galectin 3 acts_upstream_of_or_within ISO MGI:97011 (MGI:3589495|PMID:15800063) RGD PMID:15800063 MGI:3589495 NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025
JBrowse link
G Mia MIA SH3 domain containing involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2159701 (MGI:2158918|PMID:11839810)
RGD PMID:11839810 PMID:21873635 MGI:2158918, RGD:13792537 NCBI chr 1:82,473,677...82,476,378
Ensembl chr 1:82,473,678...82,475,370
JBrowse link
G Mmp10 matrix metallopeptidase 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,689,840...4,697,748
Ensembl chr 8:4,689,840...4,697,748
JBrowse link
G Mmp11 matrix metallopeptidase 11 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2387934 (MGI:3822602|PMID:18622425)
RGD PMID:18622425 PMID:21873635 MGI:3822602, RGD:13792537 NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Mmp15 matrix metallopeptidase 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:9,663,449...9,684,943
Ensembl chr19:9,663,449...9,684,943
JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:31,312,280...31,556,276
Ensembl chr 5:31,312,280...31,548,388
JBrowse link
G Mmp17 matrix metallopeptidase 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:27,074,398...27,099,317
Ensembl chr12:27,074,409...27,099,316
JBrowse link
G Mmp19 matrix metallopeptidase 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:1,221,229...1,229,555
Ensembl chr 7:1,221,343...1,229,555
JBrowse link
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,598,326...4,606,965
Ensembl chr 8:4,598,391...4,606,965
JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Mmp20 matrix metallopeptidase 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,789,415...4,830,035
Ensembl chr 8:4,789,415...4,830,035
JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855
JBrowse link
G Mmp23 matrix metallopeptidase 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:166,239,643...166,242,734
Ensembl chr 5:166,239,644...166,242,433
JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,279,096...144,323,572
Ensembl chr 3:144,279,096...144,323,572
JBrowse link
G Mmp27 matrix metallopeptidase 27 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,745,887...4,755,806
Ensembl chr 8:4,745,883...4,755,806
JBrowse link
G Mmp28 matrix metallopeptidase 28 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,243,748...68,264,728
Ensembl chr10:68,241,138...68,264,866
JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,640,397...4,653,963
Ensembl chr 8:4,640,416...4,653,961
JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902
JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,724,009...4,732,956
Ensembl chr 8:4,724,029...4,733,520
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1932294|MGI:96778 (MGI:3589495|PMID:15800063)
PMID:21873635
Ensembl
RGD
PMID:15800063 PMID:21873635 GO_REF:0000107 MGI:3589495, RGD:13792537 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mpzl3 myelin protein zero-like 3 acts_upstream_of_or_within ISO MGI:1857012 (MGI:3055636|PMID:15482472) RGD PMID:15482472 MGI:3055636 NCBI chr 8:45,360,475...45,380,662
Ensembl chr 8:45,349,054...45,380,662
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857973 (MGI:3624056|PMID:16554364) RGD PMID:16554364 MGI:3624056 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Ndnf neuron-derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 4:94,944,749...94,987,414 JBrowse link
G Nepn nephrocan involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:31,783,526...31,799,458
Ensembl chr20:31,783,526...31,799,446
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857478 (MGI:3655425|PMID:16835260)
HGNC-UCL
RGD
PMID:16835260 GO_REF:0000024 MGI:3655425 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 acts_upstream_of_or_within ISO MGI:2179705 (MGI:3655550|PMID:10586052) RGD PMID:10586052 MGI:3655550 NCBI chr 1:245,164,586...245,173,225
Ensembl chr 1:245,165,950...245,173,213
JBrowse link
G Nid1 nidogen 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr17:86,085,046...86,158,277
Ensembl chr17:86,085,077...86,158,267
JBrowse link
G Nox1 NADPH oxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3616995 (MGI:3615064|PMID:16386251)
Ensembl
RGD
PMID:16386251 GO_REF:0000107 MGI:3615064 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236
JBrowse link
G Nphp3 nephrocystin 3 acts_upstream_of_or_within ISO MGI:1856987 (MGI:71873|PMID:7539536) RGD PMID:7539536 MGI:71873 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176560 (MGI:3615102|PMID:16424942) RGD PMID:16424942 MGI:3615102 NCBI chr20:46,050,134...46,070,569
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Olfml2a olfactomedin-like 2A acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 3:22,688,562...22,717,745
Ensembl chr 3:22,688,598...22,717,909
JBrowse link
G Olfml2b olfactomedin-like 2B acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr13:82,869,414...82,906,607
Ensembl chr13:82,869,433...82,906,607
JBrowse link
G Otol1 otolin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:154,339,612...154,349,050
Ensembl chr 2:154,339,612...154,349,023
JBrowse link
G Papln papilin, proteoglycan-like sulfated glycoprotein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:103,398,166...103,432,199
Ensembl chr 6:103,398,838...103,432,206
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926728 (MGI:3525374|PMID:15543606)
Ensembl
RGD
PMID:15543606 GO_REF:0000107 MGI:3525374 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Pomt1 protein-O-mannosyltransferase 1 acts_upstream_of_or_within ISO MGI:3497739 (MGI:3057057|PMID:15383666) RGD PMID:15383666 MGI:3057057 NCBI chr 3:15,520,717...15,538,579
Ensembl chr 3:15,520,481...15,538,581
JBrowse link
G Postn periostin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3610687|PMID:16314533)
RGD PMID:16314533 PMID:21873635 MGI:3610687, RGD:13792537 NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
JBrowse link
G Prdx4 peroxiredoxin 4 acts_upstream_of_or_within ISO MGI:1354385|MGI:1914725 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr  X:40,026,762...40,044,066
Ensembl chr  X:40,026,651...40,044,066
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:2684666 (MGI:2679914|PMID:14642275) RGD PMID:14642275 MGI:2679914 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (MGI:3761906|PMID:17675295) RGD PMID:17675295 MGI:3761906 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
G Pxdn peroxidasin involved_in ISO (PMID:19590037)
(MGI:3851833|PMID:19590037)
RGD PMID:19590037 MGI:3851833 NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3623517 (MGI:3621661|PMID:11747814)
RGD PMID:11747814 PMID:21873635 MGI:3621661, RGD:13792537 NCBI chr 5:58,102,915...58,169,513
Ensembl chr 5:58,102,981...58,169,502
JBrowse link
G RGD1562885 similar to RIKEN cDNA 2300002M23 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:3,172,330...3,173,886 JBrowse link
G Rxfp1 relaxin family peptide receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3054831 (MGI:3054144|PMID:15256493)
Ensembl
RGD
PMID:15256493 GO_REF:0000107 MGI:3054144 NCBI chr 2:164,772,270...164,893,484
Ensembl chr 2:164,774,799...164,893,412
JBrowse link
G Scara3 scavenger receptor class A, member 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:40,139,873...40,172,866
Ensembl chr15:40,140,161...40,172,894
JBrowse link
G Serac1 serine active site containing 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:46,620,741...46,656,801
Ensembl chr 1:46,620,498...46,656,727
JBrowse link
G Serpinb5 serpin family B member 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3040188 (MGI:3806752|PMID:18593913)
Ensembl
RGD
PMID:18593913 GO_REF:0000107 MGI:3806752 NCBI chr13:22,985,557...23,005,756
Ensembl chr13:22,985,557...23,005,756
JBrowse link
G Slc39a8 solute carrier family 39 member 8 acts_upstream_of ISO
ISS
(PMID:29337306)
(MGI:6117959|PMID:29337306)
GO_REF:0000024
RGD
UniProt
PMID:29337306 GO_REF:0000024 MGI:6117959 NCBI chr 2:224,171,787...224,319,326
Ensembl chr 2:224,256,654...224,319,129
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2450311|MGI:3605892 (MGI:3776329|PMID:18267097) RGD PMID:18267097 MGI:3776329 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2385468|MGI:2450311 (MGI:3709829|PMID:17350610), (MGI:5523731|PMID:24191021) RGD PMID:17350610 PMID:24191021 MGI:3709829 MGI:5523731 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within ISO MGI:3709554 (MGI:3700412|PMID:17174946) RGD PMID:17174946 MGI:3700412 NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119
JBrowse link
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:28,036,909...28,064,272
Ensembl chr20:28,033,475...28,064,272
JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:1888389 (MGI:2156271|PMID:11784073), (MGI:3522686|PMID:15528466) RGD PMID:11784073 PMID:15528466 MGI:2156271 MGI:3522686 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tgfbi transforming growth factor, beta induced involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (MGI:3510270|PMID:15381731) RGD PMID:15381731 MGI:3510270 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 7:85,566,520...85,594,526
Ensembl chr 7:85,566,520...85,594,538
JBrowse link
G Tnr tenascin R involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154583 (MGI:1337730|PMID:10341229), (MGI:1927381|PMID:11077416), (MGI:3652670|PMID:16870730)
Ensembl
RGD
PMID:10341229 PMID:11077416 PMID:16870730 GO_REF:0000107 MGI:1337730 MGI:1927381 MGI:3652670 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO MGI:3053791 (MGI:3052884|PMID:15242785) RGD PMID:15242785 MGI:3052884
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:2136645|MGI:2450311 (MGI:3619780|PMID:16537898) RGD PMID:16537898 MGI:3619780 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
G Vit vitrin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 6:16,445,966...16,565,644
Ensembl chr 6:16,445,955...16,565,665
JBrowse link
G Vtn vitronectin acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 acts_upstream_of_or_within ISO MGI:3809230 (MGI:3807344|PMID:18757743), (MGI:3849094|PMID:19279005) RGD PMID:18757743 PMID:19279005 MGI:3807344 MGI:3849094 NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3793974|PMID:17943183) RGD PMID:17943183 MGI:3793974 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (MGI:5588521|PMID:23900597) RGD PMID:23900597 MGI:5588521 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 acts_upstream_of_or_within ISO MGI:3665440|MGI:6363079 (MGI:6277636|PMID:30659184) RGD PMID:30659184 MGI:6277636 NCBI chr 2:174,856,339...174,868,922
Ensembl chr 2:174,856,397...174,868,919
JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a3 collagen type IV alpha 3 chain involved_in ISO (MGI:3610934|PMID:12631063) RGD PMID:12631063 MGI:3610934 NCBI chr 9:83,875,958...84,004,955
Ensembl chr 9:83,875,561...84,001,895
JBrowse link
G Col4a4 collagen type IV alpha 4 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1857960 (MGI:1347142|PMID:10534397)
(PMID:17942953), (PMID:19675380)
RGD PMID:10534397 PMID:17942953 PMID:19675380 PMID:21873635 MGI:1347142, RGD:13792537 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:4360160|PMID:18480751) RGD PMID:18480751 MGI:4360160 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 involved_in ISO (MGI:3776221|PMID:16041630) RGD PMID:16041630 MGI:3776221 NCBI chr 6:25,221,668...25,236,241
Ensembl chr 6:25,222,896...25,236,244
JBrowse link
G Myo1e myosin IE involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4441423|PMID:19005011)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19005011 GO_REF:0000024 GO_REF:0000107 MGI:4441423 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169
JBrowse link
G Nid1 nidogen 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2682959 (MGI:2680880|PMID:14566019)
Ensembl
RGD
PMID:14566019 GO_REF:0000107 MGI:2680880 NCBI chr17:86,085,046...86,158,277
Ensembl chr17:86,085,077...86,158,267
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
IBA
GO_REF:0000107
UniProtKB:Q8CFG0 (MGI:5306737|PMID:21719793)
PMID:21873635
Ensembl
RGD
PMID:21719793 PMID:21873635 GO_REF:0000107 MGI:5306737, RGD:13792537 NCBI chr 5:6,362,896...6,526,174
Ensembl chr 5:6,362,911...6,525,584
JBrowse link
G Sulf2 sulfatase 2 involved_in IBA
ISO
PMID:21873635
UniProtKB:Q8K007 (MGI:5306737|PMID:21719793)
RGD PMID:21719793 PMID:21873635 MGI:5306737, RGD:13792537 NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415
JBrowse link
G Wt1 WT1 transcription factor involved_in ISO
ISS
(PMID:19205749)
GO_REF:0000024
RGD
UniProt
PMID:19205749 GO_REF:0000024 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2138070 (MGI:3664526|PMID:16886065), (MGI:75217|PMID:7670489)
Ensembl
RGD
PMID:7670489 PMID:16886065 GO_REF:0000107 MGI:3664526 MGI:75217 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chadl chondroadherin-like involved_in ISO (PMID:25451920) RGD PMID:25451920 NCBI chr 7:113,205,323...113,218,678
Ensembl chr 7:113,210,748...113,217,272
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (MGI:5605894|PMID:25056700) RGD PMID:25056700 MGI:5605894 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antxr1 ANTXR cell adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5754386 (MGI:5662198|PMID:25572963)
Ensembl
RGD
PMID:25572963 GO_REF:0000107 MGI:5662198 NCBI chr 4:119,590,770...119,778,232
Ensembl chr 4:119,590,771...119,778,232
JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO
IEA
(PMID:28341552)
GO_REF:0000107
RGD
Ensembl
PMID:28341552 GO_REF:0000107 NCBI chr17:22,930,012...22,993,834
Ensembl chr17:22,930,740...22,993,826
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:6158728|PMID:26491108) RGD PMID:26491108 MGI:6158728 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P25119 (MGI:6158728|PMID:26491108)
Ensembl
RGD
PMID:26491108 GO_REF:0000107 MGI:6158728 NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO UniProtKB:P25118 (MGI:6158728|PMID:26491108) RGD PMID:26491108 MGI:6158728 NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206
JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:16651416)
UniProt
RGD
PMID:16651416 GO_REF:0000024 NCBI chr 3:46,962,243...47,043,870
Ensembl chr 3:46,962,243...47,043,901
JBrowse link
G Fap fibroblast activation protein, alpha involved_in ISO (PMID:16651416) RGD PMID:16651416 NCBI chr 3:47,138,823...47,207,671
Ensembl chr 3:47,138,813...47,225,545
JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fap fibroblast activation protein, alpha involved_in ISO (PMID:10455171) RGD PMID:10455171 NCBI chr 3:47,138,823...47,207,671
Ensembl chr 3:47,138,813...47,225,545
JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO UniProtKB:Q86SQ0|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Phldb1 pleckstrin homology-like domain, family B, member 1 involved_in ISO
IEA
UniProtKB:Q7Z460|UniProtKB:Q86SQ0 (PMID:23940118)
GO_REF:0000107
RGD
Ensembl
PMID:23940118 GO_REF:0000107 NCBI chr 8:45,003,538...45,051,541
Ensembl chr 8:45,003,538...45,051,522
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO UniProtKB:Q7Z460|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 involved_in ISO (PMID:27402836) RGD PMID:27402836 NCBI chr16:18,319,796...18,332,106
Ensembl chr16:18,319,795...18,332,106
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5660411|PMID:26178373), (MGI:5695689|PMID:26220971), (MGI:6158865|PMID:26711913) RGD PMID:26178373 PMID:26220971 PMID:26711913 MGI:5660411 MGI:5695689 MGI:6158865 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:6112863|PMID:29304157)
Ensembl
RGD
PMID:29304157 GO_REF:0000107 MGI:6112863 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (MGI:5605894|PMID:25056700) RGD PMID:25056700 MGI:5605894 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:21307346) RGD PMID:21307346 NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:21307346) RGD PMID:21307346 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2176205|MGI:2385468 (MGI:4848001|PMID:20881014) RGD PMID:20881014 MGI:4848001 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21419085 RGD:5129171 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:3640731|PMID:16730346)
Ensembl
RGD
PMID:16730346 GO_REF:0000107 MGI:3640731 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Cpb2 carboxypeptidase B2 IMP RGD PMID:23369837 RGD:7243115 NCBI chr15:50,557,722...50,606,569
Ensembl chr15:50,557,717...50,606,556
JBrowse link
G Hdhd2 haloacid dehalogenase-like hydrolase domain containing 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:70,475,037...70,526,471
Ensembl chr18:70,474,926...70,526,470
JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISO (PMID:33122427) RGD PMID:33122427 NCBI chr 4:132,331,372...132,342,316
Ensembl chr 4:132,332,180...132,342,316
JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19158077) RGD PMID:19158077 NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in ISO (PMID:26466680), (PMID:26578515) RGD PMID:26466680 PMID:26578515 NCBI chr19:33,571,255...33,586,783
Ensembl chr19:33,574,257...33,586,965
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (MGI:2158097|PMID:11723120) RGD PMID:11723120 MGI:2158097 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20137952)
Ensembl
UniProt
RGD
PMID:20137952 GO_REF:0000024 GO_REF:0000107 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:26587789) RGD PMID:26587789 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Meltf melanotransferrin involved_in ISO (PMID:16713448) RGD PMID:16713448 NCBI chr11:68,884,446...68,906,300
Ensembl chr11:68,884,446...68,906,300
JBrowse link
G Pdpn podoplanin involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:25486435)
UniProt
RGD
PMID:25486435 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:5688835|PMID:21984612) RGD PMID:21984612 MGI:5688835 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase IMP RGD PMID:19846571 RGD:8693597 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:24691542 RGD:11341715 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO (MGI:6112863|PMID:29304157) RGD PMID:29304157 MGI:6112863 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp1 AE binding protein 1 involved_in ISO
IEA
ISS
(PMID:29606302)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:29606302 GO_REF:0000024 GO_REF:0000107 NCBI chr14:80,738,800...80,748,878
Ensembl chr14:80,738,892...80,748,877
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5776647|PMID:26690653) RGD PMID:26690653 MGI:5776647 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO UniProtKB:P00797 (PMID:17416596) RGD PMID:17416596 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Has2 hyaluronan synthase 2 IMP RGD PMID:27094859 RGD:12910548 NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5298073|PMID:21311046) RGD PMID:21311046 MGI:5298073 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 acts_upstream_of ISO (MGI:6370101|PMID:31319059) RGD PMID:31319059 MGI:6370101 NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592
JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:31932796) RGD PMID:31932796 NCBI chr 1:227,285,510...227,384,553
Ensembl chr 1:227,285,210...227,382,863
JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in ISO
IEA
ISS
(PMID:12065315)
GO_REF:0000107
(MGI:3629583|PMID:12065315)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12065315 GO_REF:0000024 GO_REF:0000107 MGI:3629583 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IMP RGD PMID:16738537 RGD:2313717 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:20876804)
UniProt
RGD
PMID:20876804 GO_REF:0000024 NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (MGI:4840122|PMID:20980600) RGD PMID:20980600 MGI:4840122 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (MGI:4840122|PMID:20980600) RGD PMID:20980600 MGI:4840122 NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
JBrowse link
G Angptl7 angiopoietin like 7 involved_in ISO (PMID:21199193) RGD PMID:21199193 NCBI chr 5:158,932,094...158,937,597
Ensembl chr 5:158,932,794...158,937,324
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within ISO MGI:2175913 (MGI:5462513|PMID:22984613) RGD PMID:22984613 MGI:5462513 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO MGI:3703328 (MGI:3702795|PMID:16943282) RGD PMID:16943282 MGI:3702795 NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:26376865) RGD PMID:26376865 NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:5522599|PMID:24038871) RGD PMID:24038871 MGI:5522599 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:1888389 (MGI:5140242|PMID:21780244) RGD PMID:21780244 MGI:5140242 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (MGI:3766861|PMID:17881493) RGD PMID:17881493 MGI:3766861 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          external encapsulating structure organization 316
            S-layer organization 0
            capsule organization + 0
            cell envelope organization + 2
            cell wall organization + 0
            eggshell chorion assembly + 0
            exosporium assembly 0
            extracellular matrix organization + 314
            pollen wall assembly + 0
            slime layer organization + 0
paths to the root