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ONTOLOGY REPORT - ANNOTATIONS


Term:extracellular matrix organization
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Accession:GO:0030198 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.
Synonyms:exact_synonym: extracellular matrix organisation
 related_synonym: extracellular matrix organization and biogenesis



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extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07049085.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:99,964,486...100,918,384 JBrowse link
G AABR07060833.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:94,944,360...94,981,873 JBrowse link
G AABR07069011.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Abi3bp ABI family member 3 binding protein acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
JBrowse link
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 7:14,331,659...14,361,620
Ensembl chr 7:14,331,745...14,361,620
JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 3:10,299,264...10,338,464
Ensembl chr 3:10,300,028...10,346,687
JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:29,143,029...29,219,846
Ensembl chr20:29,144,354...29,219,866
JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249
JBrowse link
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:32,430,436...32,562,481
Ensembl chr 1:32,430,436...32,560,494
JBrowse link
G Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:120,445,800...120,768,204
Ensembl chr 1:120,445,749...120,768,202
JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr19:41,686,951...41,840,035
Ensembl chr19:41,688,617...41,839,781
JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:34,920,996...35,126,465
Ensembl chr10:34,921,049...35,123,821
JBrowse link
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3778519|PMID:18454205)
PMID:21873635
RGD PMID:18454205 PMID:21873635 MGI:3778519, RGD:13792537 NCBI chr 7:125,396,227...125,528,020
Ensembl chr 7:125,397,734...125,527,777
JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1, motif 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:18,231,051...18,437,773
Ensembl chr14:18,231,165...18,435,556
JBrowse link
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr13:83,670,556...83,680,045
Ensembl chr13:83,670,183...83,680,065
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
JBrowse link
G Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:35,421,483...35,633,305
Ensembl chr 2:35,421,510...35,633,298
JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:90,704,727...90,744,331
Ensembl chr 8:90,704,727...90,744,328
JBrowse link
G Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:29,349,078...29,368,413
Ensembl chr 8:29,349,114...29,368,404
JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 involved_in ISO
IBA
(MGI:4452308|PMID:20096780)
PMID:21873635
RGD PMID:20096780 PMID:21873635 MGI:4452308, RGD:13792537 NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
JBrowse link
G Adamtsl2 ADAMTS-like 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5638958|PMID:25762570)
PMID:21873635
RGD PMID:25762570 PMID:21873635 PMID:21873635 MGI:5638958, RGD:13792537, RGD:13792537 NCBI chr 3:10,397,774...10,434,557
Ensembl chr 3:10,404,626...10,434,554
JBrowse link
G Adamtsl3 ADAMTS-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:136,288,793...136,596,986
Ensembl chr 1:136,288,793...136,596,986
JBrowse link
G Adamtsl4 ADAMTS-like 4 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:183,235,634...183,247,091
Ensembl chr 2:183,235,646...183,246,848
JBrowse link
G Adamtsl5 ADAMTS-like 5 NOT|involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,362,623...9,371,248
Ensembl chr 7:9,363,237...9,370,285
JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2136636 (MGI:2385816|PMID:9734405) RGD PMID:9734405 MGI:2385816 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO MGI:108405 (MGI:3614238|PMID:16407979) RGD PMID:16407979 MGI:3614238 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 acts_upstream_of_or_within ISO MGI:107765 (MGI:3614238|PMID:16407979) RGD PMID:16407979 MGI:3614238 NCBI chr14:41,557,918...41,878,622 JBrowse link
G Aplp1 amyloid beta precursor like protein 1 acts_upstream_of_or_within ISO MGI:88047|MGI:88059 (MGI:3056838|PMID:15385965) RGD PMID:15385965 MGI:3056838 NCBI chr 1:85,696,880...85,707,215
Ensembl chr 1:85,696,882...85,707,155
JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO MGI:88046|MGI:88059 (MGI:3056838|PMID:15385965) RGD PMID:15385965 MGI:3056838 NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855
JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:88046|MGI:88047 (MGI:3056838|PMID:15385965)
UniProt
RGD
PMID:15385965 GO_REF:0000024 MGI:3056838 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097 (MGI:53994|PMID:1115218) RGD PMID:1115218 MGI:53994 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Atxn1l ataxin 1-like acts_upstream_of_or_within ISO MGI:5301616 (MGI:5298126|PMID:22014525) RGD PMID:22014525 MGI:5298126
G B4galt1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388614 (MGI:84206|PMID:8787759)
MGI:2178779 (MGI:2178150|PMID:11900463)
Ensembl
RGD
PMID:8787759 PMID:11900463 GO_REF:0000107 MGI:2178150 MGI:84206 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:2158443 (MGI:3655550|PMID:10586052) RGD PMID:10586052 MGI:3655550 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
JBrowse link
G Ccdc80 coiled-coil domain containing 80 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137
JBrowse link
G Ccn1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Col10a1 collagen type X alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494
JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,786,929...4,816,598
Ensembl chr20:4,786,929...4,815,985
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032
JBrowse link
G Col15a1 collagen type XV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
JBrowse link
G Col17a1 collagen type XVII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:246,530,589...246,577,632
Ensembl chr 1:246,531,367...246,577,632
JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2179134 (MGI:3054601|PMID:15254016)
RGD PMID:15254016 PMID:21873635 PMID:21873635 MGI:3054601, RGD:13792537, RGD:13792537 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
JBrowse link
G Col19a1 collagen type XIX alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3053870 (MGI:3053247|PMID:15302855)
RGD PMID:15302855 PMID:21873635 PMID:21873635 MGI:3053247, RGD:13792537, RGD:13792537 NCBI chr 9:26,673,916...27,022,139
Ensembl chr 9:26,675,391...27,022,106
JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
JBrowse link
G Col22a1 collagen type XXII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462
JBrowse link
G Col23a1 collagen type XXIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:35,549,090...35,839,152
Ensembl chr10:35,549,113...35,836,314
JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441
JBrowse link
G Col25a1 collagen type XXV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:218,755,152...219,154,348
Ensembl chr 2:218,755,691...219,153,501
JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5315593 (MGI:5315238|PMID:22206015)
RGD PMID:22206015 PMID:21873635 PMID:21873635 MGI:5315238, RGD:13792537, RGD:13792537 NCBI chr 5:76,647,302...76,765,987
Ensembl chr 5:76,647,429...76,765,174
JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in IBA
ISO
PMID:21873635
MGI:1857431|MGI:1860700 (MGI:5604911|PMID:25330296), (MGI:6405577|PMID:31655293)
RGD PMID:25330296 PMID:31655293 PMID:21873635 MGI:5604911 MGI:6405577, RGD:13792537 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
JBrowse link
G Col4a2 collagen type IV alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839
JBrowse link
G Col4a3 collagen type IV alpha 3 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 9:83,875,958...84,004,955
Ensembl chr 9:83,875,561...84,001,895
JBrowse link
G Col4a4 collagen type IV alpha 4 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876
JBrowse link
G Col4a5 collagen type IV alpha 5 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr  X:105,118,762...105,322,699
Ensembl chr  X:105,118,820...105,322,692
JBrowse link
G Col4a6 collagen type IV alpha 6 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2148900|PMID:10965041)
RGD PMID:10965041 PMID:21873635 PMID:21873635 MGI:2148900, RGD:13792537, RGD:13792537 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500
JBrowse link
G Col5a1 collagen type V alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:47,448,736...47,598,396
Ensembl chr 9:47,448,736...47,598,154
JBrowse link
G Col5a3 collagen type V alpha 3 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853
JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
JBrowse link
G Col6a4 collagen, type VI, alpha 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:106,617,169...106,733,499
Ensembl chr 8:106,617,050...106,733,263
JBrowse link
G Col6a5 collagen type VI alpha 5 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:106,483,806...106,584,114
Ensembl chr 8:106,483,799...106,584,113
JBrowse link
G Col8a1 collagen type VIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424
JBrowse link
G Col8a2 collagen type VIII alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 5:138,586,201...138,613,627
Ensembl chr 5:138,585,999...138,612,850
JBrowse link
G Col9a1 collagen type IX alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:26,585,034...26,668,222
Ensembl chr 9:26,585,034...26,668,213
JBrowse link
G Col9a2 collagen type IX alpha 2 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:134,607,616...134,624,678
Ensembl chr 5:134,607,616...134,624,677
JBrowse link
G Col9a3 collagen type IX alpha 3 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 3:167,711,776...167,734,468
Ensembl chr 3:167,711,840...167,734,465
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107
JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr19:48,053,153...48,111,485
Ensembl chr19:48,053,287...48,110,465
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO MGI:4947395 (MGI:4946456|PMID:21148564) RGD PMID:21148564 MGI:4946456 NCBI chr16:20,995,210...21,330,586
Ensembl chr16:21,235,784...21,330,319
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (MGI:5294250|PMID:21972064) RGD PMID:21972064 MGI:5294250 NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659
JBrowse link
G Ecm2 extracellular matrix protein 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3807344|PMID:18757743)
PMID:21873635
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr17:15,120,194...15,152,536
Ensembl chr17:15,120,196...15,152,516
JBrowse link
G Egfl6 EGF-like-domain, multiple 6 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr  X:27,884,087...27,942,044
Ensembl chr  X:27,884,125...27,942,044
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298
JBrowse link
G Elf3 E74 like ETS transcription factor 3 acts_upstream_of_or_within ISO MGI:2662485 (MGI:2179164|PMID:11984530) RGD PMID:11984530 MGI:2179164 NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481
JBrowse link
G Eln elastin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Emilin1 elastin microfibril interfacer 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (MGI:1267106|PMID:9651581) RGD PMID:9651581 MGI:1267106 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO MGI:1859815|MGI:1914725 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478
JBrowse link
G Ero1b endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO MGI:1354385|MGI:1859815 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr17:85,861,086...86,003,244
Ensembl chr17:85,929,618...86,003,398
JBrowse link
G Fbln1 fibulin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075
JBrowse link
G Fbln2 fibulin 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:123,704,289...123,763,857
Ensembl chr 4:123,704,373...123,763,948
JBrowse link
G Fbln5 fibulin 5 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755
JBrowse link
G Fn1 fibronectin 1 IMP RGD PMID:12388756 RGD:1358623 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1347479 (MGI:3617131|PMID:16439479) RGD PMID:16439479 MGI:3617131 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within ISO MGI:1347470|MGI:2667134 (MGI:3617131|PMID:16439479) RGD PMID:16439479 MGI:3617131 NCBI chr17:32,835,730...32,842,555 JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO MGI:2183221 (MGI:3719550|PMID:11487638) RGD PMID:11487638 MGI:3719550 NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
JBrowse link
G Gfod2 glucose-fructose oxidoreductase domain containing 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr19:33,599,689...33,647,060
Ensembl chr19:33,604,187...33,647,004
JBrowse link
G Hpse2 heparanase 2 (inactive) acts_upstream_of_or_within ISO MGI:4308701 (MGI:5621237|PMID:25510506) RGD PMID:25510506 MGI:5621237 NCBI chr 1:241,582,904...242,284,348
Ensembl chr 1:241,583,187...242,246,118
JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 3:79,990,048...80,113,556
Ensembl chr 3:79,990,056...80,113,617
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (MGI:1349497|PMID:10579729) RGD PMID:10579729 MGI:1349497 NCBI chr 5:149,677,437...149,778,594 JBrowse link
G Ibsp integrin-binding sialoprotein involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
(MGI:3807344|PMID:18757743)
PMID:21873635
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18757743 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3807344, RGD:13792537 NCBI chr14:5,439,825...5,452,570
Ensembl chr14:5,439,829...5,452,693
JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO MGI:2176236 (MGI:5632446|PMID:25410057) RGD PMID:25410057 MGI:5632446 NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:6693683 (MGI:6423642|PMID:32265257)
GO_REF:0000107
RGD
Ensembl
PMID:32265257 GO_REF:0000107 MGI:6423642 NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722
JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:6693686 (MGI:6423642|PMID:32265257)
GO_REF:0000107
RGD
Ensembl
PMID:32265257 GO_REF:0000107 MGI:6423642 NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382
JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO MGI:2181699 (MGI:1355040|PMID:10742111) RGD PMID:10742111 MGI:1355040 NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510
JBrowse link
G Itih1 inter-alpha trypsin inhibitor, heavy chain 1 acts_upstream_of_or_within ISO (MGI:3761906|PMID:17675295) RGD PMID:17675295 MGI:3761906 NCBI chr16:6,122,246...6,136,363
Ensembl chr16:6,122,248...6,136,363
JBrowse link
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:243,939,596...243,943,060
Ensembl chr 1:243,939,647...243,943,059
JBrowse link
G Lgals3 galectin 3 acts_upstream_of_or_within ISO MGI:97011 (MGI:3589495|PMID:15800063) RGD PMID:15800063 MGI:3589495 NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025
JBrowse link
G LOC103694328 alanine and glycine-rich protein-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:37,700,341...37,711,524
Ensembl chr19:37,700,106...37,711,538
JBrowse link
G Matn3 matrilin 3 involved_in ISO (MGI:1353153|PMID:10660556) RGD PMID:10660556 MGI:1353153 NCBI chr 6:31,748,383...31,768,101
Ensembl chr 6:31,748,474...31,768,101
JBrowse link
G Mia MIA SH3 domain containing involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2159701 (MGI:2158918|PMID:11839810)
RGD PMID:11839810 PMID:21873635 MGI:2158918, RGD:13792537 NCBI chr 1:82,473,677...82,476,378
Ensembl chr 1:82,473,678...82,475,370
JBrowse link
G Mmp10 matrix metallopeptidase 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,689,840...4,697,748
Ensembl chr 8:4,689,840...4,697,748
JBrowse link
G Mmp11 matrix metallopeptidase 11 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2387934 (MGI:3822602|PMID:18622425)
RGD PMID:18622425 PMID:21873635 MGI:3822602, RGD:13792537 NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Mmp15 matrix metallopeptidase 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:9,663,449...9,684,943
Ensembl chr19:9,663,449...9,684,943
JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:31,312,280...31,556,276
Ensembl chr 5:31,312,280...31,548,388
JBrowse link
G Mmp17 matrix metallopeptidase 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:27,074,398...27,099,317
Ensembl chr12:27,074,409...27,099,316
JBrowse link
G Mmp19 matrix metallopeptidase 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:1,221,229...1,229,555
Ensembl chr 7:1,221,343...1,229,555
JBrowse link
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,598,326...4,606,965
Ensembl chr 8:4,598,391...4,606,965
JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Mmp20 matrix metallopeptidase 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,789,415...4,830,035
Ensembl chr 8:4,789,415...4,830,035
JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855
JBrowse link
G Mmp23 matrix metallopeptidase 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:166,239,643...166,242,734
Ensembl chr 5:166,239,644...166,242,433
JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,279,096...144,323,572
Ensembl chr 3:144,279,096...144,323,572
JBrowse link
G Mmp27 matrix metallopeptidase 27 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,745,887...4,755,806
Ensembl chr 8:4,745,883...4,755,806
JBrowse link
G Mmp28 matrix metallopeptidase 28 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,243,748...68,264,728
Ensembl chr10:68,241,138...68,264,866
JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,640,397...4,653,963
Ensembl chr 8:4,640,416...4,653,961
JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902
JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:4,724,009...4,732,956
Ensembl chr 8:4,724,029...4,733,520
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1932294|MGI:96778 (MGI:3589495|PMID:15800063)
PMID:21873635
Ensembl
RGD
PMID:15800063 PMID:21873635 GO_REF:0000107 MGI:3589495, RGD:13792537 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mpzl3 myelin protein zero-like 3 acts_upstream_of_or_within ISO MGI:1857012 (MGI:3055636|PMID:15482472) RGD PMID:15482472 MGI:3055636 NCBI chr 8:45,360,475...45,380,662
Ensembl chr 8:45,349,054...45,380,662
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857973 (MGI:3624056|PMID:16554364) RGD PMID:16554364 MGI:3624056 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Ndnf neuron-derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 4:94,944,749...94,987,414 JBrowse link
G Nepn nephrocan involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:31,783,526...31,799,458
Ensembl chr20:31,783,526...31,799,446
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857478 (MGI:3655425|PMID:16835260)
HGNC-UCL
RGD
PMID:16835260 GO_REF:0000024 MGI:3655425 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 acts_upstream_of_or_within ISO MGI:2179705 (MGI:3655550|PMID:10586052) RGD PMID:10586052 MGI:3655550 NCBI chr 1:245,164,586...245,173,225
Ensembl chr 1:245,165,950...245,173,213
JBrowse link
G Nid1 nidogen 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr17:86,085,046...86,158,277
Ensembl chr17:86,085,077...86,158,267
JBrowse link
G Nox1 NADPH oxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3616995 (MGI:3615064|PMID:16386251)
Ensembl
RGD
PMID:16386251 GO_REF:0000107 MGI:3615064 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236
JBrowse link
G Nphp3 nephrocystin 3 acts_upstream_of_or_within ISO MGI:1856987 (MGI:71873|PMID:7539536) RGD PMID:7539536 MGI:71873 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176560 (MGI:3615102|PMID:16424942) RGD PMID:16424942 MGI:3615102 NCBI chr20:46,050,134...46,070,569
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Olfml2a olfactomedin-like 2A acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 3:22,688,562...22,717,745
Ensembl chr 3:22,688,598...22,717,909
JBrowse link
G Olfml2b olfactomedin-like 2B acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr13:82,869,414...82,906,607
Ensembl chr13:82,869,433...82,906,607
JBrowse link
G Otol1 otolin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 2:154,339,612...154,349,050
Ensembl chr 2:154,339,612...154,349,023
JBrowse link
G Papln papilin, proteoglycan-like sulfated glycoprotein involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 6:103,398,166...103,432,199
Ensembl chr 6:103,398,838...103,432,206
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926728 (MGI:3525374|PMID:15543606)
Ensembl
RGD
PMID:15543606 GO_REF:0000107 MGI:3525374 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Pomt1 protein-O-mannosyltransferase 1 acts_upstream_of_or_within ISO MGI:3497739 (MGI:3057057|PMID:15383666) RGD PMID:15383666 MGI:3057057 NCBI chr 3:15,520,717...15,538,579
Ensembl chr 3:15,520,481...15,538,581
JBrowse link
G Postn periostin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3610687|PMID:16314533)
RGD PMID:16314533 PMID:21873635 MGI:3610687, RGD:13792537 NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
JBrowse link
G Prdx4 peroxiredoxin 4 acts_upstream_of_or_within ISO MGI:1354385|MGI:1914725 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr  X:40,026,762...40,044,066
Ensembl chr  X:40,026,651...40,044,066
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:2684666 (MGI:2679914|PMID:14642275) RGD PMID:14642275 MGI:2679914 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (MGI:3761906|PMID:17675295) RGD PMID:17675295 MGI:3761906 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
G Pxdn peroxidasin involved_in ISO (PMID:19590037)
(MGI:3851833|PMID:19590037)
RGD PMID:19590037 MGI:3851833 NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3623517 (MGI:3621661|PMID:11747814)
RGD PMID:11747814 PMID:21873635 MGI:3621661, RGD:13792537 NCBI chr 5:58,102,915...58,169,513
Ensembl chr 5:58,102,981...58,169,502
JBrowse link
G RGD1562885 similar to RIKEN cDNA 2300002M23 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:3,172,330...3,173,886 JBrowse link
G Rxfp1 relaxin family peptide receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3054831 (MGI:3054144|PMID:15256493)
Ensembl
RGD
PMID:15256493 GO_REF:0000107 MGI:3054144 NCBI chr 2:164,772,270...164,893,484
Ensembl chr 2:164,774,799...164,893,412
JBrowse link
G Scara3 scavenger receptor class A, member 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:40,139,873...40,172,866
Ensembl chr15:40,140,161...40,172,894
JBrowse link
G Serac1 serine active site containing 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:46,620,741...46,656,801
Ensembl chr 1:46,620,498...46,656,727
JBrowse link
G Serpinb5 serpin family B member 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3040188 (MGI:3806752|PMID:18593913)
Ensembl
RGD
PMID:18593913 GO_REF:0000107 MGI:3806752 NCBI chr13:22,985,557...23,005,756
Ensembl chr13:22,985,557...23,005,756
JBrowse link
G Slc39a8 solute carrier family 39 member 8 acts_upstream_of ISO
ISS
(PMID:29337306)
(MGI:6117959|PMID:29337306)
GO_REF:0000024
RGD
UniProt
PMID:29337306 GO_REF:0000024 MGI:6117959 NCBI chr 2:224,171,787...224,319,326
Ensembl chr 2:224,256,654...224,319,129
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2450311|MGI:3605892 (MGI:3776329|PMID:18267097) RGD PMID:18267097 MGI:3776329 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2385468|MGI:2450311 (MGI:3709829|PMID:17350610), (MGI:5523731|PMID:24191021) RGD PMID:17350610 PMID:24191021 MGI:3709829 MGI:5523731 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within ISO MGI:3709554 (MGI:3700412|PMID:17174946) RGD PMID:17174946 MGI:3700412 NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119
JBrowse link
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:28,036,909...28,064,272
Ensembl chr20:28,033,475...28,064,272
JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:1888389 (MGI:2156271|PMID:11784073), (MGI:3522686|PMID:15528466) RGD PMID:11784073 PMID:15528466 MGI:2156271 MGI:3522686 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tgfbi transforming growth factor, beta induced involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (MGI:3510270|PMID:15381731) RGD PMID:15381731 MGI:3510270 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 7:85,566,520...85,594,526
Ensembl chr 7:85,566,520...85,594,538
JBrowse link
G Tnr tenascin R involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154583 (MGI:1337730|PMID:10341229), (MGI:1927381|PMID:11077416), (MGI:3652670|PMID:16870730)
Ensembl
RGD
PMID:10341229 PMID:11077416 PMID:16870730 GO_REF:0000107 MGI:1337730 MGI:1927381 MGI:3652670 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO MGI:3053791 (MGI:3052884|PMID:15242785) RGD PMID:15242785 MGI:3052884
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:2136645|MGI:2450311 (MGI:3619780|PMID:16537898) RGD PMID:16537898 MGI:3619780 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
G Vit vitrin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 6:16,445,966...16,565,644
Ensembl chr 6:16,445,955...16,565,665
JBrowse link
G Vtn vitronectin acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 acts_upstream_of_or_within ISO MGI:3809230 (MGI:3807344|PMID:18757743), (MGI:3849094|PMID:19279005) RGD PMID:18757743 PMID:19279005 MGI:3807344 MGI:3849094 NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3793974|PMID:17943183) RGD PMID:17943183 MGI:3793974 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
G Lamb2 laminin subunit beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
JBrowse link
G Lamb3 laminin subunit beta 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405
JBrowse link
G Ntn4 netrin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390
JBrowse link
G Ntng1 netrin G1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:197,462,785...197,827,681
Ensembl chr 2:197,463,945...197,826,997
JBrowse link
G Ntng2 netrin G2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO MGI:3620600|MGI:3620601|MGI:3620603 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3772552|PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:86,187,366...86,190,692 JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cma1 chymase 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233
JBrowse link
G Ctss cathepsin S involved_in ISO
IEA
(PMID:22952693)
(MGI:5553237|PMID:22952693)
GO_REF:0000107
RGD
Ensembl
PMID:22952693 GO_REF:0000107 MGI:5553237 NCBI chr 2:183,089,192...183,114,483
Ensembl chr 2:183,086,437...183,114,483
JBrowse link
G Hpn hepsin involved_in ISO
IEA
ISS
(PMID:16908524)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16908524 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180364 (MGI:2176684|PMID:11884617)
Ensembl
RGD
PMID:11884617 GO_REF:0000107 MGI:2176684 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cav2 caveolin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180372 (MGI:2176684|PMID:11884617)
Ensembl
RGD
PMID:11884617 GO_REF:0000107 MGI:2176684 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:18160688), (PMID:19949034), (PMID:23065703) RGD PMID:18160688 PMID:19949034 PMID:23065703 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within ISO MGI:1934902 (MGI:5470500|PMID:23217742) RGD PMID:23217742 MGI:5470500 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5766597|PMID:26024086) RGD PMID:26024086 MGI:5766597 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (MGI:5571208|PMID:24681597) RGD PMID:24681597 MGI:5571208 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4950310|PMID:21350012)
UniProt
RGD
PMID:21350012 GO_REF:0000024 MGI:4950310 NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO MGI:2384087 (MGI:1313058|PMID:9811848) RGD PMID:9811848 MGI:1313058 NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
JBrowse link
G Gas2 growth arrest-specific 2 acts_upstream_of_or_within ISO MGI:6187669 (MGI:6102554|PMID:27734842) RGD PMID:27734842 MGI:6102554 NCBI chr 1:101,452,361...101,582,619
Ensembl chr 1:101,482,591...101,582,619
JBrowse link
G Hmcn1 hemicentin 1 involved_in ISO (MGI:6762317|PMID:34504132) RGD PMID:34504132 MGI:6762317 NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5571208|PMID:24681597)
Ensembl
RGD
PMID:24681597 GO_REF:0000107 MGI:5571208 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO MGI:2387934 (MGI:3822602|PMID:18622425) RGD PMID:18622425 MGI:3822602 NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:3613258|PMID:16436605) RGD PMID:16436605 MGI:3613258 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3608888 (MGI:4849883|PMID:21069829)
Ensembl
RGD
PMID:21069829 GO_REF:0000107 MGI:4849883 NCBI chr 1:195,935,162...195,941,469
Ensembl chr 1:195,935,349...195,941,467
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:2156187 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616
JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2183192 (MGI:3610667|PMID:16186342) RGD PMID:16186342 MGI:3610667 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
biofilm matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G involved_in ISO (PMID:32995850) RGD PMID:32995850 NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353
JBrowse link
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856465 (MGI:2664273|PMID:3070812)
Ensembl
RGD
PMID:3070812 GO_REF:0000107 MGI:2664273 NCBI chr 1:132,981,034...133,044,416
Ensembl chr 1:132,981,582...133,043,627
JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO MGI:1347346|MGI:2146046 (MGI:6193362|PMID:29618652) RGD PMID:29618652 MGI:6193362 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 acts_upstream_of_or_within ISO (MGI:2158963|PMID:11741898) RGD PMID:11741898 MGI:2158963 NCBI chr20:29,143,029...29,219,846
Ensembl chr20:29,144,354...29,219,866
JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 acts_upstream_of_or_within ISO MGI:2388161 (MGI:3621082|PMID:16556917) RGD PMID:16556917 MGI:3621082 NCBI chr10:34,920,996...35,126,465
Ensembl chr10:34,921,049...35,123,821
JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:1347346|MGI:2146046 (MGI:6193362|PMID:29618652) RGD PMID:29618652 MGI:6193362 NCBI chr 8:90,704,727...90,744,331
Ensembl chr 8:90,704,727...90,744,328
JBrowse link
G Anxa2 annexin A2 acts_upstream_of_or_within ISO MGI:3028929 (MGI:3027337|PMID:14702107) RGD PMID:14702107 MGI:3027337 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:1856101|MGI:1856102|MGI:3588774 (MGI:3616522|PMID:16338116), (MGI:53875|PMID:4808708), (MGI:54357|PMID:20889), (MGI:83737|PMID:8096378), (MGI:83811|PMID:8895222) RGD PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 MGI:3616522 MGI:53875 MGI:54357 MGI:83737 MGI:83811 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within TAS
ISO
MGI:1856399|MGI:88457 (MGI:2664273|PMID:3070812), (MGI:3694610|PMID:17029294), (MGI:3766851|PMID:17683922), (MGI:5014156|PMID:21467034), (MGI:53676|PMID:4100752), (MGI:53732|PMID:4110409), (MGI:70833|PMID:7859283) RGD PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 More... MGI:2664273 MGI:3694610 MGI:3766851 MGI:5014156 MGI:53676 MGI:53732 MGI:70833, RGD:1300046 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:9188673)
MGI:2154689 (MGI:1350441|PMID:10581026), (MGI:2151300|PMID:11668593)
PMID:21873635
RGD PMID:9188673 PMID:10581026 PMID:11668593 PMID:21873635 MGI:1350441 MGI:2151300, RGD:13792537 NCBI chr20:4,786,929...4,816,598
Ensembl chr20:4,786,929...4,815,985
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032
JBrowse link
G Col14a1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO MGI:3846440 (MGI:5444801|PMID:22906538) RGD PMID:22906538 MGI:5444801 NCBI chr 7:86,722,093...86,937,215
Ensembl chr 7:86,722,094...86,937,214
JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:14976317), (PMID:15095409), (PMID:17211858), (PMID:18375391) RGD PMID:14976317 PMID:15095409 PMID:17211858 PMID:18375391 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in ISO
IEA
(PMID:17211858), (PMID:18375391)
GO_REF:0000107
RGD
Ensembl
PMID:17211858 PMID:18375391 GO_REF:0000107 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:1429602)
MGI:1857275|MGI:2152978 (MGI:1315157|PMID:9832566), (MGI:1327515|PMID:9915573), (MGI:2664273|PMID:3070812), (MGI:3618042|PMID:11171689), (MGI:55057|PMID:7276808), (MGI:77563|PMID:7590256), (MGI:84914|PMID:8989518), (MGI:85592|PMID:9022054)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:1429602 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 More... GO_REF:0000107 MGI:1315157 MGI:1327515 MGI:2664273 MGI:3618042 MGI:55057 MGI:77563 MGI:84914 MGI:85592, RGD:13792537 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within
ISO (PMID:7546986), (PMID:9036918)
MGI:1857431|MGI:1860700 (MGI:5430873|PMID:20587693), (MGI:5605226|PMID:24820199), (MGI:6279612|PMID:29551664), (MGI:6405577|PMID:31655293)
MGI:1857431 (MGI:86656|PMID:9050868)
RGD PMID:7546986 PMID:9036918 PMID:9050868 PMID:20587693 PMID:24820199 More... MGI:5430873 MGI:5605226 MGI:6279612 MGI:6405577 MGI:86656 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Col5a1 collagen type V alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:3664598|MGI:88446 (MGI:3663234|PMID:16492673), (MGI:3664596|PMID:15383546), (MGI:3694610|PMID:17029294), (MGI:5014156|PMID:21467034)
PMID:21873635
(PMID:11278977), (PMID:15095409), (PMID:9683580)
Ensembl
RGD
PMID:9683580 PMID:11278977 PMID:15095409 PMID:15383546 PMID:16492673 More... GO_REF:0000107 MGI:3663234 MGI:3664596 MGI:3694610 MGI:5014156, RGD:13792537 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in ISO (PMID:9425231)
(MGI:3047505|PMID:15199158)
RGD PMID:9425231 PMID:15199158 MGI:3047505 NCBI chr 9:47,448,736...47,598,396
Ensembl chr 9:47,448,736...47,598,154
JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180787|MGI:5550566 (MGI:4412116|PMID:19808781), (MGI:5568656|PMID:24312420), (MGI:5922181|PMID:26746240)
Ensembl
RGD
PMID:19808781 PMID:24312420 PMID:26746240 GO_REF:0000107 MGI:4412116 MGI:5568656 MGI:5922181 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
JBrowse link
G Crtapl1 cartilage associated protein-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:114,047,929...114,067,648
Ensembl chr 8:114,047,933...114,067,631
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5544856|PMID:23979599)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23979599 GO_REF:0000024 GO_REF:0000107 MGI:5544856 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (MGI:5318020|PMID:19900459) RGD PMID:19900459 MGI:5318020 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Dpt dermatopontin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2387341 (MGI:2386368|PMID:12230512), (MGI:3655897|PMID:16877395)
RGD PMID:12230512 PMID:16877395 PMID:21873635 MGI:2386368 MGI:3655897, RGD:13792537 NCBI chr13:77,122,926...77,151,646
Ensembl chr13:77,123,115...77,151,639
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:6406768|PMID:19850926) RGD PMID:19850926 MGI:6406768 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO MGI:5432211 (MGI:5585367|PMID:24777781), (MGI:6114458|PMID:28206698) RGD PMID:24777781 PMID:28206698 MGI:5585367 MGI:6114458 NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
JBrowse link
G Fmod fibromodulin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:45,493,517...45,504,134
Ensembl chr13:45,493,517...45,504,133
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705 (MGI:1355577|PMID:10767326) RGD PMID:10767326 MGI:1355577 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (MGI:1355577|PMID:10767326) RGD PMID:10767326 MGI:1355577 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (MGI:1353150|PMID:10660670) RGD PMID:10660670 MGI:1353150 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IMP
MGI:3610732 (MGI:3604822|PMID:16192629), (MGI:5766417|PMID:26700732)
PMID:21873635
RGD PMID:16192629 PMID:26700732 PMID:16804742 PMID:21873635 PMID:16432278 MGI:3604822 MGI:5766417, RGD:1600668, RGD:13792537, RGD:1600669 NCBI chr18:45,964,311...46,041,477
Ensembl chr18:45,967,343...46,041,477
JBrowse link
G Loxl1 lysyl oxidase-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,692,592...58,716,356
Ensembl chr 8:58,692,593...58,716,356
JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(PMID:21835952)
PMID:21873635
UniProt
Ensembl
RGD
PMID:21835952 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
JBrowse link
G Loxl4 lysyl oxidase-like 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:241,396,183...241,416,385
Ensembl chr 1:241,397,983...241,416,322
JBrowse link
G Lum lumican involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:32,358,990...32,365,794
Ensembl chr 7:32,358,614...32,365,793
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO MGI:5007248 (MGI:5008683|PMID:21606205) RGD PMID:21606205 MGI:5008683 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
JBrowse link
G Mkx mohawk homeobox acts_upstream_of_or_within ISO MGI:5287572 (MGI:5287220|PMID:20696843) RGD PMID:20696843 MGI:5287220 NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO MGI:2387934 (MGI:3822602|PMID:18622425) RGD PMID:18622425 MGI:3822602 NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1857444 (MGI:1339276|PMID:10383727)
GO_REF:0000107
HGNC-UCL
RGD
Ensembl
PMID:10383727 GO_REF:0000024 GO_REF:0000107 MGI:1339276 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Optc opticin involved_in ISO
IBA
(MGI:6148629|PMID:29323130)
PMID:21873635
RGD PMID:29323130 PMID:21873635 MGI:6148629, RGD:13792537 NCBI chr13:45,353,954...45,368,254
Ensembl chr13:45,355,148...45,365,237
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within ISO MGI:4830452 (MGI:4830073|PMID:20363744) RGD PMID:20363744 MGI:4830073 NCBI chr 5:132,841,868...132,856,664
Ensembl chr 5:132,841,928...132,856,659
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5779580|PMID:27119146)
GO_REF:0000024
RGD
UniProt
PMID:27119146 PMID:21873635 GO_REF:0000024 MGI:5779580, RGD:13792537 NCBI chr10:85,338,158...85,345,108
Ensembl chr10:85,338,161...85,345,093
JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within ISO MGI:3706369 (MGI:3706231|PMID:17135260) RGD PMID:17135260 MGI:3706231 NCBI chr20:27,302,046...27,352,098
Ensembl chr20:27,302,141...27,352,786
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO MGI:3620600|MGI:3620603 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
JBrowse link
G Pxdn peroxidasin involved_in ISO (PMID:22842973) RGD PMID:22842973 NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:4413438|PMID:18802027) RGD PMID:18802027 MGI:4413438 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO (MGI:5306295|PMID:17958745) RGD PMID:17958745 MGI:5306295 NCBI chr10:60,272,400...60,280,506
Ensembl chr10:60,272,400...60,281,243
JBrowse link
G Serpinh1 serpin family H member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:2176070|MGI:2385994|MGI:5505265 (MGI:1890100|PMID:10995453), (MGI:5494537|PMID:22492985)
GO_REF:0000107
RGD
Ensembl
PMID:10995453 PMID:22492985 PMID:21873635 GO_REF:0000107 MGI:1890100 MGI:5494537, RGD:13792537 NCBI chr 1:153,643,500...153,650,853
Ensembl chr 1:153,643,510...153,650,801
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:3664776 (MGI:3839034|PMID:19079247) RGD PMID:19079247 MGI:3839034 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16891397)
AgBase
RGD
PMID:16891397 GO_REF:0000024 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:2388050 (MGI:3588906|PMID:15993878) RGD PMID:15993878 MGI:3588906 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO MGI:2181283|MGI:3053791 (MGI:2177884|PMID:11925569), (MGI:3052887|PMID:15194424) RGD PMID:11925569 PMID:15194424 MGI:2177884 MGI:3052887
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3699244|MGI:5816979 (MGI:5804716|PMID:27435297)
Ensembl
RGD
PMID:27435297 GO_REF:0000107 MGI:5804716 NCBI chr 6:106,888,284...106,913,139
Ensembl chr 6:106,888,284...106,913,117
JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated acts_upstream_of_or_within ISO MGI:3699244|MGI:5770088 (MGI:5804716|PMID:27435297) RGD PMID:27435297 MGI:5804716 NCBI chr 1:134,223,967...134,247,232
Ensembl chr 1:134,223,949...134,246,970
JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:3588774 (MGI:3616522|PMID:16338116), (MGI:54141|PMID:937819), (MGI:54357|PMID:20889), (MGI:63907|PMID:3385878) RGD PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 MGI:3616522 MGI:54141 MGI:54357 MGI:63907 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1860700 (MGI:5605226|PMID:24820199) RGD PMID:24820199 MGI:5605226 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in
acts_upstream_of_or_within
ISO (PMID:18973305), (PMID:27339457)
MGI:4410301 (MGI:4397710|PMID:19855011)
(MGI:3619755|PMID:16478991), (MGI:4947512|PMID:20019329), (MGI:5660411|PMID:26178373), (MGI:6140729|PMID:28508064), (MGI:6158865|PMID:26711913)
RGD PMID:16478991 PMID:18973305 PMID:19855011 PMID:20019329 PMID:26178373 More... MGI:3619755 MGI:4397710 MGI:4947512 MGI:5660411 MGI:6140729 MGI:6158865 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
G Eln elastin TAS RGD PMID:10090127 RGD:731206 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (MGI:5605894|PMID:25056700) RGD PMID:25056700 MGI:5605894 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Fbln5 fibulin 5 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:2681470|PMID:11805835), (MGI:2681471|PMID:11805834)
(PMID:17035250)
PMID:21873635
UniProt
RGD
PMID:11805834 PMID:11805835 PMID:17035250 PMID:21873635 GO_REF:0000024 MGI:2681470 MGI:2681471, RGD:13792537 NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within IMP
ISO
MGI:3610732 (MGI:3604822|PMID:16192629), (MGI:3609311|PMID:12417550), (MGI:5616293|PMID:23413430) RGD PMID:12417550 PMID:16192629 PMID:23413430 PMID:16432278 MGI:3604822 MGI:3609311 MGI:5616293, RGD:1600669 NCBI chr18:45,964,311...46,041,477
Ensembl chr18:45,967,343...46,041,477
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 involved_in ISO (MGI:5638486|PMID:25713297) RGD PMID:25713297 MGI:5638486 NCBI chr 1:82,600,136...82,634,346
Ensembl chr 1:82,600,136...82,632,178
JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO
IBA
(PMID:22355679)
PMID:21873635
RGD PMID:22355679 PMID:21873635 RGD:13792537 NCBI chr10:46,167,158...46,170,176
Ensembl chr10:46,167,217...46,170,155
JBrowse link
G Myh11 myosin heavy chain 11 involved_in ISO
IEA
(PMID:16444274)
GO_REF:0000107
RGD
Ensembl
PMID:16444274 GO_REF:0000107 NCBI chr10:743,364...838,459
Ensembl chr10:743,685...838,459
JBrowse link
G Thsd4 thrombospondin type 1 domain containing 4 acts_upstream_of_or_within ISO (MGI:4453293|PMID:19940141) RGD PMID:19940141 MGI:4453293 NCBI chr 8:60,384,636...60,984,419 JBrowse link
G Tnxb tenascin XB involved_in ISO (PMID:15102077) RGD PMID:15102077
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a2 collagen type I alpha 2 chain acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856327 (MGI:5468210|PMID:22910579)
GO_REF:0000107
RGD
Ensembl
PMID:22910579 GO_REF:0000107 MGI:5468210 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO (MGI:6094666|PMID:28774593) RGD PMID:28774593 MGI:6094666 NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
JBrowse link
G Gas6 growth arrest specific 6 involved_in IEP PMID:18374201 UniProt PMID:18374201 RGD:8554638 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
JBrowse link
G Gpm6b glycoprotein m6b involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21638316)
Ensembl
UniProt
RGD
PMID:21638316 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:28,057,788...28,204,409
Ensembl chr  X:28,059,450...28,204,211
JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4437572 (MGI:4437139|PMID:20181608)
Ensembl
RGD
PMID:20181608 GO_REF:0000107 MGI:4437139 NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
JBrowse link
G Has1 hyaluronan synthase 1 involved_in IBA
ISO
PMID:21873635
(MGI:5508296|PMID:10455188)
RGD PMID:10455188 PMID:21873635 MGI:5508296, RGD:13792537 NCBI chr 1:58,693,411...58,705,653
Ensembl chr 1:58,693,411...58,705,397
JBrowse link
G Has2 hyaluronan synthase 2 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5508296|PMID:10455188)
GO_REF:0000024
RGD
UniProt
PMID:10455188 PMID:21873635 GO_REF:0000024 MGI:5508296, RGD:13792537 NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
JBrowse link
G Has3 hyaluronan synthase 3 involved_in IBA
ISO
PMID:21873635
(MGI:5508296|PMID:10455188)
RGD PMID:10455188 PMID:21873635 MGI:5508296, RGD:13792537 NCBI chr19:34,768,421...34,782,170
Ensembl chr19:34,771,982...34,782,592
JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:23867277) RGD PMID:23867277 NCBI chr13:67,949,780...67,987,434
Ensembl chr13:67,949,780...67,987,459
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:5468210|PMID:22910579)
Ensembl
RGD
PMID:22910579 GO_REF:0000107 MGI:5468210 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4820704|PMID:19734317)
(PMID:19734317)
UniProt
RGD
PMID:19734317 GO_REF:0000024 MGI:4820704 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 IMP positive regulation RGD PMID:18613219 RGD:2314619 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4438316|PMID:19767743)
UniProt
RGD
PMID:19767743 GO_REF:0000024 MGI:4438316 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
JBrowse link
G Eng endoglin IMP RGD PMID:15539634 RGD:1601032 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (MGI:6141091|PMID:27188440) RGD PMID:27188440 MGI:6141091 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in ISO (MGI:6508502|PMID:23233679) RGD PMID:23233679 MGI:6508502 NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in ISO (MGI:6508502|PMID:23233679) RGD PMID:23233679 MGI:6508502 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
JBrowse link
G Capg capping actin protein, gelsolin like NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 4:104,594,743...104,611,856
Ensembl chr 4:104,594,753...104,611,856
JBrowse link
G Cma1 chymase 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233
JBrowse link
G Eng endoglin involved_in ISO (PMID:18223685) RGD PMID:18223685 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Exoc8 exocyst complex component 8 involved_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr19:52,855,010...52,857,499
Ensembl chr19:52,852,578...52,857,491
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:21119006) RGD PMID:21119006 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Gsn gelsolin NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Kif9 kinesin family member 9 involved_in ISO (PMID:21119006) RGD PMID:21119006 NCBI chr 8:110,459,467...110,504,492
Ensembl chr 8:110,459,383...110,505,252
JBrowse link
G Klk4 kallikrein-related peptidase 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4355346 (MGI:5502300|PMID:22243248)
RGD PMID:22243248 PMID:21873635 MGI:5502300, RGD:13792537 NCBI chr 1:94,344,608...94,348,979
Ensembl chr 1:94,344,195...94,349,424
JBrowse link
G Klk5 kallikrein related-peptidase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:94,296,574...94,304,768
Ensembl chr 1:94,296,168...94,304,666
JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO (PMID:15159456) RGD PMID:15159456 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr15:50,443,300...50,544,682
Ensembl chr15:50,488,149...50,544,680
JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3771509|PMID:17987127)
(PMID:8576151), (PMID:9065415)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8576151 PMID:9065415 PMID:17987127 GO_REF:0000024 GO_REF:0000107 MGI:3771509 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
JBrowse link
G Mmp20 matrix metallopeptidase 20 acts_upstream_of_or_within ISO MGI:2447874 (MGI:5502300|PMID:22243248) RGD PMID:22243248 MGI:5502300 NCBI chr 8:4,789,415...4,830,035
Ensembl chr 8:4,789,415...4,830,035
JBrowse link
G Noxo1 NADPH oxidase organizer 1 involved_in ISO (PMID:19755710) RGD PMID:19755710 NCBI chr10:13,721,473...13,726,061
Ensembl chr10:13,721,473...13,726,061
JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 acts_upstream_of_or_within ISO MGI:3665440|MGI:6363079 (MGI:6277636|PMID:30659184) RGD PMID:30659184 MGI:6277636 NCBI chr 2:174,856,339...174,868,922
Ensembl chr 2:174,856,397...174,868,919
JBrowse link
G Plg plasminogen involved_in ISO (PMID:14699093) RGD PMID:14699093 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (PMID:19755710) RGD PMID:19755710 NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
JBrowse link
G Tpsab1 tryptase alpha/beta 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr10:14,360,396...14,362,811
Ensembl chr10:14,360,396...14,362,811
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO MGI:5913851 (MGI:5906533|PMID:26247047) RGD PMID:26247047 MGI:5906533 NCBI chr 8:74,838,338...75,020,938
Ensembl chr 8:74,838,318...75,018,229
JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (MGI:5588521|PMID:23900597) RGD PMID:23900597 MGI:5588521 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 acts_upstream_of_or_within ISO MGI:3665440|MGI:6363079 (MGI:6277636|PMID:30659184) RGD PMID:30659184 MGI:6277636 NCBI chr 2:174,856,339...174,868,922
Ensembl chr 2:174,856,397...174,868,919
JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a3 collagen type IV alpha 3 chain involved_in ISO (MGI:3610934|PMID:12631063) RGD PMID:12631063 MGI:3610934 NCBI chr 9:83,875,958...84,004,955
Ensembl chr 9:83,875,561...84,001,895
JBrowse link
G Col4a4 collagen type IV alpha 4 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1857960 (MGI:1347142|PMID:10534397)
(PMID:17942953), (PMID:19675380)
RGD PMID:10534397 PMID:17942953 PMID:19675380 PMID:21873635 MGI:1347142, RGD:13792537 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:4360160|PMID:18480751) RGD PMID:18480751 MGI:4360160 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 involved_in ISO (MGI:3776221|PMID:16041630) RGD PMID:16041630 MGI:3776221 NCBI chr 6:25,221,668...25,236,241
Ensembl chr 6:25,222,896...25,236,244
JBrowse link
G Myo1e myosin IE involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4441423|PMID:19005011)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19005011 GO_REF:0000024 GO_REF:0000107 MGI:4441423 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169
JBrowse link
G Nid1 nidogen 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2682959 (MGI:2680880|PMID:14566019)
Ensembl
RGD
PMID:14566019 GO_REF:0000107 MGI:2680880 NCBI chr17:86,085,046...86,158,277
Ensembl chr17:86,085,077...86,158,267
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
IBA
GO_REF:0000107
UniProtKB:Q8CFG0 (MGI:5306737|PMID:21719793)
PMID:21873635
Ensembl
RGD
PMID:21719793 PMID:21873635 GO_REF:0000107 MGI:5306737, RGD:13792537 NCBI chr 5:6,362,896...6,526,174
Ensembl chr 5:6,362,911...6,525,584
JBrowse link
G Sulf2 sulfatase 2 involved_in IBA
ISO
PMID:21873635
UniProtKB:Q8K007 (MGI:5306737|PMID:21719793)
RGD PMID:21719793 PMID:21873635 MGI:5306737, RGD:13792537 NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415
JBrowse link
G Wt1 WT1 transcription factor involved_in ISO
ISS
(PMID:19205749)
GO_REF:0000024
RGD
UniProt
PMID:19205749 GO_REF:0000024 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2138070 (MGI:3664526|PMID:16886065), (MGI:75217|PMID:7670489)
Ensembl
RGD
PMID:7670489 PMID:16886065 GO_REF:0000107 MGI:3664526 MGI:75217 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chadl chondroadherin-like involved_in ISO (PMID:25451920) RGD PMID:25451920 NCBI chr 7:113,205,323...113,218,678
Ensembl chr 7:113,210,748...113,217,272
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (MGI:5605894|PMID:25056700) RGD PMID:25056700 MGI:5605894 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antxr1 ANTXR cell adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5754386 (MGI:5662198|PMID:25572963)
Ensembl
RGD
PMID:25572963 GO_REF:0000107 MGI:5662198 NCBI chr 4:119,590,770...119,778,232
Ensembl chr 4:119,590,771...119,778,232
JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO
IEA
(PMID:28341552)
GO_REF:0000107
RGD
Ensembl
PMID:28341552 GO_REF:0000107 NCBI chr17:22,930,012...22,993,834
Ensembl chr17:22,930,740...22,993,826
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:6158728|PMID:26491108) RGD PMID:26491108 MGI:6158728 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P25119 (MGI:6158728|PMID:26491108)
Ensembl
RGD
PMID:26491108 GO_REF:0000107 MGI:6158728 NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO UniProtKB:P25118 (MGI:6158728|PMID:26491108) RGD PMID:26491108 MGI:6158728 NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206
JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:16651416)
UniProt
RGD
PMID:16651416 GO_REF:0000024 NCBI chr 3:46,962,243...47,043,870
Ensembl chr 3:46,962,243...47,043,901
JBrowse link
G Fap fibroblast activation protein, alpha involved_in ISO (PMID:16651416) RGD PMID:16651416 NCBI chr 3:47,138,823...47,207,671
Ensembl chr 3:47,138,813...47,225,545
JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fap fibroblast activation protein, alpha involved_in ISO (PMID:10455171) RGD PMID:10455171 NCBI chr 3:47,138,823...47,207,671
Ensembl chr 3:47,138,813...47,225,545
JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO UniProtKB:Q86SQ0|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Phldb1 pleckstrin homology-like domain, family B, member 1 involved_in ISO
IEA
UniProtKB:Q7Z460|UniProtKB:Q86SQ0 (PMID:23940118)
GO_REF:0000107
RGD
Ensembl
PMID:23940118 GO_REF:0000107 NCBI chr 8:45,003,538...45,051,541
Ensembl chr 8:45,003,538...45,051,522
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO UniProtKB:Q7Z460|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 involved_in ISO (PMID:27402836) RGD PMID:27402836 NCBI chr16:18,319,796...18,332,106
Ensembl chr16:18,319,795...18,332,106
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5660411|PMID:26178373), (MGI:5695689|PMID:26220971), (MGI:6158865|PMID:26711913) RGD PMID:26178373 PMID:26220971 PMID:26711913 MGI:5660411 MGI:5695689 MGI:6158865 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:6112863|PMID:29304157)
Ensembl
RGD
PMID:29304157 GO_REF:0000107 MGI:6112863 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Tnxb tenascin XB involved_in ISO (PMID:17033827) RGD PMID:17033827
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (MGI:5605894|PMID:25056700) RGD PMID:25056700 MGI:5605894 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:21307346) RGD PMID:21307346 NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:21307346) RGD PMID:21307346 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2176205|MGI:2385468 (MGI:4848001|PMID:20881014) RGD PMID:20881014 MGI:4848001 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21419085 RGD:5129171 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:3640731|PMID:16730346)
Ensembl
RGD
PMID:16730346 GO_REF:0000107 MGI:3640731 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Cpb2 carboxypeptidase B2 IMP RGD PMID:23369837 RGD:7243115 NCBI chr15:50,557,722...50,606,569
Ensembl chr15:50,557,717...50,606,556
JBrowse link
G Hdhd2 haloacid dehalogenase-like hydrolase domain containing 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:70,475,037...70,526,471
Ensembl chr18:70,474,926...70,526,470
JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISO (PMID:33122427) RGD PMID:33122427 NCBI chr 4:132,331,372...132,342,316
Ensembl chr 4:132,332,180...132,342,316
JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19158077) RGD PMID:19158077 NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in ISO (PMID:26466680), (PMID:26578515) RGD PMID:26466680 PMID:26578515 NCBI chr19:33,571,255...33,586,783
Ensembl chr19:33,574,257...33,586,965
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (MGI:2158097|PMID:11723120) RGD PMID:11723120 MGI:2158097 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20137952)
Ensembl
UniProt
RGD
PMID:20137952 GO_REF:0000024 GO_REF:0000107 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:26587789) RGD PMID:26587789 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Meltf melanotransferrin involved_in ISO (PMID:16713448) RGD PMID:16713448 NCBI chr11:68,884,446...68,906,300
Ensembl chr11:68,884,446...68,906,300
JBrowse link
G Pdpn podoplanin involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:25486435)
UniProt
RGD
PMID:25486435 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:5688835|PMID:21984612) RGD PMID:21984612 MGI:5688835 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase IMP RGD PMID:19846571 RGD:8693597 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:24691542 RGD:11341715 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 IMP RGD PMID:29656108 RGD:150520032 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO (MGI:6112863|PMID:29304157) RGD PMID:29304157 MGI:6112863 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp1 AE binding protein 1 involved_in ISO
IEA
ISS
(PMID:29606302)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:29606302 GO_REF:0000024 GO_REF:0000107 NCBI chr14:80,738,800...80,748,878
Ensembl chr14:80,738,892...80,748,877
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5776647|PMID:26690653) RGD PMID:26690653 MGI:5776647 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO UniProtKB:P00797 (PMID:17416596) RGD PMID:17416596 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Has2 hyaluronan synthase 2 IMP RGD PMID:27094859 RGD:12910548 NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5298073|PMID:21311046) RGD PMID:21311046 MGI:5298073 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 acts_upstream_of ISO (MGI:6370101|PMID:31319059) RGD PMID:31319059 MGI:6370101 NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592
JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:31932796) RGD PMID:31932796 NCBI chr 1:227,285,510...227,384,553
Ensembl chr 1:227,285,210...227,382,863
JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in ISO
IEA
ISS
(PMID:12065315)
GO_REF:0000107
(MGI:3629583|PMID:12065315)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12065315 GO_REF:0000024 GO_REF:0000107 MGI:3629583 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IMP RGD PMID:16738537 RGD:2313717 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:20876804)
UniProt
RGD
PMID:20876804 GO_REF:0000024 NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (MGI:4840122|PMID:20980600) RGD PMID:20980600 MGI:4840122 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (MGI:4840122|PMID:20980600) RGD PMID:20980600 MGI:4840122 NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
JBrowse link
G Angptl7 angiopoietin like 7 involved_in ISO (PMID:21199193) RGD PMID:21199193 NCBI chr 5:158,932,094...158,937,597
Ensembl chr 5:158,932,794...158,937,324
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within ISO MGI:2175913 (MGI:5462513|PMID:22984613) RGD PMID:22984613 MGI:5462513 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO MGI:3703328 (MGI:3702795|PMID:16943282) RGD PMID:16943282 MGI:3702795 NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
JBrowse link
G Prdm5 PR/SET domain 5 involved_in ISO (PMID:21664999) RGD PMID:21664999 NCBI chr 4:95,075,736...95,237,921
Ensembl chr 4:95,075,768...95,238,301
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:26376865) RGD PMID:26376865 NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:5522599|PMID:24038871) RGD PMID:24038871 MGI:5522599 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:1888389 (MGI:5140242|PMID:21780244) RGD PMID:21780244 MGI:5140242 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Zfp469 zinc finger protein 469 involved_in ISO (PMID:21664999) RGD PMID:21664999 NCBI chr19:50,282,434...50,324,010 JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (MGI:3766861|PMID:17881493) RGD PMID:17881493 MGI:3766861 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link

Term paths to the root