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ONTOLOGY REPORT - ANNOTATIONS

Term:basement membrane assembly
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Accession:GO:0070831 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue.
Comment:Note that this term has no relationship to 'membrane assembly ; GO:0071709' because the basement membrane is not a lipid bilayer.


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basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:53,562,849...53,630,118
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamb2 laminin subunit beta 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:118,056,899...118,069,090
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Lamb3 laminin subunit beta 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:107,362,514...107,404,081
Ensembl chr13:104,833,873...104,875,405 		JBrowse link
G Megf9 multiple EGF-like-domains 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:89,008,679...89,120,731
Ensembl chr 5:83,993,565...84,105,622 		JBrowse link
G Ntn4 netrin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:30,073,637...30,187,407
Ensembl chr 7:28,186,611...28,300,390 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO
IEA		 MGI:3620600|MGI:3620601|MGI:3620603 (PMID:16467571)
GO_REF:0000107		 RGD
Ensembl		 PMID:16467571 GO_REF:0000107 NCBI chr12:25,313,070...25,323,631
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
G Pxdn peroxidasin involved_in
acts_upstream_of		 ISO
IEA		 (PMID:25708780), (PMID:27697841), (PMID:32571911)
(PMID:32543734)
(PMID:22842973), (PMID:25708780), (PMID:32571911)
GO_REF:0000107		 RGD
Ensembl		 PMID:22842973 PMID:25708780 PMID:27697841 PMID:32543734 PMID:32571911 GO_REF:0000107 NCBI chr 6:52,308,347...52,385,943
Ensembl chr 6:46,580,761...46,658,345 		JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18097473)		 UniProt
RGD		 PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956
Ensembl chr10:86,188,812...86,231,829 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      cellular component organization or biogenesis 7104
        cellular component organization 6817
          cellular component assembly 3214
            extracellular matrix assembly 54
              basement membrane assembly 8
                basement membrane assembly involved in embryonic body morphogenesis + 0
Path 2
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      cellular component organization or biogenesis 7104
        cellular component organization 6817
          extracellular structure organization 325
            extracellular matrix organization 324
              extracellular matrix assembly 54
                basement membrane assembly 8
                  basement membrane assembly involved in embryonic body morphogenesis + 0
paths to the root