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ONTOLOGY REPORT - ANNOTATIONS

Term:extracellular structure organization
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Accession:GO:0043062 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.
Synonyms:exact_synonym: extracellular structure organisation;   extracellular structure organization and biogenesis


show annotations for term's descendants           Sort by:
basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:53,562,849...53,630,118
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamb2 laminin subunit beta 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:118,056,899...118,069,090
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Lamb3 laminin subunit beta 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:107,362,514...107,404,081
Ensembl chr13:104,833,873...104,875,405 		JBrowse link
G Megf9 multiple EGF-like-domains 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:89,008,679...89,120,731
Ensembl chr 5:83,993,565...84,105,622 		JBrowse link
G Ntn4 netrin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:30,073,637...30,187,407
Ensembl chr 7:28,186,611...28,300,390 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO
IEA		 MGI:3620600|MGI:3620601|MGI:3620603 (PMID:16467571)
GO_REF:0000107		 RGD
Ensembl		 PMID:16467571 GO_REF:0000107 NCBI chr12:25,313,070...25,323,631
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
G Pxdn peroxidasin involved_in
acts_upstream_of		 ISO
IEA		 (PMID:25708780), (PMID:27697841), (PMID:32571911)
GO_REF:0000107
(PMID:22842973), (PMID:25708780), (PMID:32571911)
(PMID:32543734)		 RGD
Ensembl		 PMID:22842973 PMID:25708780 PMID:27697841 PMID:32543734 PMID:32571911 GO_REF:0000107 NCBI chr 6:52,308,347...52,385,943
Ensembl chr 6:46,580,761...46,658,345 		JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18097473)		 UniProt
RGD		 PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956
Ensembl chr10:86,188,812...86,231,829 		JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cma1 chymase 1 involved_in ISO
IEA		 (PMID:27068509)
GO_REF:0000107		 RGD
Ensembl		 PMID:27068509 GO_REF:0000107 NCBI chr15:33,387,351...33,390,133
Ensembl chr15:29,417,451...29,420,233 		JBrowse link
G Ctss cathepsin S involved_in ISO (PMID:22952693) RGD PMID:22952693 NCBI chr 2:185,775,316...185,803,440
Ensembl chr 2:183,086,437...183,114,483 		JBrowse link
G Hpn hepsin involved_in ISO
IEA
ISS		 (PMID:16908524)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:16908524 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:95,464,468...95,480,169
Ensembl chr 1:86,337,087...86,352,811 		JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 acts_upstream_of_or_within ISO
IEA		 MGI:2180364 (PMID:11884617)
GO_REF:0000107		 RGD
Ensembl		 PMID:11884617 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Cav2 caveolin 2 acts_upstream_of_or_within ISO
IEA		 MGI:2180372 (PMID:11884617)
GO_REF:0000107		 RGD
Ensembl		 PMID:11884617 GO_REF:0000107 NCBI chr 4:46,582,681...46,590,058
Ensembl chr 4:45,616,712...45,624,244 		JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO UniProtKB:Q86SQ0|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr13:32,046,362...32,267,954
Ensembl chr13:29,493,596...29,715,146 		JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:122,555,532...122,736,934
Ensembl chr 8:113,677,284...113,858,731 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:22235340) RGD PMID:22235340 NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO
IEA		 (PMID:18160688), (PMID:19949034), (PMID:23065703)
GO_REF:0000107		 RGD
Ensembl		 PMID:18160688 PMID:19949034 PMID:23065703 GO_REF:0000107 NCBI chr16:84,885,597...84,996,482
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:2153356 (PMID:25158062)
GO_REF:0000107		 RGD
Ensembl		 PMID:25158062 GO_REF:0000107 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1934902 (PMID:23217742)
(PMID:23940118)
GO_REF:0000107		 RGD
Ensembl		 PMID:23217742 PMID:23940118 GO_REF:0000107 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:26024086)
GO_REF:0000107		 RGD
Ensembl		 PMID:26024086 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO
IEA		 (PMID:24681597)
GO_REF:0000107		 RGD
Ensembl		 PMID:24681597 GO_REF:0000107 NCBI chr 3:140,624,434...140,666,419
Ensembl chr 3:120,171,561...120,213,555 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4835411 (PMID:28039900) RGD PMID:28039900 NCBI chr 1:86,607,769...86,615,045
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:73,134,746...73,191,772
Ensembl chr 5:68,340,028...68,396,409 		JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21350012)		 UniProt
RGD		 PMID:21350012 GO_REF:0000024 NCBI chr 6:120,507,998...120,603,133
Ensembl chr 6:114,777,599...114,872,785 		JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO
IEA		 MGI:2384087 (PMID:9811848)
GO_REF:0000107		 RGD
Ensembl		 PMID:9811848 GO_REF:0000107 NCBI chr 6:10,952,329...11,160,288
Ensembl chr 6:5,198,825...5,406,785 		JBrowse link
G Gas2 growth arrest-specific 2 acts_upstream_of_or_within ISO MGI:6187669 (PMID:27734842) RGD PMID:27734842 NCBI chr 1:110,587,952...110,721,572
Ensembl chr 1:101,482,591...101,582,619 		JBrowse link
G Hmcn1 hemicentin 1 involved_in ISO
IEA		 (PMID:34504132)
GO_REF:0000107		 RGD
Ensembl		 PMID:34504132 GO_REF:0000107 NCBI chr13:65,165,532...65,634,681
Ensembl chr13:62,615,461...63,084,524 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:24681597) RGD PMID:24681597 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO
IEA		 MGI:1856965 (PMID:12140558), (PMID:21970971)
GO_REF:0000107		 RGD
Ensembl		 PMID:12140558 PMID:21970971 GO_REF:0000107 NCBI chr19:11,609,004...12,057,174
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO
IEA		 MGI:2387934 (PMID:18622425)
GO_REF:0000107		 RGD
Ensembl		 PMID:18622425 GO_REF:0000107 NCBI chr20:12,730,284...12,739,067
Ensembl chr20:12,730,836...12,739,628 		JBrowse link
G Phldb1 pleckstrin homology-like domain, family B, member 1 involved_in ISO UniProtKB:Q7Z460|UniProtKB:Q86SQ0 (PMID:23940118) RGD PMID:23940118 NCBI chr 8:53,900,338...53,948,325
Ensembl chr 8:45,003,538...45,051,522 		JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q7Z460|UniProtKB:Q86UU1 (PMID:23940118)		 Ensembl
RGD		 PMID:23940118 GO_REF:0000107 NCBI chr11:68,321,738...68,540,724
Ensembl chr11:54,859,135...55,078,467 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (PMID:16436605) RGD PMID:16436605 NCBI chr10:48,294,932...48,324,941
Ensembl chr10:47,795,709...47,825,714 		JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within ISO
IEA		 MGI:3623521 (PMID:21970971)
GO_REF:0000107		 RGD
Ensembl		 PMID:21970971 GO_REF:0000107 NCBI chr 5:134,870,971...134,880,864
Ensembl chr 5:129,634,294...129,644,149 		JBrowse link
G Pomt2 protein-O-mannosyltransferase 2 acts_upstream_of_or_within ISO
IEA		 MGI:5302103 (PMID:21970971)
GO_REF:0000107		 RGD
Ensembl		 PMID:21970971 GO_REF:0000107 NCBI chr 6:112,486,416...112,525,799
Ensembl chr 6:106,755,462...106,794,849 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:5645931 (PMID:33144400)		 Ensembl
RGD		 PMID:33144400 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Pxdn peroxidasin involved_in ISO
IEA		 (PMID:24895407), (PMID:28424209)
GO_REF:0000107		 RGD
Ensembl		 PMID:24895407 PMID:28424209 GO_REF:0000107 NCBI chr 6:52,308,347...52,385,943
Ensembl chr 6:46,580,761...46,658,345 		JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within ISO MGI:3608888 (PMID:21069829) RGD PMID:21069829 NCBI chr 1:205,364,796...205,371,102
Ensembl chr 1:195,935,349...195,941,467 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:2156187 (PMID:19592578) RGD PMID:19592578 NCBI chr 1:93,685,637...93,708,091
Ensembl chr 1:84,558,166...84,580,616 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2183192 (PMID:16186342) RGD PMID:16186342 NCBI chr17:24,230,064...24,253,219
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
biofilm matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G involved_in ISO
IEA
ISS		 (PMID:32995850)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:32995850 GO_REF:0000024 GO_REF:0000107 NCBI chr15:33,901,230...33,907,596
Ensembl chr15:29,931,003...29,937,353 		JBrowse link
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan acts_upstream_of_or_within ISO
IEA		 MGI:1856465 (PMID:3070812)
GO_REF:0000107		 RGD
Ensembl		 PMID:3070812 GO_REF:0000107 NCBI chr 1:142,390,951...142,453,779
Ensembl chr 1:132,981,582...133,043,627 		JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO
IEA		 MGI:1347346|MGI:2146046 (PMID:29618652)
GO_REF:0000107		 RGD
Ensembl		 PMID:29618652 GO_REF:0000107 NCBI chr 2:61,759,975...62,054,716
Ensembl chr 2:60,032,873...60,327,629 		JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 acts_upstream_of_or_within ISO
IEA		 (PMID:11741898)
GO_REF:0000107		 RGD
Ensembl		 PMID:11741898 GO_REF:0000107 NCBI chr20:29,685,876...29,762,685
Ensembl chr20:29,144,354...29,219,866 		JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 involved_in ISO
IEA		 (PMID:31844321)
GO_REF:0000107		 RGD
Ensembl		 PMID:31844321 GO_REF:0000107 NCBI chr18:54,545,357...54,729,184
Ensembl chr18:52,347,428...52,530,509 		JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 acts_upstream_of_or_within ISO
IEA		 MGI:2388161 (PMID:16556917)
GO_REF:0000107		 RGD
Ensembl		 PMID:16556917 GO_REF:0000107 NCBI chr10:35,422,030...35,627,483
Ensembl chr10:34,921,049...35,123,821 		JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:1347346|MGI:2146046 (PMID:29618652) RGD PMID:29618652 NCBI chr 8:99,584,529...99,624,132
Ensembl chr 8:90,704,727...90,744,328 		JBrowse link
G Antxr2 ANTXR cell adhesion molecule 2 acts_upstream_of_or_within ISO
IEA		 MGI:1919164 (PMID:28604699)
GO_REF:0000107		 RGD
Ensembl		 PMID:28604699 GO_REF:0000107 NCBI chr14:11,845,774...11,986,166
Ensembl chr14:11,541,772...11,682,094 		JBrowse link
G Anxa2 annexin A2 acts_upstream_of_or_within ISO MGI:3028929 (PMID:14702107) RGD PMID:14702107 NCBI chr 8:78,986,252...79,022,638
Ensembl chr 8:70,105,253...70,141,658 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:1856101|MGI:1856102|MGI:3588774 (PMID:16338116), (PMID:20889), (PMID:4808708), (PMID:8096378), (PMID:8895222) RGD PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within TAS
ISO		 MGI:1856399|MGI:88457 (PMID:17029294), (PMID:17683922), (PMID:21467034), (PMID:3070812), (PMID:4100752), (PMID:4110409), (PMID:7859283) RGD PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 More... RGD:1300046 NCBI chr 2:204,509,136...204,702,264
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:9188673)
MGI:2154689 (PMID:10581026), (PMID:11668593)
GO_REF:0000033		 RGD
GO_Central		 PMID:9188673 PMID:10581026 PMID:11668593 GO_REF:0000033 NCBI chr20:4,788,829...4,818,492
Ensembl chr20:4,786,929...4,815,985 		JBrowse link
G Col14a1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:3846440 (PMID:22906538)
GO_REF:0000107		 RGD
Ensembl		 PMID:22906538 GO_REF:0000107 NCBI chr 7:88,611,827...88,826,939
Ensembl chr 7:86,722,094...86,937,214 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO
IEA		 (PMID:14976317), (PMID:15095409), (PMID:17211858), (PMID:18375391)
GO_REF:0000107		 RGD
Ensembl		 PMID:14976317 PMID:15095409 PMID:17211858 PMID:18375391 GO_REF:0000107 NCBI chr10:80,380,458...80,397,461
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in ISO (PMID:17211858), (PMID:18375391) RGD PMID:17211858 PMID:18375391 NCBI chr 4:33,518,557...33,553,484
Ensembl chr 4:32,563,381...32,598,867 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:1429602)
GO_REF:0000107
MGI:1857275|MGI:2152978 (PMID:11171689), (PMID:3070812), (PMID:7276808), (PMID:7590256), (PMID:8989518), (PMID:9022054), (PMID:9832566), (PMID:9915573)		 RGD
Ensembl		 PMID:1429602 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 More... GO_REF:0000107 NCBI chr 7:130,977,561...131,006,627
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within		 ISO (PMID:7546986), (PMID:9036918)
MGI:1857431 (PMID:9050868)
MGI:1857431|MGI:1860700 (PMID:20587693), (PMID:24820199), (PMID:29551664), (PMID:31655293)		 RGD PMID:7546986 PMID:9036918 PMID:9050868 PMID:20587693 PMID:24820199 More... NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col5a1 collagen type V alpha 1 chain involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:11278977), (PMID:15095409), (PMID:9683580)
GO_REF:0000033
MGI:3664598|MGI:88446 (PMID:15383546), (PMID:16492673), (PMID:17029294), (PMID:21467034)		 RGD
GO_Central		 PMID:9683580 PMID:11278977 PMID:15095409 PMID:15383546 PMID:16492673 More... GO_REF:0000033 NCBI chr 3:31,606,475...31,755,097
Ensembl chr 3:11,208,512...11,354,588 		JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in ISO (PMID:9425231)
(PMID:15199158)		 RGD PMID:9425231 PMID:15199158 NCBI chr 9:54,940,768...55,090,151
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:2153356|MGI:88459 (PMID:25158062), (PMID:28604699)
GO_REF:0000107		 RGD
Ensembl		 PMID:25158062 PMID:28604699 GO_REF:0000107 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within ISO
IEA		 MGI:2180787|MGI:5550566 (PMID:19808781), (PMID:24312420), (PMID:26746240)
GO_REF:0000107		 RGD
Ensembl		 PMID:19808781 PMID:24312420 PMID:26746240 GO_REF:0000107 NCBI chr16:19,081,172...19,089,548
Ensembl chr16:19,047,207...19,055,845 		JBrowse link
G Crtap cartilage associated protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:122,926,117...122,945,843
Ensembl chr 8:114,047,933...114,067,631 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:23979599)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23979599 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO
IEA		 (PMID:19900459)
GO_REF:0000107		 RGD
Ensembl		 PMID:19900459 GO_REF:0000107 NCBI chr13:84,726,412...84,851,032
Ensembl chr13:82,195,463...82,317,363 		JBrowse link
G Dpt dermatopontin involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:2387341 (PMID:12230512), (PMID:16877395)		 GO_Central
Ensembl
RGD		 PMID:12230512 PMID:16877395 GO_REF:0000033 GO_REF:0000107 NCBI chr13:79,656,341...79,684,759
Ensembl chr13:77,123,115...77,151,639 		JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO
IEA		 (PMID:28106121)
GO_REF:0000107		 RGD
Ensembl		 PMID:28106121 GO_REF:0000107 NCBI chr15:20,974,771...21,010,170
Ensembl chr15:18,492,945...18,530,478 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:19850926)
GO_REF:0000107		 RGD
Ensembl		 PMID:19850926 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO
IEA		 MGI:5432211 (PMID:24777781), (PMID:28206698)
GO_REF:0000107		 RGD
Ensembl		 PMID:24777781 PMID:28206698 GO_REF:0000107 NCBI chr10:85,845,801...85,858,361
Ensembl chr10:85,346,126...85,427,330 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO
IEA		 MGI:1856705 (PMID:10767326)
GO_REF:0000107		 RGD
Ensembl		 PMID:10767326 GO_REF:0000107 NCBI chr17:32,840,119...32,844,100
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (PMID:10767326) RGD PMID:10767326 NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (PMID:10660670) RGD PMID:10660670 NCBI chr 3:37,257,025...37,338,675
Ensembl chr 3:16,862,195...16,940,899 		JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within
involved_in		 IDA
IEA
ISO
IBA
IMP		 GO_REF:0000107
(PMID:26700732)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:26700732 PMID:16804742 PMID:16432278 GO_REF:0000033 GO_REF:0000107, RGD:1600668, RGD:1600669 NCBI chr18:48,162,889...48,175,640
Ensembl chr18:45,967,343...46,041,477 		JBrowse link
G Loxl1 lysyl oxidase-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:67,587,636...67,612,224
Ensembl chr 8:58,692,593...58,716,356 		JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:21835952)		 UniProt
GO_Central
Ensembl
RGD		 PMID:21835952 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr15:51,091,547...51,182,843
Ensembl chr15:44,683,880...44,773,067 		JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,098,358...117,114,673
Ensembl chr 4:115,540,685...115,557,466 		JBrowse link
G Loxl4 lysyl oxidase-like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:251,345,445...251,365,640
Ensembl chr 1:241,397,983...241,416,322 		JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO MGI:5007248 (PMID:21606205) RGD PMID:21606205 NCBI chr13:97,502,040...97,547,155
Ensembl chr13:94,970,424...95,011,972 		JBrowse link
G Mkx mohawk homeobox acts_upstream_of_or_within ISO MGI:5287572 (PMID:20696843) RGD PMID:20696843 NCBI chr17:59,772,113...59,851,160
Ensembl chr17:55,077,540...55,156,124 		JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO
IEA		 MGI:2387934 (PMID:18622425)
GO_REF:0000107		 RGD
Ensembl		 PMID:18622425 GO_REF:0000107 NCBI chr20:12,730,284...12,739,067
Ensembl chr20:12,730,836...12,739,628 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:1857444 (PMID:10383727)		 HGNC-UCL
Ensembl
RGD		 PMID:10383727 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Optc opticin involved_in IBA
ISO		 GO_REF:0000033
(PMID:29323130)		 GO_Central
RGD		 PMID:29323130 GO_REF:0000033 NCBI chr13:47,906,145...47,920,334
Ensembl chr13:45,355,148...45,365,237 		JBrowse link
G P3h1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within ISO
IEA		 MGI:4830452 (PMID:20363744)
GO_REF:0000107		 RGD
Ensembl		 PMID:20363744 GO_REF:0000107 NCBI chr 5:138,127,240...138,141,974
Ensembl chr 5:132,841,928...132,856,659 		JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:27119146)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:27119146 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:85,838,528...85,845,476
Ensembl chr10:85,338,161...85,345,093 		JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 MGI:3706369 (PMID:17135260)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:17135260 GO_REF:0000033 GO_REF:0000107 NCBI chr20:27,784,696...27,895,785
Ensembl chr20:27,302,141...27,352,786 		JBrowse link
G P4ha3 prolyl 4-hydroxylase subunit alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:164,040,852...164,075,922
Ensembl chr 1:154,628,736...154,663,775 		JBrowse link
G Plod1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:163,623,847...163,650,737
Ensembl chr 5:158,340,490...158,367,620 		JBrowse link
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:101,964,318...102,047,022
Ensembl chr 8:93,084,513...93,167,255 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 MGI:3620600|MGI:3620603 (PMID:16467571)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16467571 GO_REF:0000033 GO_REF:0000107 NCBI chr12:25,313,070...25,323,631
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
G Pxdn peroxidasin involved_in ISO
IEA		 (PMID:22842973)
GO_REF:0000107		 RGD
Ensembl		 PMID:22842973 GO_REF:0000107 NCBI chr 6:52,308,347...52,385,943
Ensembl chr 6:46,580,761...46,658,345 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (PMID:18802027) RGD PMID:18802027 NCBI chr 7:110,056,897...110,059,283
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO
IEA		 (PMID:28106121)
GO_REF:0000107		 RGD
Ensembl		 PMID:28106121 GO_REF:0000107 NCBI chr 5:152,032,330...152,046,707
Ensembl chr 5:146,748,652...146,763,059 		JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO (PMID:17958745) RGD PMID:17958745 NCBI chr10:60,770,698...60,778,782
Ensembl chr10:60,272,400...60,281,243 		JBrowse link
G Serpinh1 serpin family H member 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:2176070|MGI:2385994|MGI:5505265 (PMID:10995453), (PMID:22492985)		 GO_Central
Ensembl
RGD		 PMID:10995453 PMID:22492985 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:163,055,630...163,063,177
Ensembl chr 1:153,643,510...153,650,801 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:3664776 (PMID:19079247)
GO_REF:0000107		 RGD
Ensembl		 PMID:19079247 GO_REF:0000107 NCBI chr 2:171,387,536...171,395,081
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16891397)		 AgBase
Ensembl
RGD		 PMID:16891397 GO_REF:0000024 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO
IEA		 MGI:2388050 (PMID:15993878)
GO_REF:0000107		 RGD
Ensembl		 PMID:15993878 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO
IEA		 MGI:2181283|MGI:3053791 (PMID:11925569), (PMID:15194424)
GO_REF:0000107		 RGD
Ensembl		 PMID:11925569 PMID:15194424 GO_REF:0000107
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog acts_upstream_of_or_within ISO
IEA		 MGI:3699244|MGI:5816979 (PMID:27435297)
GO_REF:0000107		 RGD
Ensembl		 PMID:27435297 GO_REF:0000107 NCBI chr 6:112,619,228...112,644,089
Ensembl chr 6:106,888,284...106,913,117 		JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated acts_upstream_of_or_within ISO
IEA		 MGI:3699244|MGI:5770088 (PMID:27435297)
GO_REF:0000107		 RGD
Ensembl		 PMID:27435297 GO_REF:0000107 NCBI chr 1:143,633,167...143,656,228
Ensembl chr 1:134,223,949...134,246,970 		JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within ISO MGI:6765940 (PMID:34368841) RGD PMID:34368841 NCBI chr19:67,190,901...67,232,569 JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:3588774 (PMID:16338116), (PMID:20889), (PMID:3385878), (PMID:937819) RGD PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1860700 (PMID:24820199) RGD PMID:24820199 NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:18973305), (PMID:27339457)
GO_REF:0000107
(PMID:16478991), (PMID:20019329), (PMID:26178373), (PMID:26711913), (PMID:28508064)
MGI:4410301 (PMID:19855011)		 RGD
Ensembl		 PMID:16478991 PMID:18973305 PMID:19855011 PMID:20019329 PMID:26178373 More... GO_REF:0000107 NCBI chr 1:212,211,057...212,218,739
Ensembl chr 1:202,781,665...202,789,414 		JBrowse link
G Eln elastin TAS RGD PMID:10090127 RGD:731206 NCBI chr12:27,604,983...27,648,413
Ensembl chr12:21,968,544...22,011,928 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO
IEA		 (PMID:25056700)
GO_REF:0000107		 RGD
Ensembl		 PMID:25056700 GO_REF:0000107 NCBI chr 6:31,175,919...31,183,657
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
G Fbln5 fibulin 5 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:11805834), (PMID:11805835)
GO_REF:0000033
(PMID:17035250)		 UniProt
Ensembl
RGD
GO_Central		 PMID:11805834 PMID:11805835 PMID:17035250 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:126,664,100...126,742,847
Ensembl chr 6:120,899,224...120,977,755 		JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within IMP
IEA
ISO		 GO_REF:0000107
MGI:3610732 (PMID:12417550), (PMID:16192629), (PMID:23413430)		 Ensembl
RGD		 PMID:12417550 PMID:16192629 PMID:23413430 PMID:16432278 GO_REF:0000107, RGD:1600669 NCBI chr18:48,162,889...48,175,640
Ensembl chr18:45,967,343...46,041,477 		JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 involved_in ISO (PMID:25713297) RGD PMID:25713297 NCBI chr 1:91,727,769...91,759,822
Ensembl chr 1:82,600,136...82,632,178 		JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO
IEA
IBA		 (PMID:22355679)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:22355679 GO_REF:0000033 GO_REF:0000107 NCBI chr10:46,666,552...46,669,613
Ensembl chr10:46,167,217...46,170,155 		JBrowse link
G Myh11 myosin heavy chain 11 involved_in ISO
IEA		 (PMID:16444274)
GO_REF:0000107		 RGD
Ensembl		 PMID:16444274 GO_REF:0000107 NCBI chr10:1,250,554...1,345,681
Ensembl chr10:743,685...838,459 		JBrowse link
G Thsd4 thrombospondin type 1 domain containing 4 acts_upstream_of_or_within ISO
IEA		 (PMID:19940141)
GO_REF:0000107		 RGD
Ensembl		 PMID:19940141 GO_REF:0000107 NCBI chr 8:69,280,397...69,880,144
Ensembl chr 8:60,386,875...61,024,995 		JBrowse link
G Tnxb tenascin XB involved_in ISO
IEA		 (PMID:15102077)
GO_REF:0000107		 RGD
Ensembl		 PMID:15102077 GO_REF:0000107
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a2 collagen type I alpha 2 chain acts_upstream_of_or_within ISO MGI:1856327 (PMID:22910579) RGD PMID:22910579 NCBI chr 4:33,518,557...33,553,484
Ensembl chr 4:32,563,381...32,598,867 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:2153356 (PMID:19114551)
GO_REF:0000107		 RGD
Ensembl		 PMID:19114551 GO_REF:0000107 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Eln elastin involved_in IEA
ISO		 GO_REF:0000107
(PMID:20576933)		 Ensembl
RGD		 PMID:20576933 GO_REF:0000107 NCBI chr12:27,604,983...27,648,413
Ensembl chr12:21,968,544...22,011,928 		JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO
IEA		 (PMID:28774593)
GO_REF:0000107		 RGD
Ensembl		 PMID:28774593 GO_REF:0000107 NCBI chr10:85,845,801...85,858,361
Ensembl chr10:85,346,126...85,427,330 		JBrowse link
G Gas6 growth arrest specific 6 involved_in IEP PMID:18374201 UniProt PMID:18374201 RGD:8554638 NCBI chr16:82,747,676...82,778,090
Ensembl chr16:76,045,426...76,075,904 		JBrowse link
G Gpm6b glycoprotein m6b involved_in ISO
IEA
ISS		 (PMID:21638316)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:21638316 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:31,689,485...31,836,199
Ensembl chr  X:28,059,450...28,204,211 		JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 acts_upstream_of_or_within ISO MGI:4437572 (PMID:20181608) RGD PMID:20181608 NCBI chr 2:175,786,767...175,794,515
Ensembl chr 2:173,491,160...173,496,588 		JBrowse link
G Has1 hyaluronan synthase 1 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:10455188)		 GO_Central
Ensembl
RGD		 PMID:10455188 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:67,366,460...67,378,686
Ensembl chr 1:58,693,411...58,705,397 		JBrowse link
G Has2 hyaluronan synthase 2 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:10455188)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:10455188 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:90,002,929...90,028,933
Ensembl chr 7:88,113,326...88,128,933 		JBrowse link
G Has3 hyaluronan synthase 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:10455188)		 GO_Central
RGD		 PMID:10455188 GO_REF:0000033 NCBI chr19:51,668,276...51,691,042
Ensembl chr19:34,771,982...34,782,592 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:4356107 (PMID:19706528)		 Ensembl
RGD		 PMID:19706528 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO
IEA		 (PMID:23867277)
GO_REF:0000107		 RGD
Ensembl		 PMID:23867277 GO_REF:0000107 NCBI chr13:70,500,060...70,537,711
Ensembl chr13:67,949,780...67,987,459 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO
IEA		 MGI:1856877 (PMID:22910579)
GO_REF:0000107		 RGD
Ensembl		 PMID:22910579 GO_REF:0000107 NCBI chr19:51,072,209...51,155,639
Ensembl chr19:34,162,341...34,245,749 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of ISO
IEA		 MGI:2176205|MGI:2385468 (PMID:20881014)
GO_REF:0000107		 RGD
Ensembl		 PMID:20881014 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19734317)		 UniProt
Ensembl
RGD		 PMID:19734317 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 IMP positive regulation RGD PMID:18613219 RGD:2314619 NCBI chr 1:22,621,498...22,624,614
Ensembl chr 1:20,802,199...20,805,734 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19767743)		 UniProt
RGD		 PMID:19767743 GO_REF:0000024 NCBI chr 3:98,408,240...98,449,104
Ensembl chr 3:77,952,540...77,993,456 		JBrowse link
G Eng endoglin IMP RGD PMID:15539634 RGD:1601032 NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO
IEA		 MGI:1921416 (PMID:27188440)
GO_REF:0000107		 RGD
Ensembl		 PMID:27188440 GO_REF:0000107 NCBI chr 5:73,255,662...73,291,383
Ensembl chr 5:68,460,304...68,496,025 		JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within ISO MGI:6765940 (PMID:34368841) RGD PMID:34368841 NCBI chr19:67,190,901...67,232,569 JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in ISO
IEA		 (PMID:23233679)
GO_REF:0000107		 RGD
Ensembl		 PMID:23233679 GO_REF:0000107 NCBI chr 8:37,566,064...37,589,446
Ensembl chr 8:29,307,865...29,331,249 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in ISO
IEA		 (PMID:23233679)
GO_REF:0000107		 RGD
Ensembl		 PMID:23233679 GO_REF:0000107 NCBI chr11:38,486,945...38,533,516
Ensembl chr11:25,000,637...25,047,205 		JBrowse link
G Capg capping actin protein, gelsolin like NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 4:106,152,912...106,170,010
Ensembl chr 4:104,594,753...104,611,856 		JBrowse link
G Cma1 chymase 1 involved_in ISO
IEA		 (PMID:27068509)
GO_REF:0000107		 RGD
Ensembl		 PMID:27068509 GO_REF:0000107 NCBI chr15:33,387,351...33,390,133
Ensembl chr15:29,417,451...29,420,233 		JBrowse link
G Eng endoglin involved_in ISO (PMID:18223685) RGD PMID:18223685 NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230 		JBrowse link
G Exoc8 exocyst complex component 8 involved_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr19:69,752,387...69,754,876
Ensembl chr19:52,852,578...52,857,491 		JBrowse link
G Flot1 flotillin 1 involved_in ISO
IEA		 (PMID:21119006)
GO_REF:0000107		 RGD
Ensembl		 PMID:21119006 GO_REF:0000107 NCBI chr20:2,922,662...2,932,906
Ensembl chr20:2,917,137...2,927,978 		JBrowse link
G Gsn gelsolin NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 3:38,982,605...39,035,849
Ensembl chr 3:18,585,172...18,638,402 		JBrowse link
G Kif9 kinesin family member 9 involved_in ISO
IEA		 (PMID:21119006)
GO_REF:0000107		 RGD
Ensembl		 PMID:21119006 GO_REF:0000107 NCBI chr 8:119,338,014...119,406,632
Ensembl chr 8:110,459,383...110,505,252 		JBrowse link
G Klk4 kallikrein-related peptidase 4 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:4355346 (PMID:22243248)		 GO_Central
Ensembl
RGD		 PMID:22243248 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:103,480,731...103,485,963
Ensembl chr 1:94,344,195...94,349,424 		JBrowse link
G Klk5 kallikrein related-peptidase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:103,432,743...103,442,011
Ensembl chr 1:94,296,168...94,304,666 		JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO
IEA		 (PMID:15159456)
GO_REF:0000107		 RGD
Ensembl		 PMID:15159456 GO_REF:0000107 NCBI chr13:67,924,872...68,051,986
Ensembl chr13:65,374,372...65,501,492 		JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 involved_in ISO
IEA		 (PMID:24236012)
GO_REF:0000107		 RGD
Ensembl		 PMID:24236012 GO_REF:0000107 NCBI chr15:56,846,375...56,954,090
Ensembl chr15:50,488,149...50,544,680 		JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17987127)
(PMID:8576151), (PMID:9065415)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:8576151 PMID:9065415 PMID:17987127 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:12,782,829...12,793,108
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
G Mmp20 matrix metallopeptidase 20 acts_upstream_of_or_within ISO
IEA		 MGI:2447874 (PMID:22243248)
GO_REF:0000107		 RGD
Ensembl		 PMID:22243248 GO_REF:0000107 NCBI chr 8:13,074,279...13,114,894
Ensembl chr 8:4,789,415...4,830,035 		JBrowse link
G Noxo1 NADPH oxidase organizer 1 involved_in ISO
IEA		 (PMID:19755710)
GO_REF:0000107		 RGD
Ensembl		 PMID:19755710 GO_REF:0000107 NCBI chr10:14,226,473...14,230,541
Ensembl chr10:13,721,473...13,726,061 		JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3665440|MGI:6363079 (PMID:30659184)
GO_REF:0000107		 RGD
Ensembl		 PMID:30659184 GO_REF:0000107 NCBI chr 2:177,154,056...177,167,810
Ensembl chr 2:174,856,397...174,868,919 		JBrowse link
G Plg plasminogen involved_in ISO (PMID:14699093) RGD PMID:14699093 NCBI chr 1:50,872,927...50,915,406
Ensembl chr 1:48,325,185...48,367,786 		JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO
IEA		 (PMID:19755710)
GO_REF:0000107		 RGD
Ensembl		 PMID:19755710 GO_REF:0000107 NCBI chr10:17,422,906...17,538,977
Ensembl chr10:16,918,679...17,005,170 		JBrowse link
G Tpsab1 tryptase alpha/beta 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr10:14,864,887...14,867,302
Ensembl chr10:14,360,396...14,362,811 		JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr 9:113,169,730...113,179,829
Ensembl chr 9:105,722,899...105,733,009 		JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO MGI:5913851 (PMID:26247047) RGD PMID:26247047 NCBI chr 8:83,718,897...83,902,128
Ensembl chr 8:74,838,318...75,018,229 		JBrowse link
extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:18757743)		 GO_Central
Ensembl
RGD		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr11:57,381,282...57,597,989
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr11:38,418,565...38,427,384
Ensembl chr11:24,931,761...24,941,103 		JBrowse link
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:15,033,859...15,063,800
Ensembl chr 7:14,331,745...14,361,620 		JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:61,759,975...62,054,716
Ensembl chr 2:60,032,873...60,327,629 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:30,697,354...30,736,539
Ensembl chr 3:10,300,028...10,346,687 		JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr20:29,685,876...29,762,685
Ensembl chr20:29,144,354...29,219,866 		JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:37,566,064...37,589,446
Ensembl chr 8:29,307,865...29,331,249 		JBrowse link
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:34,258,899...34,388,952
Ensembl chr 1:32,430,436...32,560,494 		JBrowse link
G Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:129,856,062...130,178,430
Ensembl chr 1:120,445,749...120,768,202 		JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr19:58,596,095...58,749,239
Ensembl chr19:41,688,617...41,839,781 		JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr18:54,545,357...54,729,184
Ensembl chr18:52,347,428...52,530,509 		JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr10:35,422,030...35,627,483
Ensembl chr10:34,921,049...35,123,821 		JBrowse link
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:18454205)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:18454205 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:127,275,538...127,407,325
Ensembl chr 7:125,397,734...125,527,777 		JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1, motif 3 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr14:18,515,249...18,721,887
Ensembl chr14:18,231,165...18,435,556 		JBrowse link
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr13:86,203,011...86,212,500
Ensembl chr13:83,670,183...83,680,065 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr11:38,486,945...38,533,516
Ensembl chr11:25,000,637...25,047,205 		JBrowse link
G Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:37,155,260...37,367,077
Ensembl chr 2:35,421,510...35,633,298 		JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:99,584,529...99,624,132
Ensembl chr 8:90,704,727...90,744,328 		JBrowse link
G Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:37,607,001...37,626,597
Ensembl chr 8:29,349,114...29,368,404 		JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 involved_in ISO
IEA
IBA		 (PMID:20096780)
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:20096780 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:126,847,726...127,019,924
Ensembl chr 4:125,291,490...125,462,929 		JBrowse link
G Adamtsl1 ADAMTS-like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:105,010,471...105,965,792
Ensembl chr 5:99,964,486...100,918,384 		JBrowse link
G Adamtsl2 ADAMTS-like 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25762570)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:25762570 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:30,795,882...30,832,635
Ensembl chr 3:10,404,626...10,434,554 		JBrowse link
G Adamtsl3 ADAMTS-like 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:145,698,004...146,006,195
Ensembl chr 1:136,288,793...136,596,986 		JBrowse link
G Adamtsl4 ADAMTS-like 4 acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 2:185,924,582...185,936,039
Ensembl chr 2:183,235,646...183,246,848 		JBrowse link
G Adamtsl5 ADAMTS-like 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:10,013,306...10,021,924
Ensembl chr 7:9,363,237...9,370,285 		JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2136636 (PMID:9734405) RGD PMID:9734405 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO MGI:108405 (PMID:16407979) RGD PMID:16407979 NCBI chr 1:169,308,719...169,332,372
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 acts_upstream_of_or_within ISO
IEA		 MGI:107765 (PMID:16407979)
GO_REF:0000107		 RGD
Ensembl		 PMID:16407979 GO_REF:0000107 NCBI chr14:41,849,638...42,232,930
Ensembl chr14:41,557,972...41,877,495 		JBrowse link
G Aplp1 amyloid beta precursor like protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:88047|MGI:88059 (PMID:15385965)
GO_REF:0000107		 RGD
Ensembl		 PMID:15385965 GO_REF:0000107 NCBI chr 1:94,824,330...94,834,705
Ensembl chr 1:85,696,882...85,707,155 		JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO MGI:88046|MGI:88059 (PMID:15385965) RGD PMID:15385965 NCBI chr 8:37,857,407...37,920,487
Ensembl chr 8:29,599,230...29,661,855 		JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:88046|MGI:88047 (PMID:15385965)		 UniProt
RGD		 PMID:15385965 GO_REF:0000024 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097 (PMID:1115218) RGD PMID:1115218 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Atxn1l ataxin 1 like acts_upstream_of_or_within ISO
IEA		 MGI:5301616 (PMID:22014525)
GO_REF:0000107		 RGD
Ensembl		 PMID:22014525 GO_REF:0000107 NCBI chr19:54,609,852...54,621,024
Ensembl chr19:37,700,106...37,711,538 		JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 MGI:2178779 (PMID:11900463)
GO_REF:0000107		 RGD
Ensembl		 PMID:11900463 GO_REF:0000107 NCBI chr 5:60,731,601...60,778,456
Ensembl chr 5:55,935,615...55,982,461 		JBrowse link
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:2158443 (PMID:10586052) RGD PMID:10586052 NCBI chr 1:88,599,321...88,613,555
Ensembl chr 1:79,471,369...79,485,607 		JBrowse link
G C20h6orf15 similar to human chromosome 6 open reading frame 15 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:18757743)
GO_REF:0000033		 RGD
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr20:3,177,040...3,178,596
Ensembl chr20:3,172,330...3,173,886 		JBrowse link
G Ccdc80 coiled-coil domain containing 80 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:18757743)		 GO_Central
Ensembl
RGD		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr11:69,191,188...69,224,844
Ensembl chr11:55,685,872...55,719,137 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:234,562,408...234,565,484 		JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain acts_upstream_of_or_within ISO MGI:2179134 (PMID:15254016) RGD PMID:15254016 NCBI chr20:11,473,645...11,582,111
Ensembl chr20:11,474,104...11,582,593 		JBrowse link
G Col19a1 collagen type XIX alpha 1 chain acts_upstream_of_or_within ISO MGI:3053870 (PMID:15302855) RGD PMID:15302855 NCBI chr 9:34,170,248...34,518,478
Ensembl chr 9:26,675,391...27,022,106 		JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:5315593 (PMID:22206015)
GO_REF:0000107		 RGD
Ensembl		 PMID:22206015 GO_REF:0000107 NCBI chr 5:81,662,822...81,781,502
Ensembl chr 5:76,647,429...76,765,174 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1857431|MGI:1860700 (PMID:25330296), (PMID:31655293) RGD PMID:25330296 PMID:31655293 NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain acts_upstream_of_or_within ISO (PMID:10965041) RGD PMID:10965041 NCBI chr  X:109,554,945...109,905,987
Ensembl chr  X:104,766,957...105,117,500 		JBrowse link
G Col6a5 collagen type VI alpha 5 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:115,362,532...115,462,844
Ensembl chr 8:106,483,799...106,584,113 		JBrowse link
G Col6a6 collagen type VI alpha 6 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:115,196,833...115,352,161
Ensembl chr 8:106,306,422...106,473,472 		JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr19:64,961,764...65,020,099
Ensembl chr19:48,053,287...48,110,465 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO
IEA		 MGI:4947395 (PMID:21148564)
GO_REF:0000107		 RGD
Ensembl		 PMID:21148564 GO_REF:0000107 NCBI chr16:25,761,946...26,097,306
Ensembl chr16:21,235,784...21,330,319 		JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
(PMID:18757743)
GO_REF:0000033		 InterPro
RGD
GO_Central		 PMID:18757743 GO_REF:0000002 GO_REF:0000033 NCBI chr14:5,833,111...5,867,154
Ensembl chr14:5,528,431...5,539,323 		JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (PMID:21972064) RGD PMID:21972064 NCBI chr 4:6,010,081...6,232,052
Ensembl chr 4:5,452,683...5,556,659 		JBrowse link
G Ecm2 extracellular matrix protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:18757743)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr17:15,326,359...15,358,938
Ensembl chr17:15,120,196...15,152,516 		JBrowse link
G Egfl6 EGF-like-domain, multiple 6 acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr  X:27,884,087...27,942,044
Ensembl chr  X:27,884,125...27,942,044 		JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 2:58,029,934...58,204,010
Ensembl chr 2:56,302,566...56,476,298 		JBrowse link
G Elf3 E74 like ETS transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:2662485 (PMID:11984530)
GO_REF:0000107		 RGD
Ensembl		 PMID:11984530 GO_REF:0000107 NCBI chr13:49,242,265...49,247,102
Ensembl chr13:46,690,466...46,695,481 		JBrowse link
G Eln elastin acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr12:27,604,983...27,648,413
Ensembl chr12:21,968,544...22,011,928 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 6:31,175,919...31,183,657
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO
IEA		 MGI:2183949 (PMID:9651581)
GO_REF:0000107		 RGD
Ensembl		 PMID:9651581 GO_REF:0000107 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO
IEA		 MGI:1859815|MGI:1914725 (PMID:22981861)
GO_REF:0000107		 RGD
Ensembl		 PMID:22981861 GO_REF:0000107 NCBI chr15:20,974,771...21,010,170
Ensembl chr15:18,492,945...18,530,478 		JBrowse link
G Ero1b endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO
IEA		 MGI:1354385|MGI:1859815 (PMID:22981861)
GO_REF:0000107		 RGD
Ensembl		 PMID:22981861 GO_REF:0000107 NCBI chr17:92,913,696...92,987,401
Ensembl chr17:85,929,618...86,003,398 		JBrowse link
G Fbln1 fibulin 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:18757743)		 GO_Central
Ensembl
InterPro
RGD		 PMID:18757743 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:118,190,347...118,269,965
Ensembl chr 7:116,310,582...116,390,075 		JBrowse link
G Fbln5 fibulin 5 acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 6:126,664,100...126,742,847
Ensembl chr 6:120,899,224...120,977,755 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:31296900) RGD PMID:31296900 NCBI chr 1:86,607,769...86,615,045
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Fn1 fibronectin 1 IMP RGD PMID:12388756 RGD:1358623 NCBI chr 9:80,645,507...80,714,200
Ensembl chr 9:73,196,044...73,264,678 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO
IEA		 MGI:1347479 (PMID:16439479)
GO_REF:0000107		 RGD
Ensembl		 PMID:16439479 GO_REF:0000107 NCBI chr19:66,062,635...66,066,427
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within ISO MGI:1347470|MGI:2667134 (PMID:16439479) RGD PMID:16439479 NCBI chr17:33,044,446...33,051,259
Ensembl chr17:32,836,777...32,842,176 		JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO
IEA		 MGI:2183221 (PMID:11487638)
GO_REF:0000107		 RGD
Ensembl		 PMID:11487638 GO_REF:0000107 NCBI chr10:88,352,987...88,361,661
Ensembl chr10:87,852,890...87,861,589 		JBrowse link
G Gfod2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:18757743)		 GO_Central
Ensembl
RGD		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr19:50,508,626...50,556,945
Ensembl chr19:33,604,187...33,647,004 		JBrowse link
G Hpse2 heparanase 2 (inactive) acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 MGI:4308701 (PMID:25510506)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25510506 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:251,532,149...252,231,316
Ensembl chr 1:241,583,187...242,246,118 		JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 3:100,445,393...100,568,898
Ensembl chr 3:79,990,056...80,113,617 		JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (PMID:10579729) RGD PMID:10579729 NCBI chr 5:154,960,818...155,061,971
Ensembl chr 5:149,677,476...149,778,594 		JBrowse link
G Ibsp integrin-binding sialoprotein involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:18757743)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:18757743 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:5,744,497...5,757,242
Ensembl chr14:5,439,829...5,452,693 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO MGI:2176236 (PMID:25410057) RGD PMID:25410057 NCBI chr14:1,175,994...1,203,913
Ensembl chr14:1,032,171...1,046,522 		JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 acts_upstream_of_or_within ISO
IEA		 MGI:6693683 (PMID:32265257)
GO_REF:0000107		 RGD
Ensembl		 PMID:32265257 GO_REF:0000107 NCBI chr 8:90,123,821...90,269,903
Ensembl chr 8:81,243,624...81,389,722 		JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 acts_upstream_of_or_within ISO MGI:6693686 (PMID:32265257) RGD PMID:32265257 NCBI chr11:57,787,914...57,887,450
Ensembl chr11:44,318,836...44,418,382 		JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO
IEA		 MGI:2181699 (PMID:10742111)
GO_REF:0000107		 RGD
Ensembl		 PMID:10742111 GO_REF:0000107 NCBI chr17:80,213,139...80,410,633
Ensembl chr17:75,304,008...75,501,510 		JBrowse link
G Itih1 inter-alpha trypsin inhibitor, heavy chain 1 acts_upstream_of_or_within ISO (PMID:17675295) RGD PMID:17675295 NCBI chr16:6,128,696...6,142,813
Ensembl chr16:6,122,248...6,136,363 		JBrowse link
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 1:253,888,639...253,892,211
Ensembl chr 1:243,939,647...243,943,059 		JBrowse link
G Lgals3 galectin 3 acts_upstream_of_or_within ISO MGI:97011 (PMID:15800063) RGD PMID:15800063 NCBI chr15:23,099,795...23,111,731
Ensembl chr15:20,607,692...20,632,025 		JBrowse link
G Mansc4 MANSC domain containing 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:179,991,845...180,000,716
Ensembl chr 4:179,991,860...180,001,038 		JBrowse link
G Matn3 matrilin 3 involved_in ISO
IEA		 (PMID:10660556)
GO_REF:0000107		 RGD
Ensembl		 PMID:10660556 GO_REF:0000107 NCBI chr 6:37,467,729...37,487,776
Ensembl chr 6:31,748,474...31,768,101 		JBrowse link
G Mia MIA SH3 domain containing involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2159701 (PMID:11839810)		 GO_Central
RGD		 PMID:11839810 GO_REF:0000033 NCBI chr 1:91,601,326...91,603,019
Ensembl chr 1:82,473,678...82,475,370 		JBrowse link
G Mmp10 matrix metallopeptidase 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:12,974,707...12,982,613
Ensembl chr 8:4,689,840...4,697,748 		JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 MGI:2387934 (PMID:18622425)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18622425 GO_REF:0000033 GO_REF:0000107 NCBI chr20:12,730,284...12,739,067
Ensembl chr20:12,730,836...12,739,628 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:12,866,652...12,876,554
Ensembl chr 8:4,581,785...4,599,611 		JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:12,782,829...12,793,108
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:31,857,824...31,867,049
Ensembl chr15:27,887,727...27,899,864 		JBrowse link
G Mmp15 matrix metallopeptidase 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:9,669,506...9,691,000
Ensembl chr19:9,663,449...9,684,943 		JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:36,109,265...36,353,252
Ensembl chr 5:31,312,280...31,548,388 		JBrowse link
G Mmp17 matrix metallopeptidase 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:32,710,504...32,735,418
Ensembl chr12:27,074,409...27,099,316 		JBrowse link
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:4,598,326...4,606,965
Ensembl chr 8:4,598,391...4,606,965 		JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:30,327,643...30,355,856
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Mmp20 matrix metallopeptidase 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:13,074,279...13,114,894
Ensembl chr 8:4,789,415...4,830,035 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:197,910,178...197,915,847
Ensembl chr 1:188,480,186...188,485,855 		JBrowse link
G Mmp23 matrix metallopeptidase 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:171,521,905...171,525,007
Ensembl chr 5:166,239,644...166,242,433 		JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:164,739,226...164,783,696
Ensembl chr 3:144,279,096...144,323,572 		JBrowse link
G Mmp25 matrix metallopeptidase 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,164,974...13,180,503
Ensembl chr10:12,661,208...12,675,871 		JBrowse link
G Mmp27 matrix metallopeptidase 27 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:13,030,752...13,040,671
Ensembl chr 8:4,745,883...4,755,806 		JBrowse link
G Mmp28 matrix metallopeptidase 28 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,738,651...68,762,377
Ensembl chr10:68,241,138...68,264,866 		JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:12,925,267...12,938,828
Ensembl chr 8:4,640,416...4,653,961 		JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:13,133,043...13,140,761
Ensembl chr 8:4,848,186...4,855,902 		JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:13,008,873...13,018,729
Ensembl chr 8:4,724,029...4,733,520 		JBrowse link
G Mmp9 matrix metallopeptidase 9 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 MGI:1932294|MGI:96778 (PMID:15800063)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:15800063 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
G Mpzl3 myelin protein zero-like 3 acts_upstream_of_or_within ISO MGI:1857012 (PMID:15482472) RGD PMID:15482472 NCBI chr 8:54,257,235...54,277,422
Ensembl chr 8:45,349,054...45,380,662 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO
IEA		 MGI:1857973 (PMID:16554364)
GO_REF:0000107		 RGD
Ensembl		 PMID:16554364 GO_REF:0000107 NCBI chr 7:44,689,407...44,692,638
Ensembl chr 7:42,802,946...42,806,177 		JBrowse link
G Ndnf neuron-derived neurotrophic factor involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:18757743)		 GO_Central
RGD		 PMID:18757743 GO_REF:0000033 NCBI chr 4:96,274,147...96,311,624
Ensembl chr 4:94,944,360...94,981,873 		JBrowse link
G Nepn nephrocan acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:32,329,314...32,342,162
Ensembl chr20:31,783,526...31,799,446 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:1857478 (PMID:16835260)		 HGNC-UCL
Ensembl
RGD		 PMID:16835260 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 acts_upstream_of_or_within ISO
IEA		 MGI:2179705 (PMID:10586052)
GO_REF:0000107		 RGD
Ensembl		 PMID:10586052 GO_REF:0000107 NCBI chr 1:255,106,010...255,114,649
Ensembl chr 1:245,165,950...245,173,213 		JBrowse link
G Nid1 nidogen 1 acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr17:93,069,013...93,142,416
Ensembl chr17:86,085,077...86,158,267 		JBrowse link
G Nox1 NADPH oxidase 1 acts_upstream_of_or_within ISO
IEA		 MGI:3616995 (PMID:16386251)
GO_REF:0000107		 RGD
Ensembl		 PMID:16386251 GO_REF:0000107 NCBI chr  X:101,572,338...101,625,571
Ensembl chr  X:97,279,056...97,302,236 		JBrowse link
G Nphp3 nephrocystin 3 acts_upstream_of_or_within ISO
IEA		 MGI:1856987 (PMID:7539536)
GO_REF:0000107		 RGD
Ensembl		 PMID:7539536 GO_REF:0000107 NCBI chr 8:113,500,708...113,541,179
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 2:224,065,191...224,133,567
Ensembl chr 2:221,391,153...221,459,401 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO
IEA		 MGI:2176560 (PMID:16424942)
GO_REF:0000107		 RGD
Ensembl		 PMID:16424942 GO_REF:0000107 NCBI chr20:47,632,347...47,653,464
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Olfml2a olfactomedin-like 2A acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 3:22,688,590...22,717,917
Ensembl chr 3:22,688,598...22,717,909 		JBrowse link
G Olfml2b olfactomedin-like 2B acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr13:85,402,151...85,439,342
Ensembl chr13:82,869,433...82,906,607 		JBrowse link
G Papln papilin, proteoglycan-like sulfated glycoprotein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:103,398,166...103,432,199
Ensembl chr 6:103,398,838...103,432,206 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO
IEA		 MGI:1926728 (PMID:15543606)
GO_REF:0000107		 RGD
Ensembl		 PMID:15543606 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Pomt1 protein-O-mannosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 MGI:3497739 (PMID:15383666)
GO_REF:0000107		 RGD
Ensembl		 PMID:15383666 GO_REF:0000107 NCBI chr 3:35,918,370...35,936,330
Ensembl chr 3:15,520,481...15,538,581 		JBrowse link
G Postn periostin involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:16314533)		 GO_Central
Ensembl
RGD		 PMID:16314533 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:140,677,774...140,709,304
Ensembl chr 2:138,527,696...138,559,099 		JBrowse link
G Prdx4 peroxiredoxin 4 acts_upstream_of_or_within ISO
IEA		 MGI:1354385|MGI:1914725 (PMID:22981861)
GO_REF:0000107		 RGD
Ensembl		 PMID:22981861 GO_REF:0000107 NCBI chr  X:43,876,374...43,893,815
Ensembl chr  X:40,026,651...40,044,066 		JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:2684666 (PMID:14642275) RGD PMID:14642275 NCBI chr 7:107,015,730...107,220,865
Ensembl chr 7:105,126,728...105,331,783 		JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (PMID:17675295) RGD PMID:17675295 NCBI chr 2:152,797,563...152,803,372
Ensembl chr 2:150,487,513...150,493,323 		JBrowse link
G Pxdn peroxidasin involved_in ISO
IEA		 (PMID:19590037)
GO_REF:0000107		 RGD
Ensembl		 PMID:19590037 GO_REF:0000107 NCBI chr 6:52,308,347...52,385,943
Ensembl chr 6:46,580,761...46,658,345 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:3623517 (PMID:11747814)		 GO_Central
Ensembl
RGD		 PMID:11747814 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:62,898,717...62,965,274
Ensembl chr 5:58,102,981...58,169,502 		JBrowse link
G Rxfp1 relaxin family peptide receptor 1 acts_upstream_of_or_within ISO
IEA		 MGI:3054831 (PMID:15256493)
GO_REF:0000107		 RGD
Ensembl		 PMID:15256493 GO_REF:0000107 NCBI chr 2:167,070,414...167,191,616
Ensembl chr 2:164,774,799...164,893,412 		JBrowse link
G Serac1 serine active site containing 1 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 1:46,620,741...46,656,801
Ensembl chr 1:46,620,498...46,656,727 		JBrowse link
G Serpinb5 serpin family B member 5 acts_upstream_of_or_within ISO
IEA		 MGI:3040188 (PMID:18593913)
GO_REF:0000107		 RGD
Ensembl		 PMID:18593913 GO_REF:0000107 NCBI chr13:23,500,203...23,520,401
Ensembl chr13:22,985,557...23,005,756 		JBrowse link
G Slc39a8 solute carrier family 39 member 8 acts_upstream_of ISO
IEA
ISS		 (PMID:29337306)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:29337306 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:226,845,686...226,992,668
Ensembl chr 2:224,256,654...224,319,129 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO MGI:2450311|MGI:3605892 (PMID:18267097) RGD PMID:18267097 NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smoc1 SPARC related modular calcium binding 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:18757743)		 GO_Central
RGD		 PMID:18757743 GO_REF:0000033 NCBI chr 6:106,432,592...106,593,956
Ensembl chr 6:100,701,346...100,862,699 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:18757743)		 GO_Central
RGD		 PMID:18757743 GO_REF:0000033 NCBI chr 1:63,935,627...64,064,952
Ensembl chr 1:55,262,530...55,391,693 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO
IEA		 MGI:2385468|MGI:2450311 (PMID:17350610), (PMID:24191021)
GO_REF:0000107		 RGD
Ensembl		 PMID:17350610 PMID:24191021 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 MGI:3709554 (PMID:17174946)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:17174946 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:126,685,017...126,697,957
Ensembl chr 3:106,231,444...106,244,119 		JBrowse link
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr20:28,580,262...28,607,198
Ensembl chr20:28,033,475...28,064,272 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO
IEA		 MGI:1888389 (PMID:11784073), (PMID:15528466)
GO_REF:0000107		 RGD
Ensembl		 PMID:11784073 PMID:15528466 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfbi transforming growth factor, beta induced involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:18757743)		 GO_Central
Ensembl
RGD		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr17:7,960,885...7,990,234
Ensembl chr17:7,955,603...7,985,240 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (PMID:15381731) RGD PMID:15381731 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr 7:87,456,318...87,484,324
Ensembl chr 7:85,566,520...85,594,538 		JBrowse link
G Tnr tenascin R acts_upstream_of_or_within ISO
IEA		 MGI:2154583 (PMID:10341229), (PMID:11077416), (PMID:16870730)
GO_REF:0000107		 RGD
Ensembl		 PMID:10341229 PMID:11077416 PMID:16870730 GO_REF:0000107 NCBI chr13:74,285,141...74,706,174
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO
IEA		 MGI:3053791 (PMID:15242785)
GO_REF:0000107		 RGD
Ensembl		 PMID:15242785 GO_REF:0000107
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO
IEA		 MGI:2136645|MGI:2450311 (PMID:16537898)
GO_REF:0000107		 RGD
Ensembl		 PMID:16537898 GO_REF:0000107 NCBI chr 4:148,328,099...148,334,992
Ensembl chr 4:146,772,468...146,779,377 		JBrowse link
G Vit vitrin involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:18757743)		 GO_Central
Ensembl
RGD		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:16,445,966...16,565,644
Ensembl chr 6:16,445,955...16,565,665 		JBrowse link
G Vtn vitronectin acts_upstream_of_or_within ISO
IEA		 (PMID:18757743)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 GO_REF:0000107 NCBI chr10:63,892,782...63,895,862
Ensembl chr10:63,394,719...63,397,810 		JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 acts_upstream_of_or_within ISO
IEA		 MGI:3809230 (PMID:18757743), (PMID:19279005)
GO_REF:0000107		 RGD
Ensembl		 PMID:18757743 PMID:19279005 GO_REF:0000107 NCBI chr 5:171,659,694...171,664,880
Ensembl chr 5:166,377,455...166,382,637 		JBrowse link
G Vwf von Willebrand factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:158,360,152...158,491,539 		JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:35181734) RGD PMID:35181734 NCBI chr 8:83,718,897...83,902,128
Ensembl chr 8:74,838,318...75,018,229 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO
IEA		 (PMID:17943183)
GO_REF:0000107		 RGD
Ensembl		 PMID:17943183 GO_REF:0000107 NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (PMID:23900597) RGD PMID:23900597 NCBI chr14:5,870,232...5,876,339
Ensembl chr14:5,565,629...5,571,672 		JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3665440|MGI:6363079 (PMID:30659184)
GO_REF:0000107		 RGD
Ensembl		 PMID:30659184 GO_REF:0000107 NCBI chr 2:177,154,056...177,167,810
Ensembl chr 2:174,856,397...174,868,919 		JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within ISO MGI:6765940 (PMID:34368841) RGD PMID:34368841 NCBI chr19:67,190,901...67,232,569 JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a3 collagen type IV alpha 3 chain involved_in ISO (PMID:12631063) RGD PMID:12631063 NCBI chr 9:91,323,990...91,453,088
Ensembl chr 9:83,875,561...84,001,895 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17942953), (PMID:19675380)
GO_REF:0000107
MGI:1857960 (PMID:10534397)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:10534397 PMID:17942953 PMID:19675380 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:91,281,324...91,323,577
Ensembl chr 9:83,755,515...83,875,876 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:18480751)
GO_REF:0000107		 RGD
Ensembl		 PMID:18480751 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 involved_in ISO (PMID:16041630) RGD PMID:16041630 NCBI chr 6:30,941,693...30,956,389
Ensembl chr 6:25,222,896...25,236,244 		JBrowse link
G Myo1e myosin IE involved_in ISS
ISO		 GO_REF:0000024
(PMID:19005011)		 UniProt
RGD		 PMID:19005011 GO_REF:0000024 NCBI chr 8:79,768,828...79,961,048
Ensembl chr 8:70,887,870...71,080,169 		JBrowse link
G Nid1 nidogen 1 acts_upstream_of_or_within ISO
IEA		 MGI:2682959 (PMID:14566019)
GO_REF:0000107		 RGD
Ensembl		 PMID:14566019 GO_REF:0000107 NCBI chr17:93,069,013...93,142,416
Ensembl chr17:86,085,077...86,158,267 		JBrowse link
G Sulf1 sulfatase 1 involved_in IBA
ISO		 GO_REF:0000033
UniProtKB:Q8CFG0 (PMID:21719793)		 GO_Central
RGD		 PMID:21719793 GO_REF:0000033 NCBI chr 5:11,145,950...11,308,622
Ensembl chr 5:6,362,911...6,525,584 		JBrowse link
G Sulf2 sulfatase 2 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
UniProtKB:Q8K007 (PMID:21719793)		 GO_Central
Ensembl
RGD		 PMID:21719793 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:175,241,322...175,323,808
Ensembl chr 3:154,822,085...154,904,415 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO
IEA
ISS		 (PMID:19205749)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19205749 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
intercellular bridge organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tex14 testis expressed 14, intercellular bridge forming factor involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:16549803)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107		 UniProt
RGD
GO_Central
InterPro
Ensembl		 PMID:16549803 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:72,729,017...72,859,697
Ensembl chr10:72,231,801...72,355,805 		JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO
IEA		 MGI:2138070 (PMID:16886065), (PMID:7670489)
GO_REF:0000107		 RGD
Ensembl		 PMID:7670489 PMID:16886065 GO_REF:0000107 NCBI chr 8:118,056,899...118,069,090
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chadl chondroadherin-like involved_in ISO
IEA		 (PMID:25451920)
GO_REF:0000107		 RGD
Ensembl		 PMID:25451920 GO_REF:0000107 NCBI chr 7:115,085,447...115,097,565
Ensembl chr 7:113,210,748...113,217,272 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO
IEA		 (PMID:25056700)
GO_REF:0000107		 RGD
Ensembl		 PMID:25056700 GO_REF:0000107 NCBI chr 6:31,175,919...31,183,657
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antxr1 ANTXR cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:5754386 (PMID:25572963) RGD PMID:25572963 NCBI chr 4:121,148,102...121,335,549
Ensembl chr 4:119,590,771...119,778,232 		JBrowse link
G Mir145 microRNA 145 acts_upstream_of
involved_in		 ISO UniProtKB:P01137 (PMID:25323858)
(PMID:25704091)		 RGD PMID:25323858 PMID:25704091 NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727 		JBrowse link
G Mir18a microRNA 18a involved_in ISO (PMID:28131417) RGD PMID:28131417 NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of ISO (PMID:27098600) RGD PMID:27098600 NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993 		JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of ISO (PMID:27098600) RGD PMID:27098600 NCBI chr15:98,588,433...98,588,519
Ensembl chr15:92,181,214...92,181,300 		JBrowse link
G Mir19b2 microRNA 19b-2 acts_upstream_of ISO (PMID:27098600) RGD PMID:27098600 NCBI chr  X:137,343,058...137,343,153
Ensembl chr  X:132,422,072...132,422,167 		JBrowse link
G Mir27b microRNA 27b acts_upstream_of ISO (PMID:28095798) RGD PMID:28095798 NCBI chr17:1,819,147...1,819,243
Ensembl chr17:1,813,426...1,813,529 		JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of ISO (PMID:26315535) RGD PMID:26315535 NCBI chr 1:142,849,400...142,849,489 JBrowse link
G Mir98 microRNA 98 acts_upstream_of ISO (PMID:28251559) RGD PMID:28251559 NCBI chr  X:24,460,648...24,460,755
Ensembl chr  X:20,981,235...20,981,342 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:25704091) RGD PMID:25704091 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO
IEA		 (PMID:30729664)
GO_REF:0000107		 RGD
Ensembl		 PMID:30729664 GO_REF:0000107 NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO
IEA		 (PMID:28341552)
GO_REF:0000107		 RGD
Ensembl		 PMID:28341552 GO_REF:0000107 NCBI chr17:23,113,578...23,199,616
Ensembl chr17:22,930,740...22,993,826 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO
IEA		 (PMID:26491108)
GO_REF:0000107		 RGD
Ensembl		 PMID:26491108 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in ISO UniProtKB:P25119 (PMID:26491108) RGD PMID:26491108 NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:158,150,820...158,163,591 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO UniProtKB:P25118 (PMID:26491108) RGD PMID:26491108 NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:157,070,642...157,104,206 		JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:136,336,920...136,340,822 		JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16651416)		 UniProt
RGD		 PMID:16651416 GO_REF:0000024 NCBI chr 3:67,370,794...67,452,422
Ensembl chr 3:46,962,243...47,043,901 		JBrowse link
G Fap fibroblast activation protein, alpha involved_in ISO
IEA		 (PMID:16651416)
GO_REF:0000107		 RGD
Ensembl		 PMID:16651416 GO_REF:0000107 NCBI chr 3:67,547,398...67,616,271
Ensembl chr 3:47,138,813...47,225,545 		JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of ISO (PMID:23820254) RGD PMID:23820254 NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413 		JBrowse link
G Mir92a2 microRNA 92a-2 acts_upstream_of ISO (PMID:23820254) RGD PMID:23820254 NCBI chr  X:137,342,928...137,343,019
Ensembl chr  X:132,421,942...132,422,033 		JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:26587789) RGD PMID:26587789 NCBI chr  X:24,460,648...24,460,755
Ensembl chr  X:20,981,235...20,981,342 		JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fap fibroblast activation protein, alpha involved_in ISO
IEA		 (PMID:10455171)
GO_REF:0000107		 RGD
Ensembl		 PMID:10455171 GO_REF:0000107 NCBI chr 3:67,547,398...67,616,271
Ensembl chr 3:47,138,813...47,225,545 		JBrowse link
polarized secretion of basement membrane proteins in epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:5645931 (PMID:33144400)		 Ensembl
RGD		 PMID:33144400 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 involved_in ISO
IEA		 (PMID:27402836)
GO_REF:0000107		 RGD
Ensembl		 PMID:27402836 GO_REF:0000107 NCBI chr16:18,353,779...18,366,087
Ensembl chr16:18,319,795...18,332,106 		JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO
IEA		 (PMID:26178373), (PMID:26220971), (PMID:26711913)
GO_REF:0000107		 RGD
Ensembl		 PMID:26178373 PMID:26220971 PMID:26711913 GO_REF:0000107 NCBI chr 1:212,211,057...212,218,739
Ensembl chr 1:202,781,665...202,789,414 		JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:29304157)		 Ensembl
RGD		 PMID:29304157 GO_REF:0000107 NCBI chr15:54,780,858...54,911,989
Ensembl chr15:48,371,296...48,502,302 		JBrowse link
G Tnxb tenascin XB involved_in ISO
IEA		 (PMID:17033827)
GO_REF:0000107		 RGD
Ensembl		 PMID:17033827 GO_REF:0000107
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of ISO
IEA		 (PMID:30729664)
GO_REF:0000107		 RGD
Ensembl		 PMID:30729664 GO_REF:0000107 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO
IEA		 (PMID:25056700)
GO_REF:0000107		 RGD
Ensembl		 PMID:25056700 GO_REF:0000107 NCBI chr 6:31,175,919...31,183,657
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 IMP RGD PMID:27488450 RGD:152995505 NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Mir27b microRNA 27b acts_upstream_of ISO (PMID:30729664) RGD PMID:30729664 NCBI chr17:1,819,147...1,819,243
Ensembl chr17:1,813,426...1,813,529 		JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:21307346) RGD PMID:21307346 NCBI chr15:61,071,574...61,084,408
Ensembl chr15:54,662,483...54,681,141 		JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of		 ISO
IEA		 (PMID:21307346)
(PMID:30729664)
GO_REF:0000107		 RGD
Ensembl		 PMID:21307346 PMID:30729664 GO_REF:0000107 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:26747772)		 Ensembl
RGD		 PMID:26747772 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO
IEA		 MGI:2176205|MGI:2385468 (PMID:20881014)
GO_REF:0000107		 RGD
Ensembl		 PMID:20881014 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of ISO
IEA		 (PMID:24279830)
GO_REF:0000107		 RGD
Ensembl		 PMID:24279830 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of ISO
IEA		 (PMID:28251559)
GO_REF:0000107		 RGD
Ensembl		 PMID:28251559 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21419085 RGD:5129171 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16730346)		 Ensembl
RGD		 PMID:16730346 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Cpb2 carboxypeptidase B2 IMP RGD PMID:23369837 RGD:7243115 NCBI chr15:56,967,128...57,015,964
Ensembl chr15:50,557,717...50,606,556 		JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:72,749,976...72,761,060
Ensembl chr18:70,474,926...70,526,470 		JBrowse link
G Ier3ip1-ps1 immediate early response 3 interacting protein 1, pseudogene 1 involved_in ISO (PMID:33122427) RGD PMID:33122427 NCBI chr 4:133,898,662...133,899,156
Ensembl chr 4:132,332,180...132,342,316 		JBrowse link
G Rgcc regulator of cell cycle acts_upstream_of ISO (PMID:19158077) RGD PMID:19158077 NCBI chr15:61,071,574...61,084,408
Ensembl chr15:54,662,483...54,681,141 		JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in ISO
IEA		 (PMID:26466680), (PMID:26578515)
GO_REF:0000107		 RGD
Ensembl		 PMID:26466680 PMID:26578515 GO_REF:0000107 NCBI chr19:50,481,911...50,496,672
Ensembl chr19:33,574,257...33,586,965 		JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:32,046,362...32,267,954
Ensembl chr13:29,493,596...29,715,146 		JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:122,555,532...122,736,934
Ensembl chr 8:113,677,284...113,858,731 		JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO
IEA		 (PMID:11723120)
GO_REF:0000107		 RGD
Ensembl		 PMID:11723120 GO_REF:0000107 NCBI chr13:84,726,412...84,851,032
Ensembl chr13:82,195,463...82,317,363 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISO
IEA
ISS		 (PMID:20137952)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20137952 GO_REF:0000024 GO_REF:0000107 NCBI chr12:16,710,601...16,723,734
Ensembl chr12:11,597,048...11,610,211 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:26587789) RGD PMID:26587789 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Meltf melanotransferrin involved_in ISO
IEA		 (PMID:16713448)
GO_REF:0000107		 RGD
Ensembl		 PMID:16713448 GO_REF:0000107 NCBI chr11:82,389,420...82,411,270
Ensembl chr11:68,884,446...68,906,300 		JBrowse link
G Pdpn podoplanin involved_in ISS
ISO		 GO_REF:0000024
(PMID:25486435)		 UniProt
RGD		 PMID:25486435 GO_REF:0000024 NCBI chr 5:160,884,995...160,919,112
Ensembl chr 5:155,601,691...155,635,656 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 acts_upstream_of ISO RNAcentral:URS00003768C5_9606 (PMID:23820254) RGD PMID:23820254 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA		 (PMID:21984612)
GO_REF:0000107		 RGD
Ensembl		 PMID:21984612 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase IMP RGD PMID:19846571 RGD:8693597 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:24691542 RGD:11341715 NCBI chr 9:67,679,502...67,747,226
Ensembl chr 9:60,185,452...60,237,034 		JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 IMP RGD PMID:29656108 RGD:150520032 NCBI chr 5:116,295,691...116,323,219
Ensembl chr 5:111,178,703...111,244,794 		JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO
IEA		 (PMID:29304157)
GO_REF:0000107		 RGD
Ensembl		 PMID:29304157 GO_REF:0000107 NCBI chr15:54,780,858...54,911,989
Ensembl chr15:48,371,296...48,502,302 		JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp1 AE binding protein 1 involved_in ISO
IEA
ISS		 (PMID:29606302)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:29606302 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,951,577...84,962,840
Ensembl chr14:80,738,892...80,748,877 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:2153356 (PMID:20951202)
GO_REF:0000107		 RGD
Ensembl		 PMID:20951202 GO_REF:0000107 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO
IEA		 (PMID:26690653)
GO_REF:0000107		 RGD
Ensembl		 PMID:26690653 GO_REF:0000107 NCBI chr 1:212,211,057...212,218,739
Ensembl chr 1:202,781,665...202,789,414 		JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO
IEA		 UniProtKB:P00797 (PMID:17416596)
GO_REF:0000107		 RGD
Ensembl		 PMID:17416596 GO_REF:0000107 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977 		JBrowse link
G Has2 hyaluronan synthase 2 IMP RGD PMID:27094859 RGD:12910548 NCBI chr 7:90,002,929...90,028,933
Ensembl chr 7:88,113,326...88,128,933 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO
IEA		 (PMID:21311046)
GO_REF:0000107		 RGD
Ensembl		 PMID:21311046 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 acts_upstream_of ISO
IEA		 (PMID:31319059)
GO_REF:0000107		 RGD
Ensembl		 PMID:31319059 GO_REF:0000107 NCBI chr 5:137,285,408...137,305,047
Ensembl chr 5:132,000,015...132,019,592 		JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:31932796) RGD PMID:31932796 NCBI chr 1:236,698,901...236,798,099
Ensembl chr 1:227,285,210...227,382,863 		JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in ISO
IEA
ISS		 (PMID:12065315)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12065315 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,047,269...3,069,277
Ensembl chr20:3,044,320...3,064,468 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IMP RGD PMID:16738537 RGD:2313717 NCBI chr 8:39,303,936...39,426,022
Ensembl chr 8:31,045,945...31,168,010 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO
IEA
ISS		 (PMID:20876804)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20876804 GO_REF:0000024 GO_REF:0000107 NCBI chr17:9,466,686...9,481,423
Ensembl chr17:9,461,547...9,476,242 		JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO
IEA		 MGI:87860 (PMID:20980600)
GO_REF:0000107		 RGD
Ensembl		 PMID:20980600 GO_REF:0000107 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (PMID:20980600) RGD PMID:20980600 NCBI chr13:71,223,902...71,319,770
Ensembl chr13:68,673,722...68,839,742 		JBrowse link
G Angptl7 angiopoietin like 7 involved_in ISO
IEA		 (PMID:21199193)
GO_REF:0000107		 RGD
Ensembl		 PMID:21199193 GO_REF:0000107 NCBI chr 5:164,215,223...164,220,408
Ensembl chr 5:158,932,794...158,937,324 		JBrowse link
G Axin2 axin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:28069701)		 Ensembl
RGD		 PMID:28069701 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within ISO
IEA		 MGI:2175913 (PMID:22984613)
GO_REF:0000107		 RGD
Ensembl		 PMID:22984613 GO_REF:0000107 NCBI chr10:90,009,927...90,067,787
Ensembl chr10:89,509,989...89,564,679 		JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO MGI:3703328 (PMID:16943282) RGD PMID:16943282 NCBI chr 7:58,300,556...58,389,485
Ensembl chr 7:56,305,448...56,502,474 		JBrowse link
G Lrp1 LDL receptor related protein 1 acts_upstream_of IEA
ISO		 GO_REF:0000107
(PMID:26781079)		 Ensembl
RGD		 PMID:26781079 GO_REF:0000107 NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:63,380,356...63,460,910 		JBrowse link
G Mir21 microRNA 21 acts_upstream_of ISO (PMID:18591254) RGD PMID:18591254 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348 		JBrowse link
G Prdm5 PR/SET domain 5 involved_in ISO (PMID:21664999) RGD PMID:21664999 NCBI chr 4:96,405,492...96,567,647
Ensembl chr 4:95,075,768...95,238,301 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in ISO
IEA		 (PMID:18591254)
GO_REF:0000107		 RGD
Ensembl		 PMID:18591254 GO_REF:0000107 NCBI chr 5:62,898,717...62,965,274
Ensembl chr 5:58,102,981...58,169,502 		JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO
IEA		 (PMID:26376865)
GO_REF:0000107		 RGD
Ensembl		 PMID:26376865 GO_REF:0000107 NCBI chr 3:174,659,683...174,671,978
Ensembl chr 3:154,240,391...154,252,690 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO
IEA		 MGI:1929775 (PMID:24038871)
GO_REF:0000107		 RGD
Ensembl		 PMID:24038871 GO_REF:0000107 NCBI chr 3:161,099,301...161,105,083
Ensembl chr 3:140,638,984...140,644,766 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO
IEA		 MGI:1888389 (PMID:21780244)
GO_REF:0000107		 RGD
Ensembl		 PMID:21780244 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Zfp469 zinc finger protein 469 involved_in ISO (PMID:21664999) RGD PMID:21664999 NCBI chr19:67,190,901...67,232,569 JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:1934258 (PMID:17881493)
GO_REF:0000107		 RGD
Ensembl		 PMID:17881493 GO_REF:0000107 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      cellular component organization or biogenesis 7104
        cellular component organization 6817
          extracellular structure organization 325
            extracellular matrix organization + 324
            intercellular bridge organization + 1
paths to the root