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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:iron oxide
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Accession:CHEBI:50816 term browser browse the term


show annotations for term's descendants           Sort by:
ferric oxide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis-associated tyrosine kinase increases expression ISO ferric oxide analog results in increased expression of AATK mRNA CTD PMID:25086211 NCBI chr10:105,290,752...105,327,219
Ensembl chr10:105,291,585...105,327,112 		JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 increases expression EXP ferric oxide analog results in increased expression of ABCG1 mRNA CTD PMID:38615722 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948 		JBrowse link
G Acan aggrecan increases expression EXP ferric oxide analog results in increased expression of ACAN mRNA CTD PMID:38615722 NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627 		JBrowse link
G Ache acetylcholinesterase decreases activity ISO ferric oxide results in decreased activity of ACHE protein CTD PMID:28993115 NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651 		JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 increases expression ISO ferric oxide analog results in increased expression of ACSS2 mRNA CTD PMID:25086211 NCBI chr 3:144,003,808...144,047,452
Ensembl chr 3:144,004,336...144,059,675 		JBrowse link
G Adgre1 adhesion G protein-coupled receptor E1 increases expression ISO ferric oxide analog results in increased expression of ADGRE1 mRNA CTD PMID:24525745 NCBI chr 9:2,242,476...2,398,000
Ensembl chr 9:2,242,474...2,398,000 		JBrowse link
G Adm adrenomedullin increases expression ISO ferric oxide analog results in increased expression of ADM mRNA CTD PMID:25086211 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654 		JBrowse link
G Adora2b adenosine A2B receptor increases expression ISO ferric oxide analog results in increased expression of ADORA2B mRNA CTD PMID:25086211 NCBI chr10:46,940,394...46,956,772
Ensembl chr10:46,940,384...46,956,772 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 decreases expression EXP ferric oxide analog results in decreased expression of AGTR2 mRNA CTD PMID:38615722 NCBI chr  X:112,119,876...112,124,060
Ensembl chr  X:112,120,228...112,124,057 		JBrowse link
G Ahnak2 AHNAK nucleoprotein 2 increases expression ISO ferric oxide analog results in increased expression of AHNAK2 mRNA CTD PMID:25086211 NCBI chr 6:131,830,668...131,876,311 JBrowse link
G Ahrr aryl-hydrocarbon receptor repressor increases expression ISO
EXP		 ferric oxide analog results in increased expression of AHRR mRNA CTD PMID:24525745 PMID:38615722 NCBI chr 1:28,993,634...29,088,673
Ensembl chr 1:28,993,634...29,088,673 		JBrowse link
G Aig1 androgen-induced 1 increases expression ISO ferric oxide analog results in increased expression of AIG1 mRNA CTD PMID:25086211 NCBI chr 1:8,046,430...8,269,276
Ensembl chr 1:8,046,430...8,269,084 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 multiple interactions EXP [ferric oxide analog co-treated with Acrolein] results in increased phosphorylation of AKT1 protein CTD PMID:24847785 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Alas1 5'-aminolevulinate synthase 1 increases expression EXP ferric oxide analog results in increased expression of ALAS1 mRNA CTD PMID:38615722 NCBI chr 8:106,876,514...106,889,917
Ensembl chr 8:106,876,514...106,889,917 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 decreases expression EXP ferric oxide analog results in decreased expression of ALDH1A2 mRNA CTD PMID:38615722 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 decreases expression ISO ferric oxide analog results in decreased expression of ALDH1L2 mRNA CTD PMID:25086211 NCBI chr 7:20,254,246...20,305,793
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
G Angpt1 angiopoietin 1 increases expression EXP ferric oxide analog results in increased expression of ANGPT1 mRNA CTD PMID:38615722 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067 		JBrowse link
G Angptl2 angiopoietin-like 2 decreases expression EXP ferric oxide analog results in decreased expression of ANGPTL2 mRNA CTD PMID:38615722 NCBI chr 3:16,517,185...16,547,024
Ensembl chr 3:16,517,420...16,548,178 		JBrowse link
G Ankrd12 ankyrin repeat domain 12 decreases expression ISO ferric oxide analog results in decreased expression of ANKRD12 mRNA CTD PMID:24525745 NCBI chr 9:105,583,273...105,687,957
Ensembl chr 9:105,584,065...105,687,911 		JBrowse link
G Anln anillin, actin binding protein decreases expression
increases expression		 ISO ferric oxide analog results in decreased expression of ANLN mRNA
ferric oxide analog results in increased expression of ANLN mRNA		 CTD PMID:24525745 PMID:25086211 NCBI chr 8:20,858,227...20,921,602
Ensembl chr 8:20,858,228...20,921,538 		JBrowse link
G Anxa3 annexin A3 decreases expression ISO ferric oxide analog results in decreased expression of ANXA3 mRNA CTD PMID:25086211 NCBI chr14:12,727,708...12,781,717
Ensembl chr14:12,719,795...12,781,617 		JBrowse link
G Aox1 aldehyde oxidase 1 increases expression EXP ferric oxide analog results in increased expression of AOX1 mRNA CTD PMID:38615722 NCBI chr 9:59,579,621...59,658,772
Ensembl chr 9:59,579,649...59,658,770 		JBrowse link
G Ap5b1 adaptor related protein complex 5 subunit beta 1 decreases expression ISO ferric oxide analog results in decreased expression of AP5B1 mRNA CTD PMID:25086211 NCBI chr 1:202,876,272...202,880,303
Ensembl chr 1:202,876,272...202,880,289 		JBrowse link
G Arhgap24 Rho GTPase activating protein 24 increases expression ISO ferric oxide analog results in increased expression of ARHGAP24 mRNA CTD PMID:25086211 NCBI chr14:6,800,624...7,183,877
Ensembl chr14:6,800,631...7,183,823 		JBrowse link
G Atf3 activating transcription factor 3 increases expression ISO ferric oxide analog results in increased expression of ATF3 protein CTD PMID:24068039 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631 		JBrowse link
G Atg5 autophagy related 5 increases expression ISO ferric oxide analog results in increased expression of ATG5 protein CTD PMID:24068039 NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Atosa atos homolog A increases expression ISO ferric oxide analog results in increased expression of ATOSA mRNA CTD PMID:25086211 NCBI chr 8:75,694,828...75,772,565
Ensembl chr 8:75,695,022...75,772,549 		JBrowse link
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) increases expression ISO ferric oxide analog results in increased expression of B3GALNT1 mRNA CTD PMID:24525745 NCBI chr 2:153,847,297...153,877,371
Ensembl chr 2:153,846,474...153,877,332 		JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 decreases expression EXP ferric oxide analog results in decreased expression of B3GALT2 mRNA CTD PMID:38615722 NCBI chr13:55,389,406...55,398,419
Ensembl chr13:55,389,406...55,398,419 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator multiple interactions
increases expression
decreases expression
increases phosphorylation		 ISO
EXP		 bromotetrandrine promotes the reaction [[ferric oxide co-treated with ferrous oxide co-treated with Daunorubicin] results in increased expression of BAX protein]
ferric oxide results in increased expression of BAX protein
ferric oxide results in decreased expression of BAX protein
ferric oxide analog results in increased phosphorylation of BAX protein		 CTD PMID:19421372 PMID:22995439 PMID:25086211 PMID:26991130 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bcl2 BCL2, apoptosis regulator increases phosphorylation
increases expression		 EXP
ISO		 ferric oxide analog results in increased phosphorylation of BCL2 protein
ferric oxide results in increased expression of BCL2 mRNA
ferric oxide analog results in increased expression of BCL2 protein		 CTD PMID:22995439 PMID:25086211 PMID:33554279 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bcl2l11 Bcl2-like 11 increases expression ISO ferric oxide analog results in increased expression of BCL2L11 mRNA; ferric oxide analog results in increased expression of BCL2L11 protein CTD PMID:24525745 PMID:25086211 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068 		JBrowse link
G Bdh2 3-hydroxybutyrate dehydrogenase 2 increases expression ISO ferric oxide analog results in increased expression of BDH2 mRNA CTD PMID:25086211 NCBI chr 2:223,702,410...223,723,076
Ensembl chr 2:223,702,412...223,723,072 		JBrowse link
G Becn1 beclin 1 decreases expression
increases expression		 ISO ferric oxide results in decreased expression of BECN1 protein
ferric oxide analog results in increased expression of BECN1 protein		 CTD PMID:24068039 PMID:25086211 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 increases expression ISO ferric oxide analog results in increased expression of BHLHE40 mRNA CTD PMID:25086211 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Bmp2 bone morphogenetic protein 2 increases expression EXP ferric oxide analog results in increased expression of BMP2 mRNA CTD PMID:38615722 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G C1s complement C1s increases expression EXP ferric oxide analog results in increased expression of C1S mRNA CTD PMID:38615722 NCBI chr 4:157,430,249...157,442,438
Ensembl chr 4:157,430,117...157,442,303 		JBrowse link
G Canx calnexin decreases expression ISO ferric oxide results in decreased expression of CANX protein CTD PMID:25086211 NCBI chr10:34,623,865...34,656,866
Ensembl chr10:34,625,191...34,656,821 		JBrowse link
G Car5b carbonic anhydrase 5B increases expression EXP ferric oxide analog results in increased expression of CAR5B mRNA CTD PMID:38615722 NCBI chr  X:30,474,697...30,534,797
Ensembl chr  X:30,474,784...30,533,837 		JBrowse link
G Casp3 caspase 3 multiple interactions
affects activity
increases expression
increases cleavage		 ISO bromotetrandrine promotes the reaction [[ferric oxide co-treated with ferrous oxide co-treated with Daunorubicin] results in increased expression of CASP3 protein]
ferric oxide affects the activity of CASP3 protein
ferric oxide results in increased expression of CASP3 protein modified form
ferric oxide results in increased cleavage of CASP3 protein		 CTD PMID:19421372 PMID:26991130 PMID:33554279 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Casp9 caspase 9 increases activity ISO ferric oxide results in increased activity of CASP9 protein CTD PMID:33554279 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626 		JBrowse link
G Castor1 cytosolic arginine sensor for mTORC1 subunit 1 increases expression ISO ferric oxide analog results in increased expression of CASTOR1 mRNA CTD PMID:25086211 NCBI chr14:79,086,136...79,090,549
Ensembl chr14:79,086,136...79,090,548 		JBrowse link
G Cat catalase decreases activity
decreases expression		 ISO ferric oxide results in decreased activity of CAT protein
ferric oxide results in decreased expression of CAT protein		 CTD PMID:19699289 PMID:26991130 PMID:28993115 NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478 		JBrowse link
G Ccdc85b coiled-coil domain containing 85B increases expression ISO ferric oxide analog results in increased expression of CCDC85B mRNA CTD PMID:25086211 NCBI chr 1:202,763,645...202,764,660
Ensembl chr 1:202,763,631...202,764,703 		JBrowse link
G Ccl11 C-C motif chemokine ligand 11 multiple interactions
increases expression		 ISO ferric oxide results in increased expression of and results in increased secretion of CCL11 protein; RAG1 promotes the reaction [ferric oxide analog results in increased expression of CCL11 protein] CTD PMID:34982504 PMID:36935073 NCBI chr10:67,028,328...67,032,929
Ensembl chr10:67,028,328...67,032,926 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 increases secretion
increases expression		 ISO
EXP		 ferric oxide results in increased secretion of CCL2 protein
ferric oxide analog results in increased expression of CCL2 mRNA		 CTD PMID:24885771 PMID:38615722 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226 		JBrowse link
G Ccl20 C-C motif chemokine ligand 20 increases expression EXP ferric oxide analog results in increased expression of CCL20 mRNA CTD PMID:38615722 NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629 		JBrowse link
G Ccl22 C-C motif chemokine ligand 22 increases secretion ISO ferric oxide results in increased secretion of CCL22 protein CTD PMID:24885771 NCBI chr19:10,257,602...10,264,373
Ensembl chr19:10,257,601...10,264,400 		JBrowse link
G Ccl3 C-C motif chemokine ligand 3 increases secretion
multiple interactions
increases expression		 ISO ferric oxide results in increased secretion of CCL3 protein
ferric oxide inhibits the reaction [lipopolysaccharide, E coli O55-B5 results in increased secretion of CCL3 protein]
ferric oxide results in increased expression of CCL3 protein		 CTD PMID:24885771 PMID:35872045 PMID:36416909 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938 		JBrowse link
G Ccl4 C-C motif chemokine ligand 4 decreases expression
increases expression
increases secretion		 ISO ferric oxide analog results in decreased expression of CCL4 mRNA
ferric oxide results in increased expression of CCL4 protein
ferric oxide results in increased secretion of CCL4 protein		 CTD PMID:24525745 PMID:24885771 PMID:35872045 NCBI chr10:68,466,394...68,468,229
Ensembl chr10:68,452,052...68,468,231 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 increases expression EXP ferric oxide analog results in increased expression of CCL5 mRNA CTD PMID:38615722 NCBI chr10:68,322,826...68,327,380
Ensembl chr10:68,322,829...68,327,377 		JBrowse link
G Ccl7 C-C motif chemokine ligand 7 increases secretion
increases expression
multiple interactions		 ISO
EXP		 ferric oxide results in increased secretion of CCL7 protein
ferric oxide analog results in increased expression of CCL7 mRNA
ferric oxide results in increased expression of and results in increased secretion of CCL7 protein; RAG1 inhibits the reaction [ferric oxide analog results in increased expression of CCL7 protein]		 CTD PMID:24885771 PMID:34982504 PMID:36935073 PMID:38615722 NCBI chr10:67,016,446...67,018,296
Ensembl chr10:67,016,446...67,018,303 		JBrowse link
G Cd14 CD14 molecule decreases expression ISO ferric oxide analog results in decreased expression of CD14 mRNA CTD PMID:25086211 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261 		JBrowse link
G Cd274 CD274 molecule increases expression ISO ferric oxide analog results in increased expression of CD274 mRNA CTD PMID:25086211 NCBI chr 1:227,116,674...227,137,379
Ensembl chr 1:227,116,649...227,134,450 		JBrowse link
G Cd74 CD74 molecule decreases expression ISO ferric oxide analog results in decreased expression of CD74 mRNA CTD PMID:25086211 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Cd83 CD83 molecule increases expression ISO ferric oxide analog results in increased expression of CD83 mRNA CTD PMID:24525745 PMID:25086211 NCBI chr17:20,887,309...20,907,009
Ensembl chr17:20,887,309...20,907,083 		JBrowse link
G Cdh1 cadherin 1 decreases expression ISO
EXP		 ferric oxide results in decreased expression of CDH1 protein
ferric oxide analog results in decreased expression of CDH1 mRNA		 CTD PMID:34982504 PMID:38615722 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cdhr1 cadherin-related family member 1 increases expression EXP ferric oxide analog results in increased expression of CDHR1 mRNA CTD PMID:38615722 NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A increases expression EXP ferric oxide analog results in increased expression of CDKN1A protein CTD PMID:22995439 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B multiple interactions EXP [ferric oxide analog co-treated with Acrolein] results in decreased expression of CDKN1B protein CTD PMID:24847785 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A decreases expression ISO ferric oxide analog results in decreased expression of CDKN2A mRNA CTD PMID:24525745 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Cep83 centrosomal protein 83 decreases expression ISO ferric oxide analog results in decreased expression of CEP83 mRNA CTD PMID:24525745 NCBI chr 7:29,280,358...29,389,574
Ensembl chr 7:29,280,419...29,389,574 		JBrowse link
G Clec5a C-type lectin domain containing 5A decreases expression ISO ferric oxide analog results in decreased expression of CLEC5A mRNA CTD PMID:25086211 NCBI chr 4:69,407,125...69,416,872
Ensembl chr 4:69,407,835...69,416,859 		JBrowse link
G Clk4 CDC-like kinase 4 increases expression ISO ferric oxide analog results in increased expression of CLK4 mRNA CTD PMID:25086211 NCBI chr10:35,523,382...35,541,387
Ensembl chr10:35,524,755...35,541,352 		JBrowse link
G Cntn3 contactin 3 decreases expression EXP ferric oxide analog results in decreased expression of CNTN3 mRNA CTD PMID:38615722 NCBI chr 4:134,841,268...135,214,460
Ensembl chr 4:134,842,266...135,125,613 		JBrowse link
G Col3a1 collagen type III alpha 1 chain decreases expression EXP ferric oxide analog results in decreased expression of COL3A1 mRNA CTD PMID:38615722 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col6a3 collagen type VI alpha 3 chain increases expression EXP ferric oxide analog results in increased expression of COL6A3 mRNA CTD PMID:38615722 NCBI chr 9:91,361,578...91,439,434
Ensembl chr 9:91,361,583...91,439,471 		JBrowse link
G Col8a1 collagen type VIII alpha 1 chain decreases expression EXP ferric oxide analog results in decreased expression of COL8A1 mRNA CTD PMID:38615722 NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424 		JBrowse link
G Cox6a2 cytochrome c oxidase subunit 6A2 decreases expression ISO ferric oxide analog results in decreased expression of COX6A2 mRNA CTD PMID:25086211 NCBI chr 1:182,788,528...182,790,746
Ensembl chr 1:182,788,528...182,789,274 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 increases expression EXP ferric oxide analog results in increased expression of CRABP2 mRNA CTD PMID:38615722 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379 		JBrowse link
G Csnk1e casein kinase 1, epsilon increases expression ISO ferric oxide analog results in increased expression of CSNK1E mRNA CTD PMID:25086211 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 decreases expression ISO ferric oxide analog results in decreased expression of CX3CR1 mRNA CTD PMID:25086211 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014 		JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 increases expression ISO
EXP		 ferric oxide results in increased expression of CXCL1 protein
ferric oxide analog results in increased expression of CXCL1 mRNA		 CTD PMID:35872045 PMID:38615722 NCBI chr14:17,193,364...17,195,143
Ensembl chr14:17,193,365...17,195,215 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 increases expression EXP ferric oxide analog results in increased expression of CXCL10 mRNA CTD PMID:38615722 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975 		JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 multiple interactions
increases expression		 ISO ferric oxide results in increased expression of and results in increased secretion of CXCL1 protein
ferric oxide results in increased expression of CXCL1 protein		 CTD PMID:34982504 PMID:35872045 NCBI chr14:17,287,727...17,289,451
Ensembl chr14:17,270,146...17,289,511 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 increases expression ISO ferric oxide analog results in increased expression of CXCR4 mRNA CTD PMID:25086211 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 multiple interactions
increases expression		 EXP ferric oxide promotes the reaction [Benzo(a)pyrene results in increased expression of and results in increased activity of CYP1A1 protein]; ferric oxide promotes the reaction [Benzo(a)pyrene results in increased expression of CYP1A1 mRNA]
ferric oxide analog results in increased expression of CYP1A1 mRNA		 CTD PMID:15211619 PMID:38615722 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 increases expression EXP ferric oxide analog results in increased expression of CYP1B1 mRNA CTD PMID:38615722 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 increases expression
decreases expression		 ISO ferric oxide analog results in increased expression of DDIT3 mRNA; ferric oxide analog results in increased expression of DDIT3 protein
ferric oxide analog results in decreased expression of DDIT3 mRNA		 CTD PMID:24525745 PMID:25086211 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201 		JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 decreases expression ISO ferric oxide analog results in decreased expression of DDIT4 mRNA CTD PMID:24525745 NCBI chr20:27,891,989...27,894,088
Ensembl chr20:27,891,998...27,894,105 		JBrowse link
G Dgkg diacylglycerol kinase, gamma decreases expression ISO ferric oxide analog results in decreased expression of DGKG mRNA CTD PMID:25086211 NCBI chr11:78,384,212...78,579,158
Ensembl chr11:78,384,458...78,577,212 		JBrowse link
G Dock3 dedicator of cyto-kinesis 3 increases expression EXP ferric oxide analog results in increased expression of DOCK3 mRNA CTD PMID:38615722 NCBI chr 8:107,552,462...107,903,527
Ensembl chr 8:107,552,463...107,903,514 		JBrowse link
G Dusp1 dual specificity phosphatase 1 decreases expression ISO ferric oxide analog results in decreased expression of DUSP1 mRNA CTD PMID:25086211 NCBI chr10:16,680,478...16,683,275 JBrowse link
G Dusp4 dual specificity phosphatase 4 increases expression ISO ferric oxide analog results in increased expression of DUSP4 mRNA CTD PMID:25086211 NCBI chr16:57,376,659...57,398,161
Ensembl chr16:57,377,229...57,398,138 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 decreases expression ISO ferric oxide analog results in decreased expression of EEF1A1 mRNA CTD PMID:25086211 NCBI chr 8:79,341,554...79,344,784
Ensembl chr 8:79,341,557...79,344,839 		JBrowse link
G Egfr epidermal growth factor receptor increases phosphorylation ISO ferric oxide analog results in increased phosphorylation of EGFR protein CTD PMID:24068039 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Egr1 early growth response 1 decreases expression ISO ferric oxide analog results in decreased expression of EGR1 mRNA CTD PMID:25086211 NCBI chr18:26,462,967...26,466,766
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Egr2 early growth response 2 increases expression ISO ferric oxide analog results in increased expression of EGR2 mRNA CTD PMID:24525745 PMID:25086211 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 decreases expression ISO ferric oxide analog results in decreased expression of EIF2AK2 mRNA CTD PMID:25086211 NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971 		JBrowse link
G Eno2 enolase 2 increases expression
decreases expression		 ISO ferric oxide analog results in increased expression of ENO2 mRNA
ferric oxide analog results in decreased expression of ENO2 mRNA		 CTD PMID:24525745 PMID:25086211 NCBI chr 4:157,572,085...157,580,971
Ensembl chr 4:157,572,088...157,580,980 		JBrowse link
G Epn2 epsin 2 increases expression ISO ferric oxide analog results in increased expression of EPN2 mRNA CTD PMID:25086211 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642 		JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 multiple interactions ISO ferric oxide analog results in increased expression of and results in increased phosphorylation of ERN1 protein CTD PMID:25086211 NCBI chr10:91,326,889...91,421,201
Ensembl chr10:91,330,654...91,421,029 		JBrowse link
G Esm1 endothelial cell-specific molecule 1 increases expression EXP ferric oxide analog results in increased expression of ESM1 mRNA CTD PMID:38615722 NCBI chr 2:44,876,067...44,884,805
Ensembl chr 2:44,876,067...44,884,804 		JBrowse link
G Fblim1 filamin binding LIM protein 1 increases expression ISO ferric oxide analog results in increased expression of FBLIM1 mRNA CTD PMID:25086211 NCBI chr 5:153,883,945...153,915,524
Ensembl chr 5:153,883,960...153,913,757 		JBrowse link
G Filip1 filamin A interacting protein 1 increases expression EXP ferric oxide analog results in increased expression of FILIP1 mRNA CTD PMID:38615722 NCBI chr 8:80,761,283...80,956,556
Ensembl chr 8:80,764,604...80,922,549 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit decreases expression
increases expression		 ISO ferric oxide analog results in decreased expression of FOS mRNA
ferric oxide analog results in increased expression of FOS mRNA		 CTD PMID:24525745 PMID:25086211 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036 		JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit increases expression EXP ferric oxide analog results in increased expression of FOSB mRNA CTD PMID:38615722 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit increases expression EXP ferric oxide analog results in increased expression of FOSL1 mRNA CTD PMID:38615722 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930 		JBrowse link
G Fus Fus RNA binding protein decreases expression ISO ferric oxide analog results in decreased expression of FUS mRNA CTD PMID:25086211 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Fyb1 FYN binding protein 1 decreases expression ISO ferric oxide analog results in decreased expression of FYB1 mRNA CTD PMID:25086211 NCBI chr 2:55,621,585...55,781,206
Ensembl chr 2:55,632,698...55,779,629 		JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha increases phosphorylation EXP ferric oxide analog results in increased phosphorylation of GADD45A protein CTD PMID:22995439 NCBI chr 4:96,154,789...96,157,091
Ensembl chr 4:96,154,789...96,157,115 		JBrowse link
G Gadd45b growth arrest and DNA-damage-inducible, beta increases expression ISO ferric oxide analog results in increased expression of GADD45B mRNA CTD PMID:25086211 NCBI chr 7:8,778,004...8,780,306
Ensembl chr 7:8,778,007...8,780,046 		JBrowse link
G Gbp2 guanylate binding protein 2 increases expression EXP ferric oxide analog results in increased expression of GBP2 mRNA CTD PMID:38615722 NCBI chr 2:231,332,488...231,348,573
Ensembl chr 2:231,332,284...231,348,571 		JBrowse link
G Gja1 gap junction protein, alpha 1 increases expression ISO ferric oxide analog results in increased expression of GJA1 mRNA CTD PMID:25086211 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gpnmb glycoprotein nmb increases expression EXP ferric oxide analog results in increased expression of GPNMB mRNA CTD PMID:38615722 NCBI chr 4:78,010,247...78,031,491
Ensembl chr 4:78,010,197...78,049,367 		JBrowse link
G Gpr183 G protein-coupled receptor 183 increases expression ISO ferric oxide analog results in increased expression of GPR183 mRNA CTD PMID:24525745 NCBI chr15:99,037,764...99,050,550
Ensembl chr15:99,036,367...99,050,559 		JBrowse link
G Gpr84 G protein-coupled receptor 84 decreases expression
increases expression		 ISO ferric oxide analog results in decreased expression of GPR84 mRNA
ferric oxide analog results in increased expression of GPR84 mRNA		 CTD PMID:24525745 PMID:25086211 NCBI chr 7:134,443,904...134,446,173
Ensembl chr 7:134,443,936...134,446,178 		JBrowse link
G Gsr glutathione-disulfide reductase multiple interactions ISO [Benzo(a)pyrene co-treated with ferric oxide] results in increased activity of GSR protein CTD PMID:11033230 NCBI chr16:58,482,209...58,525,256
Ensembl chr16:58,482,505...58,525,661 		JBrowse link
G Gsta1 glutathione S-transferase alpha 1 increases expression EXP ferric oxide analog results in increased expression of GSTA1 mRNA CTD PMID:38615722 NCBI chr 9:23,703,476...23,720,121
Ensembl chr 9:23,703,477...23,720,121 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 increases expression EXP ferric oxide analog results in increased expression of GSTP1 mRNA CTD PMID:38615722 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226 		JBrowse link
G H2ax H2A.X variant histone multiple interactions
increases expression		 ISO Oxygen deficiency inhibits the reaction [ferric oxide analog results in increased expression of H2AX protein] CTD PMID:27270449 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 		JBrowse link
G H2bc8 H2B clustered histone 8 decreases expression ISO ferric oxide analog results in decreased expression of H2BC7 mRNA CTD PMID:24525745 PMID:25086211 NCBI chr17:42,708,658...42,709,408 JBrowse link
G H2bc9 H2B clustered histone 9 decreases expression ISO ferric oxide analog results in decreased expression of H2BC9 mRNA CTD PMID:24525745 PMID:25086211 NCBI chr17:42,470,593...42,478,590 JBrowse link
G H3c1 H3 clustered histone 1 decreases expression ISO ferric oxide analog results in decreased expression of H3C1 mRNA CTD PMID:25086211 NCBI chr17:41,368,379...41,368,902
Ensembl chr17:41,368,386...41,368,856
Ensembl chr17:41,368,386...41,368,856
Ensembl chr17:41,368,386...41,368,856
Ensembl chr17:41,368,386...41,368,856 		JBrowse link
G Hbegf heparin-binding EGF-like growth factor increases expression ISO ferric oxide analog results in increased expression of HBEGF mRNA CTD PMID:25086211 NCBI chr18:28,106,284...28,116,167
Ensembl chr18:28,105,760...28,116,441 		JBrowse link
G Heatr3 HEAT repeat containing 3 decreases expression ISO ferric oxide analog results in decreased expression of HEATR3 mRNA CTD PMID:25086211 NCBI chr19:18,892,477...18,930,502
Ensembl chr19:18,893,144...18,930,509 		JBrowse link
G Hebp1 heme binding protein 1 increases expression ISO ferric oxide analog results in increased expression of HEBP1 mRNA CTD PMID:25086211 NCBI chr 4:167,974,316...168,003,854
Ensembl chr 4:167,974,319...168,003,854 		JBrowse link
G Hilpda hypoxia inducible lipid droplet-associated increases expression ISO ferric oxide analog results in increased expression of HILPDA mRNA CTD PMID:25086211 NCBI chr 4:57,871,088...57,874,048
Ensembl chr 4:57,871,110...57,874,557 		JBrowse link
G Hist1h2ail1 histone cluster 1 H2a family member I like 1 decreases expression ISO ferric oxide analog results in decreased expression of H3C6 mRNA CTD PMID:25086211 NCBI chr17:41,568,181...41,569,093
Ensembl chr17:41,568,471...41,569,109 		JBrowse link
G Hist1h2bc histone cluster 1, H2bc increases expression ISO ferric oxide analog results in increased expression of H2BC21 mRNA CTD PMID:25086211 NCBI chr17:42,692,335...42,696,601
Ensembl chr17:42,694,723...42,696,642 		JBrowse link
G Hist1h4b histone cluster 1 H4 family member B decreases expression EXP ferric oxide analog results in decreased expression of HIST1H4B mRNA CTD PMID:38615722 NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370 		JBrowse link
G Hist2h2be histone cluster 2 H2B family member E decreases expression ISO ferric oxide analog results in decreased expression of H2BC11 mRNA CTD PMID:25086211 NCBI chr 2:183,780,583...183,783,030 JBrowse link
G Hmox1 heme oxygenase 1 increases expression ISO
EXP		 ferric oxide analog results in increased expression of HMOX1 mRNA CTD PMID:24525745 PMID:25086211 PMID:38615722 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 increases expression EXP ferric oxide analog results in increased expression of HSD11B1 mRNA CTD PMID:38615722 NCBI chr13:104,728,539...104,798,884
Ensembl chr13:104,728,539...104,788,687 		JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 increases expression ISO ferric oxide analog results in increased expression of HSD3B7 mRNA CTD PMID:25086211 NCBI chr 1:182,412,216...182,415,447
Ensembl chr 1:182,412,151...182,415,442 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of HSPA1A mRNA CTD PMID:20540983 NCBI chr20:3,870,765...3,873,221
Ensembl chr20:3,856,006...3,873,227 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of HSPA8 mRNA CTD PMID:20540983 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 decreases expression ISO ferric oxide results in decreased expression of HSPD1 protein CTD PMID:28077287 NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662 		JBrowse link
G Hyal1 hyaluronidase 1 increases expression
decreases expression		 ISO ferric oxide analog results in increased expression of HYAL1 mRNA
ferric oxide analog results in decreased expression of HYAL1 mRNA		 CTD PMID:24525745 PMID:25086211 NCBI chr 8:108,250,668...108,254,519
Ensembl chr 8:108,250,667...108,260,210 		JBrowse link
G Icam1 intercellular adhesion molecule 1 increases expression ISO ferric oxide results in increased expression of ICAM1 protein CTD PMID:21439359 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438 		JBrowse link
G Icam2 intercellular adhesion molecule 2 decreases expression ISO ferric oxide analog results in decreased expression of ICAM2 mRNA CTD PMID:25086211 NCBI chr10:91,308,608...91,319,536
Ensembl chr10:91,308,538...91,315,293 		JBrowse link
G Id1 inhibitor of DNA binding 1 increases expression ISO ferric oxide analog results in increased expression of ID1 mRNA CTD PMID:24525745 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419 		JBrowse link
G Id3 inhibitor of DNA binding 3 increases expression ISO ferric oxide analog results in increased expression of ID3 mRNA CTD PMID:24525745 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349 		JBrowse link
G Il10ra interleukin 10 receptor subunit alpha decreases expression ISO ferric oxide analog results in decreased expression of IL10RA mRNA CTD PMID:25086211 NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061 		JBrowse link
G Il12b interleukin 12B multiple interactions ISO ferric oxide inhibits the reaction [lipopolysaccharide, E coli O55-B5 results in increased secretion of IL12B protein] CTD PMID:36416909 NCBI chr10:28,888,832...28,903,802
Ensembl chr10:28,893,008...28,902,903 		JBrowse link
G Il13 interleukin 13 multiple interactions
increases expression		 ISO RAG1 promotes the reaction [ferric oxide analog results in increased expression of IL13 protein] CTD PMID:36935073 NCBI chr10:37,790,130...37,792,687
Ensembl chr10:37,790,130...37,792,737 		JBrowse link
G Il17a interleukin 17A multiple interactions ISO ferric oxide results in increased expression of and results in increased secretion of IL17A protein CTD PMID:34982504 NCBI chr 9:23,144,402...23,147,889
Ensembl chr 9:23,144,402...23,147,889 		JBrowse link
G Il1b interleukin 1 beta increases secretion ISO ferric oxide analog results in increased secretion of IL1B protein
ferric oxide results in increased secretion of IL1B protein		 CTD PMID:24525745 PMID:24885771 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Il1rl2 interleukin 1 receptor-like 2 increases expression EXP ferric oxide analog results in increased expression of IL1RL2 mRNA CTD PMID:38615722 NCBI chr 9:42,591,658...42,639,351
Ensembl chr 9:42,591,934...42,636,667 		JBrowse link
G Il2 interleukin 2 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of IL2 protein CTD PMID:20540983 NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566 		JBrowse link
G Il33 interleukin 33 multiple interactions ISO ferric oxide results in increased expression of and results in increased secretion of IL33 protein CTD PMID:34982504 NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373 		JBrowse link
G Il4 interleukin 4 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of IL4 protein; ferric oxide inhibits the reaction [Ovalbumin results in increased expression of IL4 protein] CTD PMID:20540983 PMID:23147377 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Il4i1 interleukin 4 induced 1 decreases expression ISO ferric oxide analog results in decreased expression of IL4I1 mRNA CTD PMID:25086211 NCBI chr 1:95,299,457...95,324,564
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Il5 interleukin 5 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of IL5 protein; ferric oxide results in increased expression of and results in increased secretion of IL5 protein CTD PMID:20540983 PMID:34982504 NCBI chr10:37,874,342...37,877,213
Ensembl chr10:37,874,342...37,877,213 		JBrowse link
G Il6 interleukin 6 multiple interactions
increases expression
increases secretion		 ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of IL6 protein; RAG1 promotes the reaction [ferric oxide analog results in increased expression of IL6 protein]
ferric oxide results in increased secretion of IL6 protein
ferric oxide analog results in increased secretion of IL6 protein		 CTD PMID:20540983 PMID:24525745 PMID:24885771 PMID:36935073 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Irf7 interferon regulatory factor 7 decreases expression ISO ferric oxide analog results in decreased expression of IRF7 mRNA CTD PMID:25086211 NCBI chr 1:196,367,380...196,370,943
Ensembl chr 1:196,367,361...196,370,832 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit increases phosphorylation EXP ferric oxide analog results in increased phosphorylation of JUN protein CTD PMID:22995439 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Klf2 KLF transcription factor 2 decreases expression ISO ferric oxide analog results in decreased expression of KLF2 mRNA CTD PMID:25086211 NCBI chr16:17,521,107...17,523,739
Ensembl chr16:17,514,552...17,523,944 		JBrowse link
G Klf4 KLF transcription factor 4 decreases expression ISO ferric oxide analog results in decreased expression of KLF4 mRNA CTD PMID:25086211 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G Klhl31 kelch-like family member 31 increases expression EXP ferric oxide analog results in increased expression of KLHL31 mRNA CTD PMID:38615722 NCBI chr 8:78,515,514...78,538,873
Ensembl chr 8:78,515,514...78,538,873 		JBrowse link
G Lama3 laminin subunit alpha 3 increases expression EXP ferric oxide analog results in increased expression of LAMA3 mRNA CTD PMID:38615722 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353 		JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 multiple interactions EXP [ferric oxide analog co-treated with Acrolein] results in decreased expression of LAMP1 protein CTD PMID:24847785 NCBI chr16:76,355,982...76,380,700
Ensembl chr16:76,355,984...76,381,883 		JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 increases expression ISO ferric oxide analog results in increased expression of LAMP2 protein CTD PMID:25086211 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522 		JBrowse link
G Lgals3 galectin 3 increases expression EXP ferric oxide analog results in increased expression of LGALS3 mRNA CTD PMID:38615722 NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025 		JBrowse link
G Lilrb4 leukocyte immunoglobulin like receptor B4 decreases expression ISO ferric oxide analog results in decreased expression of LILRB4B mRNA CTD PMID:24525745 NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660 		JBrowse link
G Lima1 LIM domain and actin binding 1 increases expression ISO ferric oxide analog results in increased expression of LIMA1 mRNA CTD PMID:25086211 NCBI chr 7:130,901,717...131,001,512
Ensembl chr 7:130,901,717...131,001,473 		JBrowse link
G Lims2 LIM zinc finger domain containing 2 increases expression ISO ferric oxide analog results in increased expression of LIMS2 mRNA CTD PMID:25086211 NCBI chr18:23,553,937...23,592,137
Ensembl chr18:23,553,937...23,592,137 		JBrowse link
G LOC120095805 U6 spliceosomal RNA decreases expression ISO ferric oxide analog results in decreased expression of RNU6 mRNA CTD PMID:24525745 NCBI chr11:16,655,090...16,655,196
Ensembl chr11:16,655,090...16,655,196 		JBrowse link
G Loxl4 lysyl oxidase-like 4 increases expression EXP ferric oxide analog results in increased expression of LOXL4 mRNA CTD PMID:38615722 NCBI chr 1:241,396,183...241,416,385
Ensembl chr 1:241,397,983...241,416,322 		JBrowse link
G Lst1 leukocyte specific transcript 1 decreases expression ISO ferric oxide analog results in decreased expression of LST1 mRNA CTD PMID:24525745 NCBI chr20:3,634,680...3,639,731
Ensembl chr20:3,634,749...3,637,997 		JBrowse link
G Ly6a lymphocyte antigen 6 family member A decreases expression ISO ferric oxide analog results in decreased expression of LY6A mRNA CTD PMID:24525745 NCBI chr 7:107,177,191...107,189,436
Ensembl chr 7:107,183,469...107,189,981 		JBrowse link
G Lypd6 Ly6/Plaur domain containing 6 decreases expression EXP ferric oxide analog results in decreased expression of LYPD6 mRNA CTD PMID:38615722 NCBI chr 3:34,487,425...34,632,887
Ensembl chr 3:34,496,485...34,630,308 		JBrowse link
G Lyz2 lysozyme 2 decreases expression ISO ferric oxide analog results in decreased expression of LYZ2 mRNA CTD PMID:25086211 NCBI chr 7:52,906,810...52,912,154
Ensembl chr 7:52,906,811...52,912,106 		JBrowse link
G Mafb MAF bZIP transcription factor B increases expression ISO ferric oxide analog results in increased expression of MAFB mRNA CTD PMID:24525745 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031 		JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha increases expression ISO ferric oxide analog results in increased expression of MAP1LC3A protein CTD PMID:25086211 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670 		JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta increases expression ISO ferric oxide analog results in increased expression of MAP1LC3B protein CTD PMID:24068039 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 increases phosphorylation
multiple interactions		 ISO
EXP		 ferric oxide analog results in increased phosphorylation of MAPK1 protein
[ferric oxide analog co-treated with Acrolein] results in increased phosphorylation of MAPK1 protein		 CTD PMID:24068039 PMID:24847785 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 increases phosphorylation
multiple interactions		 ISO
EXP		 ferric oxide analog results in increased phosphorylation of MAPK3 protein
[ferric oxide analog co-treated with Acrolein] results in increased phosphorylation of MAPK3 protein		 CTD PMID:24068039 PMID:24847785 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Mat2a methionine adenosyltransferase 2A decreases expression
increases expression		 ISO ferric oxide analog results in decreased expression of MAT2A mRNA
ferric oxide analog results in increased expression of MAT2A mRNA		 CTD PMID:24525745 PMID:25086211 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Mef2c myocyte enhancer factor 2C decreases expression ISO ferric oxide analog results in decreased expression of MEF2C mRNA CTD PMID:25086211 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Megf6 multiple EGF-like-domains 6 decreases expression EXP ferric oxide analog results in decreased expression of MEGF6 mRNA CTD PMID:38615722 NCBI chr 5:164,738,272...164,839,142
Ensembl chr 5:164,738,352...164,839,139 		JBrowse link
G Mgst1 microsomal glutathione S-transferase 1 increases expression EXP ferric oxide analog results in increased expression of MGST1 mRNA CTD PMID:38615722 NCBI chr 4:171,029,666...171,044,893
Ensembl chr 4:171,029,630...171,044,892 		JBrowse link
G Mmp12 matrix metallopeptidase 12 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of MMP12 mRNA CTD PMID:20540983 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611 		JBrowse link
G Mmp19 matrix metallopeptidase 19 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of MMP19 mRNA CTD PMID:20540983 NCBI chr 7:1,221,229...1,229,555
Ensembl chr 7:1,221,343...1,229,555 		JBrowse link
G Mmp2 matrix metallopeptidase 2 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of MMP2 mRNA CTD PMID:20540983 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Mmp23 matrix metallopeptidase 23 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of MMP23 mRNA CTD PMID:20540983 NCBI chr 5:166,239,643...166,242,734
Ensembl chr 5:166,239,644...166,242,433 		JBrowse link
G Mmp7 matrix metallopeptidase 7 increases expression ISO ferric oxide results in increased expression of MMP7 protein CTD PMID:24885771 NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902 		JBrowse link
G Mmp9 matrix metallopeptidase 9 increases expression EXP ferric oxide analog results in increased expression of MMP9 mRNA CTD PMID:38615722 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
G Mnda myeloid cell nuclear differentiation antigen increases expression EXP ferric oxide analog results in increased expression of MNDA mRNA CTD PMID:38615722 NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201 		JBrowse link
G Msmb microseminoprotein, beta affects expression ISO ferric oxide affects the expression of MSMB mRNA CTD PMID:28077287 NCBI chr16:7,366,536...7,387,124
Ensembl chr16:7,366,536...7,387,123 		JBrowse link
G Mt2A metallothionein 2A increases expression EXP ferric oxide analog results in increased expression of MT2A mRNA CTD PMID:38615722 NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor multiple interactions
increases expression		 ISO oxidized-L-alpha-1-palmitoyl-2-arachidonoyl-sn-glycero-3-phosphorylcholine inhibits the reaction [ferric oxide results in increased expression of MYD88 protein]
ferric oxide analog results in increased expression of MYD88 mRNA; ferric oxide analog results in increased expression of MYD88 protein; ferric oxide results in increased expression of MYD88 mRNA; ferric oxide results in increased expression of MYD88 protein		 CTD PMID:34982504 PMID:36935073 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415 		JBrowse link
G N4bp3 Nedd4 binding protein 3 decreases expression EXP ferric oxide analog results in decreased expression of N4BP3 mRNA CTD PMID:38615722 NCBI chr10:35,898,031...35,906,704
Ensembl chr10:35,899,096...35,907,001 		JBrowse link
G Naa80 N(alpha)-acetyltransferase 80, NatH catalytic subunit increases expression ISO ferric oxide analog results in increased expression of NAA80 mRNA CTD PMID:25086211 NCBI chr 8:108,254,314...108,257,564
Ensembl chr 8:108,253,302...108,257,563 		JBrowse link
G Nckap5l NCK-associated protein 5-like decreases expression ISO ferric oxide analog results in decreased expression of NCKAP5L mRNA CTD PMID:24525745 NCBI chr 7:130,553,683...130,591,886
Ensembl chr 7:130,555,368...130,591,857 		JBrowse link
G Ndrg1 N-myc downstream regulated 1 increases expression ISO ferric oxide analog results in increased expression of NDRG1 mRNA CTD PMID:25086211 NCBI chr 7:98,684,487...98,725,869
Ensembl chr 7:98,684,487...98,725,880 		JBrowse link
G Nedd9 neural precursor cell expressed, developmentally down-regulated 9 increases expression ISO ferric oxide analog results in increased expression of NEDD9 mRNA CTD PMID:24525745 NCBI chr17:23,289,793...23,468,026
Ensembl chr17:23,282,326...23,468,019 		JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 increases expression EXP ferric oxide analog results in increased expression of NFATC2 mRNA CTD PMID:38615722 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 increases expression ISO ferric oxide results in increased expression of NFKB1 mRNA CTD PMID:34982504 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404 		JBrowse link
G Nox4 NADPH oxidase 4 increases expression ISO ferric oxide results in increased expression of NOX4 protein CTD PMID:28077287 PMID:28993115 NCBI chr 1:140,900,886...141,078,844
Ensembl chr 1:140,901,097...141,077,406 		JBrowse link
G Npm3 nucleophosmin/nucleoplasmin, 3 decreases expression ISO ferric oxide analog results in decreased expression of NPM3 mRNA CTD PMID:25086211 NCBI chr 1:244,595,638...244,597,623
Ensembl chr 1:244,595,644...244,597,591 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 increases expression EXP ferric oxide analog results in increased expression of NQO1 mRNA CTD PMID:38615722 NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557 		JBrowse link
G Nrp1 neuropilin 1 decreases expression ISO ferric oxide analog results in decreased expression of NRP1 mRNA CTD PMID:25086211 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633 		JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 increases expression EXP ferric oxide analog results in increased expression of NSG1 mRNA CTD PMID:38615722 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II increases expression ISO ferric oxide analog results in increased expression of NT5C2 mRNA CTD PMID:24525745 NCBI chr 1:245,770,993...245,896,925
Ensembl chr 1:245,772,277...245,897,913 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator decreases expression ISO ferric oxide analog results in decreased expression of NUPR1 mRNA CTD PMID:24525745 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281 		JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 decreases expression ISO ferric oxide analog results in decreased expression of OAS2 mRNA CTD PMID:25086211 NCBI chr12:35,802,824...35,830,778
Ensembl chr12:35,806,759...35,829,371 		JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like decreases expression ISO ferric oxide analog results in decreased expression of OASL1 mRNA CTD PMID:25086211 NCBI chr12:41,682,900...41,695,641
Ensembl chr12:41,682,900...41,695,641 		JBrowse link
G Osgin1 oxidative stress induced growth inhibitor 1 increases expression EXP ferric oxide analog results in increased expression of OSGIN1 mRNA CTD PMID:38615722 NCBI chr19:47,471,750...47,500,517
Ensembl chr19:47,492,171...47,500,516 		JBrowse link
G Pamr1 peptidase domain containing associated with muscle regeneration 1 increases expression EXP ferric oxide analog results in increased expression of PAMR1 mRNA CTD PMID:38615722 NCBI chr 3:88,889,061...88,988,615
Ensembl chr 3:88,889,046...88,988,606 		JBrowse link
G Pappa pappalysin increases expression EXP ferric oxide analog results in increased expression of PAPPA mRNA CTD PMID:38615722 NCBI chr 5:78,497,660...78,735,873
Ensembl chr 5:78,498,300...78,730,666 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 increases cleavage
multiple interactions		 ISO ferric oxide analog results in increased cleavage of PARP1 protein
ferric oxide results in increased cleavage of PARP1 protein
ferric oxide results in decreased expression of and results in increased cleavage of PARP1 protein		 CTD PMID:26991130 PMID:27270449 PMID:28993115 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pate4 prostate and testis expressed 4 affects expression ISO ferric oxide affects the expression of PATE4 mRNA CTD PMID:28077287 NCBI chr 8:33,988,812...33,991,552
Ensembl chr 8:33,988,812...33,991,552
Ensembl chr 8:33,988,812...33,991,552 		JBrowse link
G Pcdh7 protocadherin 7 decreases expression ISO ferric oxide analog results in decreased expression of PCDH7 mRNA CTD PMID:25086211 NCBI chr14:52,471,801...52,901,696
Ensembl chr14:52,475,610...52,902,051
Ensembl chr14:52,475,610...52,902,051 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 decreases expression EXP ferric oxide analog results in decreased expression of PCSK5 mRNA CTD PMID:38615722 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600 		JBrowse link
G Pde2a phosphodiesterase 2A decreases expression EXP ferric oxide analog results in decreased expression of PDE2A mRNA CTD PMID:38615722 NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434 		JBrowse link
G Per2 period circadian regulator 2 increases expression ISO ferric oxide analog results in increased expression of PER2 mRNA CTD PMID:25086211 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 decreases expression ISO ferric oxide analog results in decreased expression of PES1 mRNA CTD PMID:25086211 NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134 		JBrowse link
G Phlda1 pleckstrin homology-like domain, family A, member 1 increases expression ISO ferric oxide analog results in increased expression of PHLDA1 mRNA CTD PMID:25086211 NCBI chr 7:46,967,433...46,969,637
Ensembl chr 7:46,967,409...46,969,861 		JBrowse link
G Pla2g7 phospholipase A2 group VII increases expression EXP ferric oxide analog results in increased expression of PLA2G7 mRNA CTD PMID:38615722 NCBI chr 9:17,362,214...17,404,476
Ensembl chr 9:17,362,225...17,404,476 		JBrowse link
G Plekhf1 pleckstrin homology and FYVE domain containing 1 increases expression ISO ferric oxide analog results in increased expression of PLEKHF1 mRNA CTD PMID:25086211 NCBI chr 1:90,908,304...90,915,862
Ensembl chr 1:90,904,742...90,915,820 		JBrowse link
G Plk2 polo-like kinase 2 increases expression ISO ferric oxide analog results in increased expression of PLK2 mRNA CTD PMID:25086211 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947 		JBrowse link
G Plk3 polo-like kinase 3 increases expression ISO ferric oxide analog results in increased expression of PLK3 mRNA CTD PMID:25086211 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317 		JBrowse link
G Plpbp pyridoxal phosphate binding protein increases expression ISO ferric oxide analog results in increased expression of PLPBP mRNA CTD PMID:25086211 NCBI chr16:65,003,292...65,014,886
Ensembl chr16:65,002,223...65,014,886 		JBrowse link
G Plppr4 phospholipid phosphatase related 4 decreases expression EXP ferric oxide analog results in decreased expression of PLPPR4 mRNA CTD PMID:38615722 NCBI chr 2:205,371,317...205,412,302
Ensembl chr 2:205,371,322...205,412,302 		JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E increases expression EXP ferric oxide analog results in increased expression of PPM1E mRNA CTD PMID:38615722 NCBI chr10:72,051,643...72,187,439
Ensembl chr10:72,055,208...72,187,282 		JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A decreases expression ISO ferric oxide analog results in decreased expression of PPP1R15A mRNA CTD PMID:24525745 NCBI chr 1:96,000,053...96,003,128
Ensembl chr 1:96,000,058...96,003,171 		JBrowse link
G Prf1 perforin 1 decreases expression ISO ferric oxide analog results in decreased expression of PRF1 mRNA CTD PMID:24525745 NCBI chr20:29,246,202...29,251,712
Ensembl chr20:29,246,202...29,251,701 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 decreases expression ISO ferric oxide analog results in decreased expression of PRMT6 mRNA CTD PMID:25086211 NCBI chr 2:197,927,750...197,932,760
Ensembl chr 2:197,927,220...197,933,648 		JBrowse link
G Prr18 proline rich 18 increases expression ISO ferric oxide analog results in increased expression of PRR18 mRNA CTD PMID:25086211 NCBI chr 1:52,400,215...52,403,998
Ensembl chr 1:52,400,215...52,404,309 		JBrowse link
G Prr33 proline rich 33 decreases expression ISO ferric oxide analog results in decreased expression of PRR33 mRNA CTD PMID:25086211 NCBI chr 1:197,644,903...197,650,774
Ensembl chr 1:197,644,902...197,650,714 		JBrowse link
G Ptgr1 prostaglandin reductase 1 increases expression EXP ferric oxide analog results in increased expression of PTGR1 mRNA CTD PMID:38615722 NCBI chr 5:73,784,000...73,802,624
Ensembl chr 5:73,784,009...73,802,666 		JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 increases expression EXP ferric oxide analog results in increased expression of PTGS1 mRNA CTD PMID:38615722 NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586 		JBrowse link
G Rab15 RAB15, member RAS oncogene family increases expression ISO ferric oxide analog results in increased expression of RAB15 mRNA CTD PMID:25086211 NCBI chr 6:95,499,584...95,524,073
Ensembl chr 6:95,499,587...95,523,942 		JBrowse link
G Rad50 RAD50 double strand break repair protein decreases expression ISO ferric oxide analog results in decreased expression of RAD50 mRNA CTD PMID:24525745 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rag1 recombination activating 1 multiple interactions ISO RAG1 inhibits the reaction [ferric oxide analog results in increased expression of CCL7 protein]; RAG1 promotes the reaction [ferric oxide analog results in increased expression of CCL11 protein]; RAG1 promotes the reaction [ferric oxide analog results in increased expression of IL13 protein]; RAG1 promotes the reaction [ferric oxide analog results in increased expression of IL6 protein]; RAG1 promotes the reaction [ferric oxide analog results in increased expression of TNF protein] CTD PMID:36935073 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rbak RB-associated KRAB zinc finger increases expression ISO ferric oxide analog results in increased expression of RBAK mRNA CTD PMID:24525745 NCBI chr12:11,375,314...11,388,937
Ensembl chr12:11,375,318...11,388,934 		JBrowse link
G Rcan1 regulator of calcineurin 1 increases expression ISO ferric oxide analog results in increased expression of RCAN1 mRNA CTD PMID:25086211 NCBI chr11:31,622,208...31,702,150
Ensembl chr11:31,622,210...31,702,045 		JBrowse link
G Rcbtb2 RCC1 and BTB domain containing protein 2 increases expression ISO ferric oxide analog results in increased expression of RCBTB2 mRNA CTD PMID:24525745 NCBI chr15:48,319,809...48,364,441
Ensembl chr15:48,323,866...48,383,750 		JBrowse link
G Rgs16 regulator of G-protein signaling 16 increases expression EXP ferric oxide analog results in increased expression of RGS16 mRNA CTD PMID:38615722 NCBI chr13:65,887,668...65,892,862
Ensembl chr13:65,887,530...65,892,857 		JBrowse link
G Rilpl1 Rab interacting lysosomal protein-like 1 decreases expression ISO ferric oxide analog results in decreased expression of RILPL1 mRNA CTD PMID:24525745 NCBI chr12:32,071,870...32,109,687
Ensembl chr12:32,071,693...32,109,938 		JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 multiple interactions EXP [ferric oxide analog co-treated with Acrolein] results in increased expression of RIPK1 protein CTD PMID:24847785 NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824 		JBrowse link
G Ripk3 receptor-interacting serine-threonine kinase 3 multiple interactions EXP [ferric oxide analog co-treated with Acrolein] results in increased expression of RIPK3 protein CTD PMID:24847785 NCBI chr15:29,283,153...29,292,107
Ensembl chr15:29,283,145...29,292,121 		JBrowse link
G RT1-A2 RT1 class Ia, locus A2 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of H2-T23 mRNA CTD PMID:20540983 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-Db1 RT1 class II, locus Db1 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of H2-EB1 mRNA CTD PMID:20540983 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G Rusc2 RUN and SH3 domain containing 2 increases expression ISO ferric oxide analog results in increased expression of RUSC2 mRNA CTD PMID:25086211 NCBI chr 5:57,628,397...57,675,524
Ensembl chr 5:57,629,904...57,675,524 		JBrowse link
G Samd9l sterile alpha motif domain containing 9 like decreases expression ISO ferric oxide analog results in decreased expression of SAMD9L mRNA CTD PMID:25086211 NCBI chr 4:31,362,054...31,376,412
Ensembl chr 4:31,361,669...31,376,415 		JBrowse link
G Scara5 scavenger receptor class A, member 5 increases expression EXP ferric oxide analog results in increased expression of SCARA5 mRNA CTD PMID:38615722 NCBI chr15:39,880,017...39,985,007
Ensembl chr15:39,880,035...39,983,373 		JBrowse link
G Sema3a semaphorin 3A increases expression EXP ferric oxide analog results in increased expression of SEMA3A mRNA CTD PMID:38615722 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432 		JBrowse link
G Sema3d semaphorin 3D decreases expression EXP ferric oxide analog results in decreased expression of SEMA3D mRNA CTD PMID:38615722 NCBI chr 4:22,316,769...22,505,930
Ensembl chr 4:22,316,779...22,505,930 		JBrowse link
G Serpinb1a serpin family B member 1A decreases expression ISO ferric oxide analog results in decreased expression of SERPINB1A mRNA CTD PMID:24525745 NCBI chr17:31,590,695...31,599,102
Ensembl chr17:31,590,677...31,599,102 		JBrowse link
G Skil SKI-like proto-oncogene increases expression ISO ferric oxide analog results in increased expression of SKIL mRNA CTD PMID:24525745 NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080 		JBrowse link
G Slamf8 SLAM family member 8 increases expression ISO ferric oxide analog results in increased expression of SLAMF8 mRNA CTD PMID:24525745 NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 increases expression ISO ferric oxide analog results in increased expression of SLC11A1 mRNA CTD PMID:25086211 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Slc30a3 solute carrier family 30 member 3 increases expression EXP ferric oxide analog results in increased expression of SLC30A3 mRNA CTD PMID:38615722 NCBI chr 6:25,264,310...25,284,720
Ensembl chr 6:25,275,528...25,284,720 		JBrowse link
G Slc46a3 solute carrier family 46, member 3 decreases expression ISO ferric oxide analog results in decreased expression of SLC46A3 mRNA CTD PMID:25086211 NCBI chr12:7,140,610...7,157,093
Ensembl chr12:7,140,668...7,157,092 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 decreases expression EXP ferric oxide analog results in decreased expression of SLC7A5 mRNA CTD PMID:38615722 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823 		JBrowse link
G Slco2a1 solute carrier organic anion transporter family, member 2a1 increases expression EXP ferric oxide analog results in increased expression of SLCO2A1 mRNA CTD PMID:38615722 NCBI chr 8:103,588,916...103,672,546
Ensembl chr 8:103,588,916...103,672,546 		JBrowse link
G Slpi secretory leukocyte peptidase inhibitor multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of SLPI mRNA CTD PMID:20540983 NCBI chr 3:153,082,208...153,084,457
Ensembl chr 3:153,082,369...153,084,453 		JBrowse link
G Sod1 superoxide dismutase 1 increases expression ISO ferric oxide analog results in increased expression of SOD1 protein CTD PMID:24068039 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
G Sod2 superoxide dismutase 2 increases expression ISO ferric oxide analog results in increased expression of SOD2 protein; ferric oxide results in increased expression of SOD2 protein CTD PMID:24068039 PMID:25086211 PMID:26991130 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189 		JBrowse link
G Spata24 spermatogenesis associated 24 decreases expression ISO ferric oxide analog results in decreased expression of SPATA24 mRNA CTD PMID:24525745 NCBI chr18:27,249,047...27,257,129
Ensembl chr18:27,248,609...27,257,124 		JBrowse link
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 increases expression EXP ferric oxide analog results in increased expression of SPOCK2 mRNA CTD PMID:38615722 NCBI chr20:28,037,334...28,064,272
Ensembl chr20:28,033,475...28,064,272 		JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 increases expression EXP ferric oxide analog results in increased expression of SPTA1 mRNA CTD PMID:38615722 NCBI chr13:86,203,504...86,279,371
Ensembl chr13:86,203,504...86,279,371 		JBrowse link
G Srxn1 sulfiredoxin 1 increases expression EXP ferric oxide analog results in increased expression of SRXN1 mRNA CTD PMID:38615722 NCBI chr 3:140,604,490...140,610,050
Ensembl chr 3:140,599,608...140,628,448 		JBrowse link
G Stmn2 stathmin 2 increases expression EXP ferric oxide analog results in increased expression of STMN2 mRNA CTD PMID:38615722 NCBI chr 2:93,204,690...93,252,011
Ensembl chr 2:93,204,692...93,252,011 		JBrowse link
G Synpo2 synaptopodin 2 increases expression EXP ferric oxide analog results in increased expression of SYNPO2 mRNA CTD PMID:38615722 NCBI chr 2:211,217,099...211,371,267
Ensembl chr 2:211,216,783...211,371,267 		JBrowse link
G Tatdn2 TatD DNase domain containing 2 decreases expression ISO ferric oxide analog results in decreased expression of TATDN2 mRNA CTD PMID:24525745 NCBI chr 4:146,845,156...146,865,708
Ensembl chr 4:146,845,156...146,860,897 		JBrowse link
G Tbc1d2 TBC1 domain family, member 2 increases expression
decreases expression		 ISO ferric oxide analog results in increased expression of TBC1D2 mRNA
ferric oxide analog results in decreased expression of TBC1D2 mRNA		 CTD PMID:24525745 PMID:25086211 NCBI chr 5:60,884,114...60,931,717
Ensembl chr 5:60,884,124...60,931,352 		JBrowse link
G Tbxas1 thromboxane A synthase 1 increases expression ISO ferric oxide analog results in increased expression of TBXAS1 mRNA CTD PMID:24525745 NCBI chr 4:67,664,963...67,837,096
Ensembl chr 4:67,665,007...67,837,096 		JBrowse link
G Tf transferrin increases expression EXP ferric oxide results in increased expression of TF mRNA CTD PMID:16428268 NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511 		JBrowse link
G Tfrc transferrin receptor decreases expression ISO
EXP		 ferric oxide analog results in decreased expression of TFRC mRNA CTD PMID:25086211 PMID:38615722 NCBI chr11:68,163,413...68,185,257
Ensembl chr11:68,163,413...68,185,257 		JBrowse link
G Tgfa transforming growth factor alpha increases expression EXP ferric oxide analog results in increased expression of TGFA mRNA CTD PMID:38615722 NCBI chr 4:118,618,043...118,700,897
Ensembl chr 4:118,618,269...118,700,894 		JBrowse link
G Tgfbi transforming growth factor, beta induced increases expression ISO ferric oxide analog results in increased expression of TGFBI mRNA CTD PMID:24525745 NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240 		JBrowse link
G Tgm2 transglutaminase 2 increases expression ISO ferric oxide analog results in increased expression of TGM2 mRNA CTD PMID:25086211 NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981 		JBrowse link
G Thbs2 thrombospondin 2 decreases expression EXP ferric oxide analog results in decreased expression of THBS2 mRNA CTD PMID:38615722 NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 multiple interactions ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of TIMP1 mRNA CTD PMID:20540983 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 increases expression ISO ferric oxide results in increased expression of TIMP2 protein CTD PMID:24885771 NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611 		JBrowse link
G Tlr2 toll-like receptor 2 increases expression
multiple interactions		 ISO ferric oxide analog results in increased expression of TLR2 mRNA; ferric oxide analog results in increased expression of TLR2 protein; ferric oxide results in increased expression of TLR2 mRNA; ferric oxide results in increased expression of TLR2 protein
oxidized-L-alpha-1-palmitoyl-2-arachidonoyl-sn-glycero-3-phosphorylcholine inhibits the reaction [ferric oxide results in increased expression of TLR2 protein]		 CTD PMID:24525745 PMID:34982504 PMID:36935073 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630 		JBrowse link
G Tlr4 toll-like receptor 4 multiple interactions
increases expression		 ISO oxidized-L-alpha-1-palmitoyl-2-arachidonoyl-sn-glycero-3-phosphorylcholine inhibits the reaction [ferric oxide results in increased expression of TLR4 protein]
ferric oxide analog results in increased expression of TLR4 mRNA; ferric oxide analog results in increased expression of TLR4 protein; ferric oxide results in increased expression of TLR4 mRNA; ferric oxide results in increased expression of TLR4 protein		 CTD PMID:34982504 PMID:36935073 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628 		JBrowse link
G Tlr5 toll-like receptor 5 increases expression EXP ferric oxide analog results in increased expression of TLR5 mRNA CTD PMID:38615722 NCBI chr13:94,634,778...94,658,992
Ensembl chr13:94,634,801...94,657,738 		JBrowse link
G Tmem176a transmembrane protein 176A decreases expression ISO ferric oxide analog results in decreased expression of TMEM176A mRNA CTD PMID:25086211 NCBI chr 4:77,774,940...77,778,620
Ensembl chr 4:77,774,843...77,778,620 		JBrowse link
G Tnf tumor necrosis factor multiple interactions
increases expression
increases secretion		 ISO [Magnetite Nanoparticles co-treated with ferric oxide] results in increased expression of TNF protein; ferric oxide results in increased expression of and results in increased secretion of TNF protein; oxidized-L-alpha-1-palmitoyl-2-arachidonoyl-sn-glycero-3-phosphorylcholine inhibits the reaction [ferric oxide results in increased expression of TNF protein]; RAG1 promotes the reaction [ferric oxide analog results in increased expression of TNF protein]
ferric oxide analog results in increased expression of TNF mRNA; ferric oxide analog results in increased expression of TNF protein; ferric oxide results in increased expression of TNF mRNA
ferric oxide results in increased secretion of TNF protein
ferric oxide analog results in increased secretion of TNF protein		 CTD PMID:20540983 PMID:24068039 PMID:24525745 PMID:24885771 PMID:34982504 More... NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tnni3 troponin I3, cardiac type increases expression ISO ferric oxide results in increased expression of TNNI3 protein CTD PMID:28993115 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580 		JBrowse link
G Tox3 TOX high mobility group box family member 3 decreases expression EXP ferric oxide analog results in decreased expression of TOX3 mRNA CTD PMID:38615722 NCBI chr19:16,648,338...16,757,151
Ensembl chr19:16,648,342...16,757,148 		JBrowse link
G Tp53 tumor protein p53 increases phosphorylation
multiple interactions		 EXP ferric oxide analog results in increased phosphorylation of TP53 protein
[ferric oxide analog co-treated with Acrolein] results in increased expression of TP53 protein		 CTD PMID:22995439 PMID:24847785 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 increases expression ISO ferric oxide analog results in increased expression of TRP53INP1 mRNA CTD PMID:25086211 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein decreases expression ISO ferric oxide analog results in decreased expression of TPR mRNA CTD PMID:24525745 NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496 		JBrowse link
G Traf6 TNF receptor associated factor 6 increases expression ISO ferric oxide analog results in increased expression of TRAF6 mRNA; ferric oxide analog results in increased expression of TRAF6 protein; ferric oxide results in increased expression of TRAF6 mRNA; ferric oxide results in increased expression of TRAF6 protein CTD PMID:34982504 PMID:36935073 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507 		JBrowse link
G Trib3 tribbles pseudokinase 3 decreases expression ISO ferric oxide analog results in decreased expression of TRIB3 mRNA CTD PMID:24525745 NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497 		JBrowse link
G Tslp thymic stromal lymphopoietin multiple interactions ISO ferric oxide results in increased expression of and results in increased secretion of TSLP protein CTD PMID:34982504 NCBI chr18:24,447,409...24,454,244
Ensembl chr18:24,449,844...24,453,548 		JBrowse link
G Ttpal alpha tocopherol transfer protein like decreases expression ISO ferric oxide analog results in decreased expression of TTPAL mRNA CTD PMID:25086211 NCBI chr 3:152,278,246...152,296,550
Ensembl chr 3:152,278,303...152,296,513 		JBrowse link
G Tubb2b tubulin, beta 2B class IIb increases expression ISO ferric oxide analog results in increased expression of TUBB2B mRNA CTD PMID:24525745 NCBI chr17:30,747,734...30,750,781
Ensembl chr17:30,747,734...30,750,638 		JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 increases expression EXP ferric oxide analog results in increased expression of UCHL1 mRNA CTD PMID:38615722 NCBI chr14:41,485,031...41,495,590
Ensembl chr14:41,485,031...41,495,590 		JBrowse link
G Wdfy3 WD repeat and FYVE domain containing 3 increases expression ISO ferric oxide analog results in increased expression of WDFY3 mRNA CTD PMID:24525745 NCBI chr14:7,578,245...7,810,491
Ensembl chr14:7,606,628...7,810,482 		JBrowse link
G Yipf7 Yip1 domain family, member 7 increases expression ISO ferric oxide analog results in increased expression of YIPF7 mRNA CTD PMID:25086211 NCBI chr14:38,571,045...38,599,070
Ensembl chr14:38,571,066...38,599,055 		JBrowse link
G Zbtb2 zinc finger and BTB domain containing 2 decreases expression ISO ferric oxide analog results in decreased expression of ZBTB2 mRNA CTD PMID:24525745 NCBI chr 1:40,827,457...40,846,733
Ensembl chr 1:40,827,457...40,846,594 		JBrowse link
G Zc3h13 zinc finger CCCH type containing 13 increases expression ISO ferric oxide analog results in increased expression of ZC3H13 mRNA CTD PMID:24525745 NCBI chr15:50,607,335...50,671,802
Ensembl chr15:50,607,380...50,671,802 		JBrowse link
G Zfp36 zinc finger protein 36 increases expression ISO ferric oxide analog results in increased expression of ZFP36 mRNA CTD PMID:24525745 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
ferrosoferric oxide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased expression of BAX protein CTD PMID:30098274 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bcl2 BCL2, apoptosis regulator multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in decreased expression of BCL2 protein CTD PMID:30098274 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Casp3 caspase 3 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased cleavage of CASP3 protein; [Methotrexate co-treated with [Ferrosoferric Oxide binds to polylactide-polyethylene glycol-polylactide]] results in increased expression of CASP3 mRNA; [Methotrexate co-treated with [Ferrosoferric Oxide binds to polylactide-polyethylene glycol-polylactide]] results in increased expression of CASP3 protein modified form CTD PMID:24935781 PMID:30098274 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Casp9 caspase 9 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased cleavage of CASP9 protein CTD PMID:30098274 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626 		JBrowse link
G Fadd Fas associated via death domain multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in decreased expression of FADD protein CTD PMID:30098274 NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653 		JBrowse link
G Fas Fas cell surface death receptor multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased expression of FAS protein CTD PMID:30098274 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased expression of FOS protein CTD PMID:30098274 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036 		JBrowse link
G Hmox1 heme oxygenase 1 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in decreased expression of HMOX1 protein CTD PMID:30098274 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Il1b interleukin 1 beta increases secretion EXP
ISO		 Ferrosoferric Oxide analog results in increased secretion of IL1B protein
Ferrosoferric Oxide results in increased secretion of IL1B protein		 CTD PMID:22939914 PMID:24885771 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Il6 interleukin 6 increases secretion EXP
ISO		 Ferrosoferric Oxide analog results in increased secretion of IL6 protein
Ferrosoferric Oxide results in increased secretion of IL6 protein		 CTD PMID:22939914 PMID:24885771 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased expression of JUN protein CTD PMID:30098274 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased phosphorylation of MAPK1 protein CTD PMID:30098274 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased phosphorylation of MAPK3 protein CTD PMID:30098274 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased phosphorylation of MAPK8 protein CTD PMID:30098274 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased phosphorylation of MAPK9 protein CTD PMID:30098274 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased expression of NQO1 protein CTD PMID:30098274 NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in decreased expression of PARP1 protein CTD PMID:30098274 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased expression of PTGS2 protein CTD PMID:30098274 NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188 		JBrowse link
G Rras RAS related multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased expression of RRAS protein CTD PMID:30098274 NCBI chr 1:95,500,582...95,504,362
Ensembl chr 1:95,500,566...95,504,357 		JBrowse link
G Tnf tumor necrosis factor increases secretion EXP Ferrosoferric Oxide analog results in increased secretion of TNF protein CTD PMID:22939914 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tp53 tumor protein p53 multiple interactions ISO [Ferrosoferric Oxide binds to titanium dioxide] which results in increased expression of TP53 protein CTD PMID:30098274 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
ferrous oxide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator multiple interactions ISO bromotetrandrine promotes the reaction [[ferric oxide co-treated with ferrous oxide co-treated with Daunorubicin] results in increased expression of BAX protein] CTD PMID:19421372 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Casp3 caspase 3 multiple interactions ISO bromotetrandrine promotes the reaction [[ferric oxide co-treated with ferrous oxide co-treated with Daunorubicin] results in increased expression of CASP3 protein] CTD PMID:19421372 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Icam1 intercellular adhesion molecule 1 increases expression ISO ferrous oxide results in increased expression of ICAM1 protein CTD PMID:21439359 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19898
    chemical entity 19896
      molecular entity 19896
        transition element molecular entity 17449
          iron group molecular entity 1717
            iron molecular entity 1700
              iron oxide 295
                ferric oxide + 289
                ferrosoferric oxide + 21
                ferrous oxide 3
                iron oxide mineral + 0
                iron oxide nanoparticle + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19898
    subatomic particle 19896
      composite particle 19896
        hadron 19896
          baryon 19896
            nucleon 19896
              atomic nucleus 19896
                atom 19896
                  metal atom 18042
                    transition element atom 17586
                      d-block element atom 17581
                        iron group element atom 1725
                          iron group molecular entity 1717
                            iron molecular entity 1700
                              iron oxide 295
                                ferric oxide + 289
                                ferrosoferric oxide + 21
                                ferrous oxide 3
                                iron oxide mineral + 0
                                iron oxide nanoparticle + 0
paths to the root