Hilpda (hypoxia inducible lipid droplet-associated) - Rat Genome Database

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Gene: Hilpda (hypoxia inducible lipid droplet-associated) Rattus norvegicus
Analyze
Symbol: Hilpda
Name: hypoxia inducible lipid droplet-associated
RGD ID: 2319900
Description: Predicted to enable signaling receptor binding activity. Predicted to be involved in several processes, including autocrine signaling; cellular response to hypoxia; and positive regulation of lipid storage. Predicted to be located in several cellular components, including cell surface; lipid droplet; and secretory granule. Human ortholog(s) of this gene implicated in colorectal cancer and hepatocellular carcinoma. Orthologous to human HILPDA (hypoxia inducible lipid droplet associated); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; clofibrate; dioxygen.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypoxia-inducible protein 2-like; LOC100361568
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8458,836,463 - 58,839,423 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl458,836,463 - 58,839,423 (+)EnsemblGRCr8
mRatBN7.2457,871,088 - 57,874,048 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl457,871,110 - 57,874,557 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx462,853,822 - 62,856,785 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0458,769,980 - 58,772,943 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0457,171,873 - 57,174,836 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0456,547,600 - 56,550,584 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl456,549,739 - 56,549,993 (+)Ensemblrn6Rnor6.0
Rnor_5.0456,314,756 - 56,317,745 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4456,146,654 - 56,147,441 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera452,979,105 - 52,982,089 (+)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-alpha-phellandrene  (ISO)
1,10-phenanthroline  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-butoxyethanol  (ISO)
2-hydroxypropanoic acid  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6alpha-methylprednisolone  (ISO)
acetaldehyde  (ISO)
acrylamide  (ISO)
alpha-phellandrene  (ISO)
amphotericin B  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
Benzo[k]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
celastrol  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
chrysene  (ISO)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
cobalt dichloride  (ISO)
cobalt(2+) sulfate  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (ISO)
dibenzo[a,l]pyrene  (ISO)
dichloroacetic acid  (ISO)
dioxygen  (EXP,ISO)
doxorubicin  (ISO)
ethanol  (ISO)
fenofibrate  (EXP)
ferric oxide  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
gedunin  (ISO)
hexadecanoic acid  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
inulin  (ISO)
iron dichloride  (ISO)
isotretinoin  (ISO)
lead diacetate  (ISO)
leflunomide  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
malathion  (ISO)
manganese(II) chloride  (EXP)
methotrexate  (ISO)
motexafin gadolinium  (ISO)
N-nitrosodiethylamine  (ISO)
naphthalene  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
okadaic acid  (ISO)
oleic acid  (ISO)
ozone  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
pentanal  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pioglitazone  (ISO)
pirinixic acid  (EXP,ISO)
piroxicam  (ISO)
quercetin  (ISO)
quinolin-8-ol  (ISO)
rac-lactic acid  (ISO)
resorcinol  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sodium aurothiomalate  (ISO)
sotorasib  (ISO)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
tetraphene  (ISO)
thiram  (ISO)
trametinib  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vandetanib  (ISO)
vincristine  (ISO)
zinc acetate  (ISO)
zinc dichloride  (ISO)
zinc sulfate  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Hypoxia-inducible gene 2 promotes the immune escape of hepatocellular carcinoma from nature killer cells through the interleukin-10-STAT3 signaling pathway. Cui C, etal., J Exp Clin Cancer Res. 2019 May 29;38(1):229. doi: 10.1186/s13046-019-1233-9.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. HIG2 promotes colorectal cancer progression via hypoxia-dependent and independent pathways. Kim SH, etal., Cancer Lett. 2013 Dec 1;341(2):159-65. doi: 10.1016/j.canlet.2013.07.028. Epub 2013 Aug 2.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive Molecular Analyses of a Macrophage-Related Gene Signature With Regard to Prognosis, Immune Features, and Biomarkers for Immunotherapy in Hepatocellular Carcinoma Based on WGCNA and the LASSO Algorithm. Wang T, etal., Front Immunol. 2022 May 27;13:843408. doi: 10.3389/fimmu.2022.843408. eCollection 2022.
6. Long Non-Coding RNA PVT1/miR-150/ HIG2 Axis Regulates the Proliferation, Invasion and the Balance of Iron Metabolism of Hepatocellular Carcinoma. Xu Y, etal., Cell Physiol Biochem. 2018;49(4):1403-1419. doi: 10.1159/000493445. Epub 2018 Sep 11.
Additional References at PubMed
PMID:10690527   PMID:15930302   PMID:20624928   PMID:24876382  


Genomics

Comparative Map Data
Hilpda
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8458,836,463 - 58,839,423 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl458,836,463 - 58,839,423 (+)EnsemblGRCr8
mRatBN7.2457,871,088 - 57,874,048 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl457,871,110 - 57,874,557 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx462,853,822 - 62,856,785 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0458,769,980 - 58,772,943 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0457,171,873 - 57,174,836 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0456,547,600 - 56,550,584 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl456,549,739 - 56,549,993 (+)Ensemblrn6Rnor6.0
Rnor_5.0456,314,756 - 56,317,745 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4456,146,654 - 56,147,441 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera452,979,105 - 52,982,089 (+)NCBICelera
Cytogenetic Map4q22NCBI
HILPDA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387128,455,878 - 128,458,418 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7128,455,849 - 128,458,418 (+)Ensemblhg38GRCh38
GRCh377128,095,932 - 128,098,472 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367127,883,120 - 127,885,708 (+)NCBIBuild 36Build 36hg18NCBI36
Celera7122,898,995 - 122,901,582 (+)NCBICelera
Cytogenetic Map7q32.1NCBI
HuRef7122,456,719 - 122,459,307 (+)NCBIHuRef
CHM1_17128,029,431 - 128,032,018 (+)NCBICHM1_1
T2T-CHM13v2.07129,767,662 - 129,770,201 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27127,478,995 - 127,481,583 (+)NCBI
Hilpda
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39629,272,487 - 29,275,448 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl629,272,487 - 29,275,445 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38629,272,488 - 29,275,449 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl629,272,488 - 29,275,446 (+)Ensemblmm10GRCm38
MGSCv37629,222,488 - 29,225,449 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36629,222,680 - 29,225,454 (+)NCBIMGSCv36mm8
Celera629,277,967 - 29,280,928 (+)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.36NCBI
Hilpda
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554799,453,354 - 9,455,778 (+)Ensembl
ChiLan1.0NW_0049554799,453,627 - 9,455,680 (+)NCBIChiLan1.0ChiLan1.0
HILPDA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26165,309,886 - 165,312,494 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1717,320,156 - 17,322,741 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07120,446,572 - 120,449,174 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17133,099,119 - 133,101,669 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7133,100,523 - 133,100,714 (+)EnsemblpanPan2panpan1.1
HILPDA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1147,957,811 - 7,959,878 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha147,644,718 - 7,646,660 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0147,724,627 - 7,726,553 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl147,725,274 - 7,725,474 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1147,929,544 - 7,931,470 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0147,670,714 - 7,672,656 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0147,816,856 - 7,818,801 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Hilpda
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511854,457,494 - 54,459,444 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647915,582,260 - 15,607,428 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647915,582,260 - 15,583,213 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HILPDA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1819,944,930 - 19,947,080 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11819,944,929 - 19,947,080 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21821,014,116 - 21,016,244 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HILPDA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12197,254,246 - 97,257,186 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660426,148,354 - 6,150,923 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hilpda
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247837,536,167 - 7,538,418 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247837,536,257 - 7,538,380 (-)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Hilpda
6 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41564430960644309Rat
5685012Bmd87Bone mineral density QTL 875.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)43511329080113290Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)439431983123203361Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44140057786400577Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44442502489425024Rat
5685009Bmd86Bone mineral density QTL 863.7tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)457613242102613242Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)427730518170099664Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)44049044275726188Rat
634311Sach7Saccharin preference QTL 7taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)45807987582597589Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)458817672103817672Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)426234499134199155Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41170660492690519Rat
61336Bp21Blood pressure QTL 214.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45808014680212111Rat
2313401Anxrr27Anxiety related response QTL 27aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)41890069763900697Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)43726957782269577Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)445429897149763204Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)427862204126119996Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45889999148002343Rat
61475Aia2Adjuvant induced arthritis QTL 25.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)44047145375939996Rat
8694439Bw168Body weight QTL 1689.570.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)44140060386400603Rat
61412Pia2Pristane induced arthritis QTL 23.9joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)42228845363245191Rat
8552807Vie4Viral induced encephalitis QTL 47.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)41890069763900697Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)43044896182336920Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)445429709157555683Rat
7387227Uae40Urinary albumin excretion QTL 402.90.0052urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)41891315163913151Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42786220462997402Rat
1558651Swd3Spike wave discharge measurement QTL 34.620.000024brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)44140057786400577Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42192515166925151Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)445429897149763204Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)457664252127749483Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)4163900697Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)451085655113588029Rat
631546Bp86Blood pressure QTL 863.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45807987592690793Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)440490442117737312Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)457613339151163960Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)433538597116185060Rat
4889969Bss96Bone structure and strength QTL 964.9tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)457613242102613242Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
4889972Bss97Bone structure and strength QTL 975.6tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)457613242102613242Rat

Markers in Region
AI411073  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2457,873,545 - 57,873,679 (+)MAPPERmRatBN7.2
Rnor_6.0456,550,072 - 56,550,205NCBIRnor6.0
Rnor_5.0456,317,233 - 56,317,366UniSTSRnor5.0
RGSC_v3.4456,146,924 - 56,147,057UniSTSRGSC3.4
Celera452,981,577 - 52,981,710UniSTS
RH 3.4 Map4307.5UniSTS
RH131142  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2457,873,783 - 57,873,977 (+)MAPPERmRatBN7.2
Rnor_6.0456,550,310 - 56,550,503NCBIRnor6.0
Rnor_5.0456,317,471 - 56,317,664UniSTSRnor5.0
RGSC_v3.4456,147,162 - 56,147,355UniSTSRGSC3.4
Celera452,981,815 - 52,982,008UniSTS
RH 3.4 Map4306.4UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000084597   ⟹   ENSRNOP00000070117
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl456,549,739 - 56,549,993 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000094767
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl458,836,463 - 58,839,423 (+)Ensembl
mRatBN7.2 Ensembl457,871,110 - 57,874,557 (+)Ensembl
RefSeq Acc Id: NM_001399165   ⟹   NP_001386094
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8458,836,463 - 58,839,423 (+)NCBI
mRatBN7.2457,871,088 - 57,874,048 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001386094 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000112330
Ensembl Acc Id: ENSRNOP00000070117   ⟸   ENSRNOT00000084597
RefSeq Acc Id: NP_001386094   ⟸   NM_001399165

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JX33-F1-model_v2 AlphaFold A0A0G2JX33 1-85 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2319900 AgrOrtholog
BioCyc Gene G2FUF-45403 BioCyc
Ensembl Genes ENSRNOG00000054999 Ensembl
  ENSRNOG00000070930 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000094767 ENTREZGENE
NCBI Gene 100361568 ENTREZGENE
PhenoGen Hilpda PhenoGen
RatGTEx ENSRNOG00000054999 RatGTEx
  ENSRNOG00000070930 RatGTEx
RNAcentral URS00022B5E43 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 Hilpda  hypoxia inducible lipid droplet-associated  Hilpda  hypoxia inducible lipid droplet-associated  Data merged from RGD:149736093 737654 PROVISIONAL
2021-08-09 Hilpda  hypoxia inducible lipid droplet-associated      Symbol and Name status set to provisional 45752 PROVISIONAL
2012-08-22 Hilpda  hypoxia inducible lipid droplet-associated  LOC100361568  hypoxia-inducible protein 2-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 LOC100361568  hypoxia-inducible protein 2-like      Symbol and Name status set to provisional 70820 PROVISIONAL