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Gene: Wdfy3 (WD repeat and FYVE domain containing 3) Rattus norvegicus
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Symbol: Wdfy3
Name: WD repeat and FYVE domain containing 3
Description: Predicted to have 1-phosphatidylinositol binding activity and beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity. Predicted to be involved in aggrephagy. Predicted to colocalize with the Atg12-Atg5-Atg16 complex and autophagosome. Human ortholog(s) of this gene implicated in primary autosomal dominant microcephaly 18. Orthologous to human WDFY3 (WD repeat and FYVE domain containing 3); INTERACTS WITH 17alpha-ethynylestradiol; 2,6-dinitrotoluene; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305164; WD repeat and FYVE domain-containing protein 3
Orthologs:
Homo sapiens (human) : WDFY3 (WD repeat and FYVE domain containing 3)  HGNC  Alliance
Mus musculus (house mouse) : Wdfy3 (WD repeat and FYVE domain containing 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Wdfy3 (WD repeat and FYVE domain containing 3)
Pan paniscus (bonobo/pygmy chimpanzee) : WDFY3 (WD repeat and FYVE domain containing 3)
Canis lupus familiaris (dog) : WDFY3 (WD repeat and FYVE domain containing 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Wdfy3 (WD repeat and FYVE domain containing 3)
Sus scrofa (pig) : WDFY3 (WD repeat and FYVE domain containing 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0149,169,409 - 9,384,835 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl149,141,512 - 9,381,870 (+)Ensembl
Rnor_5.0149,103,906 - 9,346,391 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4148,916,412 - 9,060,345 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1148,859,864 - 9,059,829 (+)NCBI
Celera147,728,559 - 7,930,146 (+)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Wdfy3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307097
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.