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Gene: Hist2h2be (histone cluster 2 H2B family member E) Rattus norvegicus
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Symbol: Hist2h2be
Name: histone cluster 2 H2B family member E
Description: Predicted to have DNA binding activity and lipopolysaccharide binding activity. Predicted to be involved in several processes, including defense response to other organism; negative regulation of tumor necrosis factor-mediated signaling pathway; and nucleosome assembly. Predicted to colocalize with the plasma membrane. Orthologous to several human genes including H2BC11 (H2B clustered histone 11); PARTICIPATES IN systemic lupus erythematosus pathway; INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 3',5'-cyclic AMP; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: MODEL
Also known as: histone cluster 2, H2be; histone H2B type 2-E; LOC295274; RGD1562346; similar to histone H2b-613
Orthologs:
Homo sapiens (human) : H2BC11 (H2B clustered histone 11)  HGNC  Alliance
Mus musculus (house mouse) : H2bc21 (H2B clustered histone 21)  MGI  Alliance
Canis lupus familiaris (dog) : H2BC11 (H2B clustered histone 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02198,360,837 - 198,363,399 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2198,360,998 - 198,361,378 (+)Ensembl
Rnor_5.02217,846,629 - 217,849,158 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42191,024,190 - 191,026,614 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2176,308,071 - 176,310,633 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hist2h2be
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562346
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.