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Gene: Lamp1 (lysosomal-associated membrane protein 1) Rattus norvegicus
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Symbol: Lamp1
Name: lysosomal-associated membrane protein 1
Description: Predicted to have enzyme binding activity and protein domain specific binding activity. Involved in autophagic cell death. Localizes to several cellular components, including the cytoplasmic vesicle; dendrite; and neuronal cell body. Predicted to colocalize with the lysosome. Orthologous to human LAMP1 (lysosomal associated membrane protein 1); PARTICIPATES IN autophagy pathway; phagocytosis pathway; tuberculosis pathway; INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 120 kDa lysosomal membrane glycoprotein; CD107 antigen-like family member A; LAMP-1; LGP-120; LGP120; Lysosomal associated membrane protein 1 (120 kDa); lysosomal membrane glycoprotein 1; lysosome-associated membrane glycoprotein 1; lysosome-associated membrane protein 1
Orthologs:
Homo sapiens (human) : LAMP1 (lysosomal associated membrane protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Lamp1 (lysosomal-associated membrane protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lamp1 (lysosomal associated membrane protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LAMP1 (lysosomal associated membrane protein 1)
Canis lupus familiaris (dog) : LAMP1 (lysosomal associated membrane protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lamp1 (lysosomal associated membrane protein 1)
Sus scrofa (pig) : LAMP1 (lysosomal associated membrane protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01681,689,576 - 81,714,341 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1681,689,335 - 81,714,419 (-)Ensembl
Rnor_5.01681,175,574 - 81,200,580 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41681,213,165 - 81,230,019 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11681,213,425 - 81,230,284 (-)NCBI
Celera1674,162,536 - 74,179,021 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
RH 3.4 Map16744.4RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Lamp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2989
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.