Rgs16 (regulator of G-protein signaling 16) - Rat Genome Database

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Gene: Rgs16 (regulator of G-protein signaling 16) Rattus norvegicus
Analyze
Symbol: Rgs16
Name: regulator of G-protein signaling 16
RGD ID: 1589741
Description: Predicted to enable GTPase activator activity. Predicted to be involved in G protein-coupled receptor signaling pathway and positive regulation of GTPase activity. Located in membrane raft. Orthologous to human RGS16 (regulator of G protein signaling 16); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: regulator of G-protein signaling 16 (mapped); retinal-specific RGS; retinally abundant regulator of G-protein signaling; RGS-R; Rgs16_mapped
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21365,887,788 - 65,891,232 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1365,887,530 - 65,892,857 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1368,488,860 - 68,492,298 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01369,779,050 - 69,782,494 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01367,032,029 - 67,035,429 (+)NCBIRnor_WKY
Rnor_6.01371,163,411 - 71,185,147 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1371,179,910 - 71,185,216 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01376,128,653 - 76,150,399 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41368,807,863 - 68,811,307 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1365,788,298 - 65,791,737 (+)NCBICelera
Cytogenetic Map13q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(S)-colchicine  (ISO)
1,2-dimethylhydrazine  (ISO)
1-fluoro-2,4-dinitrobenzene  (ISO)
15-acetyldeoxynivalenol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-fluorouracil  (ISO)
8-Br-cAMP  (ISO)
acetamide  (EXP)
acrylamide  (ISO)
adenine  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
arsenite(3-)  (ISO)
azoxystrobin  (EXP)
benzo[a]pyrene  (ISO)
benzoates  (ISO)
beta-naphthoflavone  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
choline  (ISO)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
clofibric acid  (EXP)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) sulfate  (ISO)
curcumin  (ISO)
cyanocob(III)alamin  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (ISO)
dichloroacetic acid  (ISO)
diclofenac  (ISO)
dinophysistoxin 1  (ISO)
dioxygen  (EXP,ISO)
disulfiram  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
ethyl methanesulfonate  (ISO)
fenofibrate  (EXP)
fenthion  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
fumonisin B1  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (EXP)
glycine betaine  (ISO)
glyphosate  (EXP)
hydrogen peroxide  (ISO)
hydroxyurea  (ISO)
imidacloprid  (EXP)
indole-3-methanol  (EXP)
kainic acid  (ISO)
L-methionine  (ISO)
Lasiocarpine  (ISO)
leflunomide  (ISO)
Licochalcone B  (ISO)
lipopolysaccharide  (EXP,ISO)
manganese(II) chloride  (EXP)
melphalan  (ISO)
menadione  (ISO)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (EXP,ISO)
mitomycin C  (ISO)
N(6)-dimethylallyladenine  (ISO)
N-acetyl-L-cysteine  (EXP)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-Nitrosopyrrolidine  (ISO)
naphthalene  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
orphenadrine  (EXP)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
pentachlorophenol  (ISO)
pentanal  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
phosgene  (ISO)
pirinixic acid  (EXP,ISO)
pravastatin  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propanal  (ISO)
propiconazole  (ISO)
protein kinase inhibitor  (ISO)
raloxifene  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
succimer  (ISO)
sulfasalazine  (ISO)
sulindac sulfide  (ISO)
sunitinib  (ISO)
tacrolimus hydrate  (ISO)
tamibarotene  (ISO)
tamoxifen  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP,ISO)
theophylline  (ISO)
thiabendazole  (EXP)
thioacetamide  (EXP)
titanium dioxide  (ISO)
trichloroethene  (EXP,ISO)
triphenyl phosphate  (EXP)
Triptolide  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)
zaragozic acid A  (EXP,ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Palmitoylation regulates regulators of G-protein signaling (RGS) 16 function. I. Mutation of amino-terminal cysteine residues on RGS16 prevents its targeting to lipid rafts and palmitoylation of an internal cysteine residue. Hiol A, etal., J Biol Chem 2003 May 23;278(21):19301-8. Epub 2003 Mar 17.
2. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1300469   PMID:8917514   PMID:10373502   PMID:10791963   PMID:15793568   PMID:15946253   PMID:18434541   PMID:19374869   PMID:19588733  


Genomics

Comparative Map Data
Rgs16
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21365,887,788 - 65,891,232 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1365,887,530 - 65,892,857 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1368,488,860 - 68,492,298 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01369,779,050 - 69,782,494 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01367,032,029 - 67,035,429 (+)NCBIRnor_WKY
Rnor_6.01371,163,411 - 71,185,147 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1371,179,910 - 71,185,216 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01376,128,653 - 76,150,399 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41368,807,863 - 68,811,307 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1365,788,298 - 65,791,737 (+)NCBICelera
Cytogenetic Map13q21NCBI
RGS16
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381182,598,623 - 182,604,389 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1182,598,623 - 182,604,389 (-)EnsemblGRCh38hg38GRCh38
GRCh371182,567,758 - 182,573,524 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361180,834,381 - 180,840,171 (-)NCBINCBI36Build 36hg18NCBI36
Build 341179,299,415 - 179,305,200NCBI
Celera1155,678,992 - 155,684,782 (-)NCBICelera
Cytogenetic Map1q25.3NCBI
HuRef1153,804,224 - 153,810,014 (-)NCBIHuRef
CHM1_11183,991,292 - 183,997,081 (-)NCBICHM1_1
T2T-CHM13v2.01181,958,121 - 181,963,886 (-)NCBIT2T-CHM13v2.0
Rgs16
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391153,616,099 - 153,621,214 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1153,616,095 - 153,621,214 (+)EnsemblGRCm39 Ensembl
GRCm381153,740,353 - 153,745,468 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1153,740,349 - 153,745,468 (+)EnsemblGRCm38mm10GRCm38
MGSCv371155,587,483 - 155,592,598 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361155,502,566 - 155,507,684 (+)NCBIMGSCv36mm8
Celera1156,172,183 - 156,177,294 (+)NCBICelera
Cytogenetic Map1G3NCBI
cM Map165.43NCBI
Rgs16
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540621,439,272 - 21,445,038 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540621,439,536 - 21,444,822 (-)NCBIChiLan1.0ChiLan1.0
RGS16
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11161,768,921 - 161,774,709 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1161,765,595 - 161,774,709 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01158,117,257 - 158,123,031 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
RGS16
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1716,009,283 - 16,015,228 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl716,009,271 - 16,015,597 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha715,595,717 - 15,601,663 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0715,738,716 - 15,744,653 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl715,739,616 - 15,744,690 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1715,650,339 - 15,656,274 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0715,758,624 - 15,764,560 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0715,887,673 - 15,893,854 (-)NCBIUU_Cfam_GSD_1.0
Rgs16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934489,300,380 - 89,305,804 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364817,147,013 - 7,152,565 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049364817,147,147 - 7,152,555 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RGS16
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9123,913,173 - 123,918,871 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19123,913,179 - 123,919,119 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29136,173,524 - 136,175,853 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RGS16
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12546,764,097 - 46,769,895 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2546,764,134 - 46,769,896 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605547,982,051 - 47,987,847 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rgs16
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462481411,249,335 - 11,255,113 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462481411,249,448 - 11,254,728 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rgs16
26 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:64
Count of miRNA genes:56
Interacting mature miRNAs:60
Transcripts:ENSRNOT00000032236
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132230187567301875Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132320344868203448Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132369296968692969Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132369296968692969Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
12879444Bp397Blood pressure QTL 397arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134504940490049404Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134551471990514719Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
2303028Bp329Blood pressure QTL 329arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135849787273485113Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)135949252277046890Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 5 5 5 54 4
Low 2 43 42 26 19 26 8 11 20 35 32 11 8
Below cutoff 10 10 10 5

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000032236   ⟹   ENSRNOP00000029844
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1365,887,530 - 65,892,857 (+)Ensembl
Rnor_6.0 Ensembl1371,179,910 - 71,185,216 (+)Ensembl
RefSeq Acc Id: NM_001077589   ⟹   NP_001071057
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21365,887,788 - 65,891,232 (+)NCBI
Rnor_6.01371,180,078 - 71,183,522 (+)NCBI
Rnor_5.01376,128,653 - 76,150,399 (+)NCBI
RGSC_v3.41368,807,863 - 68,811,307 (+)RGD
Celera1365,788,298 - 65,791,737 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001071057 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAV85502 (Get FASTA)   NCBI Sequence Viewer  
  EDM09539 (Get FASTA)   NCBI Sequence Viewer  
  P56700 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001071057   ⟸   NM_001077589
- UniProtKB: Q4L0E9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000029844   ⟸   ENSRNOT00000032236
Protein Domains
RGS

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P56700-F1-model_v2 AlphaFold P56700 1-199 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698899
Promoter ID:EPDNEW_R9424
Type:single initiation site
Name:Rgs16_1
Description:regulator of G-protein signaling 16
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01371,179,958 - 71,180,018EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1589741 AgrOrtholog
BioCyc Gene G2FUF-17877 BioCyc
Ensembl Genes ENSRNOG00000027024 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000029844 ENTREZGENE
  ENSRNOP00000029844.4 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000032236 ENTREZGENE
  ENSRNOT00000032236.6 UniProtKB/TrEMBL
Gene3D-CATH 1.10.167.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.10.196.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro RGS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RGS_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RGS_subdom1/3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RGS_subdomain_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:360857 UniProtKB/TrEMBL
NCBI Gene 360857 ENTREZGENE
Pfam RGS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rgs16 PhenoGen
PRINTS RGSPROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE RGS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RGS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48097 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt P56700 ENTREZGENE
  Q4L0E9 ENTREZGENE, UniProtKB/TrEMBL
  RGS16_RAT UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2007-04-12 Rgs16  regulator of G-protein signaling 16  Rgs16_mapped  regulator of G-protein signaling 16 (mapped)  Data Merged 737654 APPROVED
2006-11-19 Rgs16_mapped  regulator of G-protein signaling 16(mapped)  Rgs16  regulator of G-protein signaling 16  Symbol set to symbol_mapped, name set to name (mapped) 1582166 APPROVED
2006-11-19 Rgs16  regulator of G-protein signaling 16      Symbol and Name status set to provisional 70820 PROVISIONAL
2002-06-10 Rgs16  Regulator of G-protein signaling 16      Symbol and Name status set to approved 70586 APPROVED