Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Cxcl10 (C-X-C motif chemokine ligand 10) Rattus norvegicus
Analyze
Symbol: Cxcl10
Name: C-X-C motif chemokine ligand 10
Description: Exhibits chemokine activity. Involved in several processes, including response to auditory stimulus; response to gamma radiation; and response to vitamin D. Localizes to the extracellular space. Used to study adult respiratory distress syndrome; myocarditis; proteinuria; renovascular hypertension; and type 1 diabetes mellitus. Biomarker of brain ischemia; encephalitis; and uveitis. Human ortholog(s) of this gene implicated in middle cerebral artery infarction. Orthologous to human CXCL10 (C-X-C motif chemokine ligand 10); PARTICIPATES IN chemokine mediated signaling pathway; cytokine mediated signaling pathway; influenza A pathway; INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 10 kDa interferon gamma-induced protein; C-X-C motif chemokine 10; chemokine (C-X-C motif) ligand 10; gamma-IP10; interferon-inducible cytokine IP-10; interferon-inducible protein 10; IP-10; protein Mob-1; Scyb10; small inducible cytokine B subfamily (Cys-X-Cys) member 10; small inducible cytokine B subfamily (Cys-X-Cys), member 10; small-inducible cytokine B10
Orthologs:
Homo sapiens (human) : CXCL10 (C-X-C motif chemokine ligand 10)  HGNC  Alliance
Mus musculus (house mouse) : Cxcl10 (chemokine (C-X-C motif) ligand 10)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cxcl10 (C-X-C motif chemokine ligand 10)
Pan paniscus (bonobo/pygmy chimpanzee) : CXCL10 (C-X-C motif chemokine ligand 10)
Canis lupus familiaris (dog) : CXCL10 (C-X-C motif chemokine ligand 10)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cxcl10 (C-X-C motif chemokine ligand 10)
Sus scrofa (pig) : CXCL10 (C-X-C motif chemokine ligand 10)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01417,210,733 - 17,212,930 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01417,126,865 - 17,129,062 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41417,265,986 - 17,268,183 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11417,265,985 - 17,268,183 (+)NCBI
Celera1415,099,217 - 15,101,414 (+)NCBICelera
Cytogenetic Map14p22NCBI
RH 3.4 Map14182.09RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cxcl10
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620209
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-07-02
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.