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Gene: Fblim1 (filamin binding LIM protein 1) Rattus norvegicus
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Symbol: Fblim1
Name: filamin binding LIM protein 1
Description: Predicted to have filamin binding activity; pre-mRNA intronic binding activity; and transcription regulatory region DNA binding activity. Predicted to be involved in cell-cell adhesion; regulation of alternative mRNA splicing, via spliceosome; and regulation of integrin activation. Predicted to localize to several cellular components, including the focal adhesion; nuclear lumen; and stress fiber. Orthologous to human FBLIM1 (filamin binding LIM protein 1); PARTICIPATES IN integrin mediated signaling pathway; INTERACTS WITH 1-naphthyl isothiocyanate; aflatoxin B1; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Cal; CSX-associated LIM; filamin-binding LIM protein 1; heterogeneous nuclear ribonucleoprotein L; hnRNP L; Hnrnpl; MGC105665
Orthologs:
Homo sapiens (human) : FBLIM1 (filamin binding LIM protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Fblim1 (filamin binding LIM protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fblim1 (filamin binding LIM protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : FBLIM1 (filamin binding LIM protein 1)
Canis lupus familiaris (dog) : FBLIM1 (filamin binding LIM protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fblim1 (filamin binding LIM protein 1)
Sus scrofa (pig) : FBLIM1 (filamin binding LIM protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05160,122,466 - 160,158,921 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5160,122,425 - 160,158,386 (-)Ensembl
Rnor_5.05163,841,377 - 163,867,441 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45160,468,558 - 160,495,015 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15160,478,745 - 160,505,203 (-)NCBI
Celera5152,241,216 - 152,267,207 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Fblim1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359551
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.