Gene: Lst1 (leukocyte specific transcript 1) Rattus norvegicus
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Symbol: Lst1
Name: leukocyte specific transcript 1
Description: INVOLVED IN dendrite development (ortholog); negative regulation of lymphocyte proliferation (ortholog); ASSOCIATED WITH Graft vs Host Disease (ortholog); Hereditary Hyperbilirubinemia (ortholog); Inflammation (ortholog); FOUND IN cytoplasm (ortholog); integral component of membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; benzo[a]pyrene
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: B144; leucocyte specific transcript 1
Orthologs:
Homo sapiens (human) : LST1 (leukocyte specific transcript 1)  HGNC  Alliance
Mus musculus (house mouse) : Lst1 (leukocyte specific transcript 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lst1 (leukocyte specific transcript 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LST1 (leukocyte specific transcript 1)
Canis lupus familiaris (dog) : LST1 (leukocyte specific transcript 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lst1 (leukocyte specific transcript 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,175,213 - 5,179,352 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,248,563 - 7,252,609 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,698,568 - 3,701,564 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,698,794 - 3,701,713 (+)NCBI
Celera204,387,819 - 4,391,014 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Lst1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620077
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2018-12-11
Status: ACTIVE