ONTOLOGY REPORT - ANNOTATIONS
Term: macroautophagy
Accession: GO:0016236
browse the term
Definition: The major inducible pathway for the general turnover of cytoplasmic constituents in eukaryotic cells, it is also responsible for the degradation of active cytoplasmic enzymes and organelles during nutrient starvation. Macroautophagy involves the formation of double-membrane-bounded autophagosomes which enclose the cytoplasmic constituent targeted for degradation in a membrane-bounded structure. Autophagosomes then fuse with a lysosome (or vacuole) releasing single-membrane-bounded autophagic bodies that are then degraded within the lysosome (or vacuole). Some types of macroautophagy, e.g. pexophagy, mitophagy, involve selective targeting of the targets to be degraded.
Comment: Targeted macroautophagy sometimes targets regions of cytoplasm containing non-self, such as virus particles or components (e.g. see PMID:20159618). As this is essentially the same process as macroautophagy that encloses and digests only self, the term autophagy is still used despite the enclosure of some non-self (non-auto) entities.
Synonyms: broad_synonym: autophagy
alt_id: GO:0034262
G
Acbd5
acyl-CoA binding domain containing 5
NOT|involved_in
ISO
(PMID:24535825)
RGD
PMID:24535825
NCBI chr17:85,206,178...85,248,909
Ensembl chr17:85,206,303...85,248,215
G
Atg10
autophagy related 10
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:22,109,304...22,398,313
Ensembl chr 2:22,108,426...22,398,233
G
Atg12
autophagy related 12
involved_in
ISO
(PMID:25484072) (MGI:2137756|PMID:11266458)
RGD
PMID:11266458 PMID:25484072
MGI:2137756
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
G
Atg14
autophagy related 14
involved_in
ISO
(PMID:23878393)
RGD
PMID:23878393
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
G
Atg16l1
autophagy related 16-like 1
involved_in
ISO
(PMID:29317426), (PMID:33586810) (MGI:2137756|PMID:11266458)
RGD
PMID:11266458 PMID:29317426 PMID:33586810
MGI:2137756
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Atg16l2
autophagy related 16-like 2
involved_in
ISO
(MGI:2137756|PMID:11266458)
RGD
PMID:11266458
MGI:2137756
NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
G
Atg3
autophagy related 3
acts_upstream_of_or_within
ISO
(MGI:5562485|PMID:24035364)
RGD
PMID:24035364
MGI:5562485
NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
G
Atg5
autophagy related 5
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3612279 (MGI:4457987|PMID:20453062), (MGI:5494529|PMID:22496425), (MGI:5500861|PMID:23704209), (MGI:5562485|PMID:24035364) GO_REF:0000117 (MGI:2137756|PMID:11266458) (PMID:25484072)
RGD UniProt
PMID:11266458 PMID:20453062 PMID:22496425 PMID:23704209 PMID:24035364 PMID:25484072 More...
GO_REF:0000117 MGI:2137756 MGI:4457987 MGI:5494529 MGI:5500861 MGI:5562485
NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
G
Atg7
autophagy related 7
involved_in acts_upstream_of_or_within
ISO
(PMID:22354037) MGI:1934631|MGI:3587769 (MGI:5494529|PMID:22496425), (MGI:5500861|PMID:23704209), (MGI:5562485|PMID:24035364)
RGD
PMID:22354037 PMID:22496425 PMID:23704209 PMID:24035364
MGI:5494529 MGI:5500861 MGI:5562485
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
Becn1
beclin 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (MGI:5619439|PMID:23332761) MGI:1097712|MGI:2683833 (MGI:2682527|PMID:14657337), (MGI:3723543|PMID:17468177)
UniProt RGD
PMID:14657337 PMID:17468177 PMID:23332761
GO_REF:0000024 MGI:2682527 MGI:3723543 MGI:5619439
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
acts_upstream_of_or_within
ISO
MGI:2388888 (MGI:3690270|PMID:16714284)
RGD
PMID:16714284
MGI:3690270
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
G
Ei24
EI24, autophagy associated transmembrane protein
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571
G
Gabarap
GABA type A receptor-associated protein
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
G
Gabarapl1
GABA type A receptor associated protein like 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
G
Gabarapl2
GABA type A receptor associated protein like 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
G
Hdac10
histone deacetylase 10
involved_in
ISO ISS
(PMID:23801752) GO_REF:0000024
RGD UniProt
PMID:23801752
GO_REF:0000024
NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228
G
Hmox1
heme oxygenase 1
acts_upstream_of involved_in
ISO IEA
MGI:2429784 (MGI:5430482|PMID:20705711) GO_REF:0000107
RGD Ensembl
PMID:20705711
GO_REF:0000107 MGI:5430482
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
G
LOC100359937
GABA(A) receptor-associated protein-like 2-like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:89,246,175...89,247,132
Ensembl chr 8:89,246,195...89,247,139
G
LOC120098596
gamma-aminobutyric acid receptor-associated protein-like 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:55,052,756...55,053,109
Ensembl chr19:55,052,756...55,053,109
G
Map1lc3a
microtubule-associated protein 1 light chain 3 alpha
involved_in
ISO IBA
(PMID:28223137) PMID:21873635
RGD
PMID:28223137 PMID:21873635
RGD:13792537
NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
G
Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
ISO IBA
(PMID:28223137) PMID:21873635
RGD
PMID:28223137 PMID:21873635
RGD:13792537
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
G
Map1lc3b2
microtubule-associated protein 1 light chain 3 beta 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
G
Mtor
mechanistic target of rapamycin kinase
acts_upstream_of
ISO
(MGI:3690270|PMID:16714284)
RGD
PMID:16714284
MGI:3690270
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Myo5a
myosin VA
IMP
RGD
PMID:29217155
RGD:42721980
NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
G
Nbr1
NBR1, autophagy cargo receptor
involved_in
IBA IEA ISS ISO
PMID:21873635 GO_REF:0000107 GO_REF:0000002 GO_REF:0000024 (PMID:19250911)
Ensembl InterPro UniProt RGD
PMID:19250911 PMID:21873635
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107, RGD:13792537
NCBI chr10:86,477,775...86,506,418
Ensembl chr10:86,478,290...86,506,412
G
Npc1
NPC intracellular cholesterol transporter 1
acts_upstream_of involved_in
ISO IEA
MGI:1857409|MGI:1891828 (MGI:3723543|PMID:17468177) GO_REF:0000107
RGD Ensembl
PMID:17468177
GO_REF:0000107 MGI:3723543
NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
G
Pik3c2a
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
acts_upstream_of_or_within
ISO
MGI:2685054 (MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
G
Pik3c2b
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
acts_upstream_of_or_within
ISO
MGI:1203729 (MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612
G
Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5619439|PMID:23332761), (MGI:5630037|PMID:25578879)
UniProt RGD
PMID:23332761 PMID:25578879
GO_REF:0000024 MGI:5619439 MGI:5630037
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
G
Pik3r4
phosphoinositide-3-kinase, regulatory subunit 4
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
G
Pim2
Pim-2 proto-oncogene, serine/threonine kinase
acts_upstream_of
ISO
(MGI:4361989|PMID:17476689)
RGD
PMID:17476689
MGI:4361989
NCBI chr X:14,617,582...14,622,851
Ensembl chr X:14,617,582...14,622,851
G
Plaa
phospholipase A2, activating protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:27753622)
UniProt RGD
PMID:27753622
GO_REF:0000024
NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
G
Sqstm1
sequestosome 1
involved_in
ISO ISS
(PMID:20168092) GO_REF:0000024
RGD UniProt
PMID:20168092
GO_REF:0000024
NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
G
Tbc1d5
TBC1 domain family, member 5
involved_in
ISO
(PMID:24603492)
RGD
PMID:24603492
NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913
G
Tcirg1
T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3
acts_upstream_of_or_within
ISO
MGI:1856973 (MGI:5500861|PMID:23704209)
RGD
PMID:23704209
MGI:5500861
NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
G
Tecpr1
tectonin beta-propeller repeat containing 1
involved_in
ISO
(PMID:25484072)
RGD
PMID:25484072
NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
G
Tmem74
transmembrane protein 74
involved_in
ISO
(PMID:18294959)
RGD
PMID:18294959
NCBI chr 7:74,929,286...74,937,973
Ensembl chr 7:74,931,694...74,937,934
G
Tp53inp2
tumor protein p53 inducible nuclear protein 2
acts_upstream_of_or_within
ISO
MGI:1931135|MGI:5637673 (MGI:5582129|PMID:24713655)
RGD
PMID:24713655
MGI:5582129
NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
G
Ubqln1
ubiquilin 1
involved_in
ISO
(PMID:20529957)
RGD
PMID:20529957
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
G
Ubxn6
UBX domain protein 6
involved_in
ISO
(PMID:27753622)
RGD
PMID:27753622
NCBI chr 9:900,883...906,047
Ensembl chr 9:900,884...906,124
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in acts_upstream_of_or_within
ISO
(PMID:22354037) UniProtKB:O70405 (MGI:5607224|PMID:21855797) (MGI:5285135|PMID:21258367)
RGD
PMID:21258367 PMID:21855797 PMID:22354037
MGI:5285135 MGI:5607224
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Vcp
valosin-containing protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:27753622)
UniProt RGD
PMID:27753622
GO_REF:0000024
NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
G
Vps41
VPS41 subunit of HOPS complex
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:46,063,124...46,227,582
Ensembl chr17:46,063,124...46,227,791
G
Vti1a
vesicle transport through interaction with t-SNAREs 1A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
G
Vti1b
vesicle transport through interaction with t-SNAREs 1B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
G
Yod1
YOD1 deubiquitinase
involved_in
ISS ISO
GO_REF:0000024 (PMID:27753622)
UniProt RGD
PMID:27753622
GO_REF:0000024
NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205
G
Zfyve1
zinc finger FYVE-type containing 1
involved_in
ISO
(PMID:25578879)
RGD
PMID:25578879
NCBI chr 6:103,184,938...103,234,111
Ensembl chr 6:103,184,938...103,234,039
G
Acbd5
acyl-CoA binding domain containing 5
NOT|involved_in
ISO
(PMID:24535825)
RGD
PMID:24535825
NCBI chr17:85,206,178...85,248,909
Ensembl chr17:85,206,303...85,248,215
G
Atg5
autophagy related 5
involved_in
IEA ISO
GO_REF:0000107 (MGI:5751672|PMID:22982048) (PMID:22982048)
Ensembl RGD
PMID:22982048
GO_REF:0000107 MGI:5751672
NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
G
Sqstm1
sequestosome 1
involved_in
ISO IBA ISS
UniProtKB:Q562E7 (PMID:28404643) PMID:21873635 GO_REF:0000024
RGD UniProt
PMID:28404643 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
G
Ubqln1
ubiquilin 1
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:21143716)
Ensembl UniProt RGD
PMID:21143716
GO_REF:0000024 GO_REF:0000107
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
G
Wdfy3
WD repeat and FYVE domain containing 3
involved_in
ISO IBA
(PMID:20168092), (PMID:20417604) PMID:21873635
RGD
PMID:20168092 PMID:20417604 PMID:21873635
RGD:13792537
NCBI chr14:7,578,245...7,810,491
Ensembl chr14:7,606,628...7,810,482
G
Wdr81
WD repeat domain 81
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:28404643)
UniProt RGD
PMID:28404643 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr10:60,281,969...60,295,374
Ensembl chr10:60,281,972...60,295,296
G
Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO
(PMID:20921139), (PMID:25215947)
RGD
PMID:20921139 PMID:25215947
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
G
Ap4m1
adaptor related protein complex 4 subunit mu 1
involved_in
ISO ISS
(PMID:29180427) GO_REF:0000024
RGD UniProt
PMID:29180427
GO_REF:0000024
NCBI chr12:17,049,766...17,055,954
Ensembl chr12:17,049,777...17,058,026
G
Arsg
arylsulfatase G
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr10:94,412,261...94,551,224
Ensembl chr10:94,447,399...94,542,941
G
Atg101
autophagy related 101
involved_in
ISO IBA
(PMID:19225151), (PMID:19597335) PMID:21873635 (MGI:6810791|PMID:19225151)
RGD
PMID:19225151 PMID:19597335 PMID:21873635
MGI:6810791 , RGD:13792537
NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633
G
Atg12
autophagy related 12
involved_in
IBA ISO
PMID:21873635 (MGI:2137756|PMID:11266458)
RGD
PMID:11266458 PMID:21873635
MGI:2137756 , RGD:13792537
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
G
Atg13
autophagy related 13
acts_upstream_of_or_within involved_in
ISO
(PMID:19211835) (MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151) (PMID:19211835), (PMID:19225151)
RGD
PMID:19211835 PMID:19225151 PMID:19258318
MGI:3849242 MGI:6810791
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
G
Atg14
autophagy related 14
involved_in
IBA ISO
PMID:21873635 (PMID:19270696)
RGD
PMID:19270696 PMID:21873635
RGD:13792537
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
G
Atg16l1
autophagy related 16-like 1
involved_in
IBA ISO
PMID:21873635 (MGI:2137756|PMID:11266458)
RGD
PMID:11266458 PMID:21873635
MGI:2137756 , RGD:13792537
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Atg16l2
autophagy related 16-like 2
involved_in NOT|involved_in
IBA ISO
PMID:21873635 (MGI:2137756|PMID:11266458) (MGI:6436405|PMID:22082872)
RGD
PMID:11266458 PMID:22082872 PMID:21873635
MGI:2137756 MGI:6436405 , RGD:13792537
NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
G
Atg2a
autophagy related 2A
involved_in
ISO IBA
(PMID:28561066) PMID:21873635
RGD
PMID:28561066 PMID:21873635
RGD:13792537
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
G
Atg2b
autophagy related 2B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
G
Atg3
autophagy related 3
involved_in acts_upstream_of_or_within
IBA ISO ISS
PMID:21873635 (MGI:4835103|PMID:20723759) (MGI:4880808|PMID:21220506) GO_REF:0000024
RGD UniProt
PMID:20723759 PMID:21220506 PMID:21873635
GO_REF:0000024 MGI:4835103 MGI:4880808 , RGD:13792537
NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
G
Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO
(MGI:5630037|PMID:25578879)
RGD
PMID:25578879
MGI:5630037
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
G
Atg5
autophagy related 5
involved_in acts_upstream_of_or_within
IMP ISO IBA
(MGI:2137756|PMID:11266458) (MGI:5500861|PMID:23704209) PMID:21873635
RGD
PMID:11266458 PMID:23704209 PMID:16420522 PMID:21873635
MGI:2137756 MGI:5500861 , RGD:1643189 , RGD:13792537
NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
G
Atg7
autophagy related 7
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (MGI:5500861|PMID:23704209) (MGI:4420830|PMID:20080761)
RGD
PMID:20080761 PMID:23704209 PMID:21873635
MGI:4420830 MGI:5500861 , RGD:13792537
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
Atg9a
autophagy related 9A
acts_upstream_of_or_within involved_in
ISO ISS
MGI:4417824 (MGI:5494547|PMID:22456507), (MGI:5509287|PMID:23402761) GO_REF:0000024 (PMID:29180427), (PMID:29437695), (PMID:32513819), (PMID:33468622) (PMID:15755735), (PMID:22456507)
RGD UniProt
PMID:15755735 PMID:22456507 PMID:23402761 PMID:29180427 PMID:29437695 PMID:32513819 PMID:33468622 More...
GO_REF:0000024 MGI:5494547 MGI:5509287
NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
G
Atg9b
autophagy related 9B
acts_upstream_of_or_within
ISO
(PMID:15755735)
RGD
PMID:15755735
NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
G
Atp2a2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28890335)
UniProt RGD
PMID:28890335
GO_REF:0000024
NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
G
Bag3
BAG cochaperone 3
involved_in
IMP
PMID:23434281
ARUK-UCL
PMID:23434281
RGD:12793031
NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
G
Becn1
beclin 1
involved_in
IMP ISO ISS IBA
(MGI:5619439|PMID:23332761) GO_REF:0000024 PMID:21873635
RGD UniProt
PMID:23332761 PMID:16420522 PMID:21873635
GO_REF:0000024 MGI:5619439 , RGD:1643189 , RGD:13792537
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Becn2
beclin 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr13:87,843,528...87,892,343
Ensembl chr13:87,844,531...87,845,787
G
Ctsd
cathepsin D
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3057045|PMID:15452145) GO_REF:0000107
RGD Ensembl
PMID:15452145
GO_REF:0000107 MGI:3057045
NCBI chr 1:197,527,467...197,539,343
Ensembl chr 1:197,527,467...197,539,488
G
Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
IBA ISO
PMID:21873635 (PMID:21072319)
RGD
PMID:21072319 PMID:21873635
RGD:13792537
NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
G
Emc6
ER membrane protein complex subunit 6
involved_in
ISO IBA
(PMID:23182941) PMID:21873635
RGD
PMID:23182941 PMID:21873635
RGD:13792537
NCBI chr10:57,794,072...57,795,671
Ensembl chr10:57,793,685...57,796,217
G
Epm2a
EPM2A glucan phosphatase, laforin
acts_upstream_of_or_within
ISO
MGI:2182627 (MGI:5913112|PMID:24430976)
RGD
PMID:24430976
MGI:5913112
NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
G
Gabarap
GABA type A receptor-associated protein
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
G
Gabarapl1
GABA type A receptor associated protein like 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
G
Gabarapl2
GABA type A receptor associated protein like 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
G
Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:16888103) (MGI:3656111|PMID:16888103)
RGD
PMID:16888103
MGI:3656111
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
LOC100359937
GABA(A) receptor-associated protein-like 2-like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:89,246,175...89,247,132
Ensembl chr 8:89,246,195...89,247,139
G
LOC120098596
gamma-aminobutyric acid receptor-associated protein-like 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:55,052,756...55,053,109
Ensembl chr19:55,052,756...55,053,109
G
Map1lc3a
microtubule-associated protein 1 light chain 3 alpha
involved_in
ISO IDA IBA
(PMID:24290141) PMID:11060023 PMID:21873635
RGD
PMID:24290141 PMID:11060023 PMID:21873635
RGD:8554284 , RGD:13792537
NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
G
Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
G
Map1lc3b2
microtubule-associated protein 1 light chain 3 beta 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
G
Mtm1
myotubularin 1
acts_upstream_of
ISO
MGI:2450997 (MGI:5510937|PMID:23695157)
RGD
PMID:23695157
MGI:5510937
NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
G
Nsfl1c
NSFL1 cofactor
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
G
Pacs2
phosphofurin acidic cluster sorting protein 2
acts_upstream_of_or_within
ISO
(PMID:23455425)
RGD
PMID:23455425
NCBI chr 6:132,096,992...132,156,702
Ensembl chr 6:132,096,901...132,154,583
G
Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
acts_upstream_of_or_within involved_in
IMP ISO IBA
(MGI:5565574|PMID:24098492) PMID:21873635
RGD
PMID:24098492 PMID:12453151 PMID:21873635
MGI:5565574 , RGD:2303129 , RGD:13792537
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
G
Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:2149116 (MGI:3057045|PMID:15452145)
RGD
PMID:15452145
MGI:3057045
NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
G
Rab19
RAB19, member RAS oncogene family
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:68,157,159...68,166,889
Ensembl chr 4:68,156,881...68,166,886
G
Rab1a
RAB1A, member RAS oncogene family
involved_in
ISO ISS IBA
(PMID:22939626) GO_REF:0000024 PMID:21873635
RGD UniProt
PMID:22939626 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
G
Rab1b
RAB1B, member RAS oncogene family
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
G
Rab23
RAB23, member RAS oncogene family
involved_in
ISO IBA
(PMID:22452336) PMID:21873635
RGD
PMID:22452336 PMID:21873635
RGD:13792537
NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
G
Rab33b
RAB33B, member RAS oncogene family
involved_in
ISO
(MGI:5447922|PMID:18448665)
RGD
PMID:18448665
MGI:5447922
NCBI chr 2:135,528,116...135,538,719
Ensembl chr 2:135,528,116...135,538,719
G
Rab43
RAB43, member RAS oncogene family
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:120,249,878...120,269,174
Ensembl chr 4:120,249,879...120,269,174
G
Rab7a
RAB7A, member RAS oncogene family
involved_in
ISO
(PMID:19956673)
RGD
PMID:19956673
NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
G
Rb1cc1
RB1-inducible coiled-coil 1
involved_in
IBA ISO
PMID:21873635 (MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151) (PMID:19225151), (PMID:28890335)
RGD
PMID:19225151 PMID:19258318 PMID:28890335 PMID:21873635
MGI:3849242 MGI:6810791 , RGD:13792537
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
G
Rufy4
RUN and FYVE domain containing 4
involved_in
IBA ISO
PMID:21873635 (PMID:26416964)
RGD
PMID:26416964 PMID:21873635
RGD:13792537
NCBI chr 9:75,702,937...75,727,719
Ensembl chr 9:75,703,750...75,723,525
G
Sting1
stimulator of interferon response cGAMP interactor 1
involved_in
ISO IBA ISS
(PMID:30568238), (PMID:30842662) (MGI:6305034|PMID:30568238) PMID:21873635 GO_REF:0000024
RGD UniProt
PMID:30568238 PMID:30842662 PMID:21873635
GO_REF:0000024 MGI:6305034 , RGD:13792537
NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
G
Stx12
syntaxin 12
involved_in
ISO
(PMID:24095276)
RGD
PMID:24095276
NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377
G
Synpo2
synaptopodin 2
involved_in
IMP
PMID:23434281
UniProt
PMID:23434281
RGD:12793031
NCBI chr 2:211,217,099...211,371,267
Ensembl chr 2:211,216,783...211,371,267
G
Tcirg1
T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3
acts_upstream_of_or_within
ISO
(MGI:6296816|PMID:23908015)
RGD
PMID:23908015
MGI:6296816
NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
G
Tmem41b
transmembrane protein 41B
involved_in
ISS ISO
GO_REF:0000024 (PMID:30093494), (PMID:30126924), (PMID:30933966)
UniProt RGD
PMID:30093494 PMID:30126924 PMID:30933966
GO_REF:0000024
NCBI chr 1:164,012,585...164,026,967
Ensembl chr 1:164,012,592...164,026,933
G
Tp53inp1
tumor protein p53 inducible nuclear protein 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
G
Tp53inp2
tumor protein p53 inducible nuclear protein 2
involved_in
ISO IEA ISS IBA
(PMID:19056683) GO_REF:0000107 GO_REF:0000024 PMID:21873635
RGD Ensembl UniProt
PMID:19056683 PMID:21873635
GO_REF:0000024 GO_REF:0000107, RGD:13792537
NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
G
Ubqln1
ubiquilin 1
involved_in
IBA IEA ISO
PMID:21873635 GO_REF:0000107 (PMID:20529957)
Ensembl RGD
PMID:20529957 PMID:21873635
GO_REF:0000107, RGD:13792537
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
G
Ubqln2
ubiquilin 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr X:17,853,086...17,856,505
Ensembl chr X:17,853,114...17,856,505
G
Ubxn2a
UBX domain protein 2A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 6:27,884,253...27,912,709
Ensembl chr 6:27,884,680...27,912,649
G
Ubxn2b
UBX domain protein 2B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in
IBA ISO
PMID:21873635 (MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151) (PMID:19225151), (PMID:28890335)
RGD
PMID:19225151 PMID:19258318 PMID:28890335 PMID:21873635
MGI:3849242 MGI:6810791 , RGD:13792537
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Vmp1
vacuole membrane protein 1
involved_in
ISO ISS
(PMID:28890335), (PMID:30093494), (PMID:30933966) GO_REF:0000024
RGD UniProt
PMID:28890335 PMID:30093494 PMID:30933966
GO_REF:0000024
NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
G
Wdr45
WD repeat domain 45
involved_in
ISO IEA ISS
(PMID:28561066) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:28561066
GO_REF:0000024 GO_REF:0000107
NCBI chr X:14,776,280...14,782,197
Ensembl chr X:14,776,293...14,782,202
G
Wdr45b
WD repeat domain 45B
involved_in
ISO
(PMID:28561066)
RGD
PMID:28561066
NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
G
Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
ISO
(PMID:28561066)
RGD
PMID:28561066
NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:20505359), (PMID:28561066), (PMID:28890335)
UniProt RGD
PMID:20505359 PMID:28561066 PMID:28890335
GO_REF:0000024
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
G
Atg14
autophagy related 14
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
G
Becn1
beclin 1
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Chmp1a
charged multivesicular body protein 1A
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
G
Chmp1b
charged multivesicular body protein 1B
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr18:60,740,349...60,742,879
G
Chmp2a
charged multivesicular body protein 2A
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
G
Chmp2b
charged multivesicular body protein 2B
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr11:3,338,007...3,364,357
Ensembl chr11:3,337,494...3,385,181
G
Chmp3
charged multivesicular body protein 3
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
G
Chmp4b
charged multivesicular body protein 4B
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
G
Chmp4c
charged multivesicular body protein 4C
involved_in
ISO IEA
(PMID:17984323) GO_REF:0000107
RGD Ensembl
PMID:17984323
GO_REF:0000107
NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
G
Chmp5
charged multivesicular body protein 5
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
G
Chmp6
charged multivesicular body protein 6
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
G
Chmp7
charged multivesicular body protein 7
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
acts_upstream_of_or_within
ISO
MGI:2388888 (MGI:3690270|PMID:16714284)
RGD
PMID:16714284
MGI:3690270
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
G
Epg5
ectopic P-granules 5 autophagy tethering factor
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:5505596 (MGI:5488852|PMID:23479740)
RGD
PMID:23479740 PMID:21873635
MGI:5488852 , RGD:13792537
NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
G
Lamp2
lysosomal-associated membrane protein 2
involved_in
ISS ISO IBA
GO_REF:0000024 (MGI:5805578|PMID:27628032) PMID:21873635
UniProt RGD
PMID:27628032 PMID:21873635
GO_REF:0000024 MGI:5805578 , RGD:13792537
NCBI chr X:117,173,097...117,222,090
Ensembl chr X:117,057,606...117,260,522
G
Lix1
limb and CNS expressed 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:58,128,961...58,187,554
Ensembl chr 1:58,128,961...58,185,964
G
Lix1l
limb and CNS expressed 1 like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:184,136,018...184,161,918
Ensembl chr 2:184,136,038...184,161,916
G
Map1lc3a
microtubule-associated protein 1 light chain 3 alpha
involved_in
ISO IBA
(PMID:28223137) PMID:21873635
RGD
PMID:28223137 PMID:21873635
RGD:13792537
NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
G
Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
ISO IBA
(PMID:28223137) PMID:21873635
RGD
PMID:28223137 PMID:21873635
RGD:13792537
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
G
Map1lc3b2
microtubule-associated protein 1 light chain 3 beta 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
G
Mcoln1
mucolipin TRP cation channel 1
acts_upstream_of_or_within
ISO
MGI:3794204 (MGI:4839416|PMID:20600908)
RGD
PMID:20600908
MGI:4839416
NCBI chr12:1,560,341...1,574,252
Ensembl chr12:1,560,359...1,574,252
G
Mfsd8
major facilitator superfamily domain containing 8
acts_upstream_of_or_within
ISO
(MGI:6155546|PMID:29514215)
RGD
PMID:29514215
MGI:6155546
NCBI chr 2:123,822,042...123,882,913
Ensembl chr 2:123,816,614...123,857,971
G
Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
G
Pik3r4
phosphoinositide-3-kinase, regulatory subunit 4
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
G
Rubcnl
rubicon like autophagy enhancer
involved_in
ISO IBA
(PMID:28306502), (PMID:30704899) (MGI:6282647|PMID:30704899) PMID:21873635
RGD
PMID:28306502 PMID:30704899 PMID:21873635
MGI:6282647 , RGD:13792537
NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
G
Snap29
synaptosome associated protein 29
involved_in
ISS ISO
GO_REF:0000024 (PMID:23217709)
UniProt RGD
PMID:23217709
GO_REF:0000024
NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
G
Snapin
SNAP-associated protein
acts_upstream_of_or_within
ISO
MGI:3608768 (MGI:4879078|PMID:20920792), (MGI:5504339|PMID:22797916)
RGD
PMID:20920792 PMID:22797916
MGI:4879078 MGI:5504339
NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
G
Snx14
sorting nexin 14
involved_in
ISO IBA
(PMID:25848753) PMID:21873635
RGD
PMID:25848753 PMID:21873635
RGD:13792537
NCBI chr 8:89,283,673...89,390,597
Ensembl chr 8:89,298,114...89,390,580
G
Stx17
syntaxin 17
involved_in
ISO ISS
(PMID:23217709), (PMID:24554770), (PMID:28306502) GO_REF:0000024
RGD UniProt
PMID:23217709 PMID:24554770 PMID:28306502
GO_REF:0000024
NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
G
Tecpr1
tectonin beta-propeller repeat containing 1
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:22342342)
UniProt RGD
PMID:22342342 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
G
Ubqln1
ubiquilin 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:23459205)
Ensembl RGD
PMID:23459205
GO_REF:0000107
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
G
Uvrag
UV radiation resistance associated
involved_in
ISO
(PMID:28306502)
RGD
PMID:28306502
NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
G
Vamp7
vesicle-associated membrane protein 7
NOT|involved_in
ISO
(PMID:23217709)
RGD
PMID:23217709
NCBI chr12:16,728,477...16,764,261
Ensembl chr12:16,728,524...16,764,097
G
Vamp8
vesicle-associated membrane protein 8
involved_in
ISO ISS
(PMID:23217709) GO_REF:0000024
RGD UniProt
PMID:23217709
GO_REF:0000024
NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
G
Vcp
valosin-containing protein
involved_in
ISO IBA ISS
(PMID:20104022) PMID:21873635 GO_REF:0000024
RGD UniProt
PMID:20104022 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
G
Vipas39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
NOT|involved_in
ISO
(PMID:25783203)
RGD
PMID:25783203
NCBI chr 6:106,888,284...106,913,139
Ensembl chr 6:106,888,284...106,913,117
G
Vps16
VPS16 core subunit of CORVET and HOPS complexes
involved_in
ISO
(PMID:25783203)
RGD
PMID:25783203
NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441
G
Vps33a
VPS33A core subunit of CORVET and HOPS complexes
involved_in
ISO IEA
(PMID:24554770), (PMID:25783203) GO_REF:0000107
RGD Ensembl
PMID:24554770 PMID:25783203
GO_REF:0000107
NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393
G
Vps33b
VPS33B, late endosome and lysosome associated
NOT|involved_in
ISO
(PMID:25783203)
RGD
PMID:25783203
NCBI chr 1:134,223,967...134,247,232
Ensembl chr 1:134,223,949...134,246,970
G
Vti1b
vesicle transport through interaction with t-SNAREs 1B
NOT|involved_in
ISO
(PMID:23217709)
RGD
PMID:23217709
NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
NOT|involved_in
ISO
(PMID:20505359)
RGD
PMID:20505359
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
G
Atg14
autophagy related 14
involved_in
ISO
(PMID:25686604)
RGD
PMID:25686604
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
G
Atp2a2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
involved_in
ISO ISS
(PMID:28890335) GO_REF:0000024
RGD UniProt
PMID:28890335
GO_REF:0000024
NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
G
Calm1
calmodulin 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:28890335)
UniProt RGD
PMID:28890335
GO_REF:0000024
NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
G
Calm2
calmodulin 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28890335)
UniProt RGD
PMID:28890335
GO_REF:0000024
NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
G
Calm3
calmodulin 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:28890335)
UniProt RGD
PMID:28890335
GO_REF:0000024
NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
G
Snap29
synaptosome associated protein 29
involved_in
ISO
(PMID:25686604)
RGD
PMID:25686604
NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
G
Stx17
syntaxin 17
involved_in
ISO
(PMID:25686604)
RGD
PMID:25686604
NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
G
Vamp8
vesicle-associated membrane protein 8
involved_in
ISO IEA
(PMID:25686604) GO_REF:0000107
RGD Ensembl
PMID:25686604
GO_REF:0000107
NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
G
Vmp1
vacuole membrane protein 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:28890335)
UniProt RGD
PMID:28890335
GO_REF:0000024
NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
G
Atp13a2
ATPase cation transporting 13A2
involved_in
ISO
(PMID:22186024)
RGD
PMID:22186024
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
G
Gba
glucosylceramidase beta
involved_in
ISO
(MGI:5501380|PMID:23707074)
RGD
PMID:23707074
MGI:5501380
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
G
Pik3c2a
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
acts_upstream_of_or_within
ISO
MGI:2685045 (MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
G
Pik3c2b
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
acts_upstream_of_or_within
ISO
MGI:1203729 (MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612
G
Spg11
SPG11 vesicle trafficking associated, spatacsin
acts_upstream_of_or_within
ISO
(PMID:25365221)
RGD
PMID:25365221
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
G
Ulk3
unc-51 like kinase 3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:57,992,396...58,000,220
Ensembl chr 8:57,992,723...57,999,467
G
Zfyve26
zinc finger FYVE-type containing 26
acts_upstream_of_or_within
ISO
(PMID:25365221)
RGD
PMID:25365221
NCBI chr 6:98,031,874...98,095,538
Ensembl chr 6:98,032,520...98,095,480
G
Rubcnl
rubicon like autophagy enhancer
involved_in
ISO IBA
(PMID:28306502) PMID:21873635
RGD
PMID:28306502 PMID:21873635
RGD:13792537
NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
G
Arl8b
ADP-ribosylation factor like GTPase 8B
involved_in
ISO ISS
(PMID:28325809) GO_REF:0000024
RGD UniProt
PMID:28325809
GO_REF:0000024
NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
G
Atp13a2
ATPase cation transporting 13A2
involved_in
ISO IBA
(PMID:30538141) PMID:21873635 (MGI:6273736|PMID:30538141)
RGD
PMID:30538141 PMID:21873635
MGI:6273736 , RGD:13792537
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
involved_in
ISO
(MGI:5698740|PMID:26450516)
RGD
PMID:26450516
MGI:5698740
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
G
Pip4k2a
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:6159303|PMID:29727621)
UniProt Ensembl RGD
PMID:29727621
GO_REF:0000024 GO_REF:0000107 MGI:6159303
NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
G
Pip4k2b
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
ISS ISO
GO_REF:0000024 (MGI:6159303|PMID:29727621)
UniProt RGD
PMID:29727621
GO_REF:0000024 MGI:6159303
NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
G
Plekhm1
pleckstrin homology and RUN domain containing M1
involved_in
ISO ISS
(PMID:28325809) GO_REF:0000024
RGD UniProt
PMID:28325809
GO_REF:0000024
NCBI chr10:88,313,837...88,366,182
Ensembl chr10:88,314,651...88,362,412
G
Rubcnl
rubicon like autophagy enhancer
involved_in
ISO IBA
(PMID:28306502) PMID:21873635
RGD
PMID:28306502 PMID:21873635
RGD:13792537
NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
G
Vps39
VPS39 subunit of HOPS complex
involved_in
ISO
(PMID:33422265)
RGD
PMID:33422265
NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:22020285)
RGD
PMID:22020285
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
G
Gaa
alpha glucosidase
involved_in
ISO IEA
MGI:2148550 (MGI:2655991|PMID:12739885) GO_REF:0000107
RGD Ensembl
PMID:12739885
GO_REF:0000107 MGI:2655991
NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
G
Gabarapl1
GABA type A receptor associated protein like 1
involved_in
ISO
(MGI:7261139|PMID:20810658)
RGD
PMID:20810658
MGI:7261139
NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
G
Rb1cc1
RB1-inducible coiled-coil 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
G
Stbd1
starch binding domain 1
involved_in
ISO ISS
(PMID:20810658) (MGI:7261139|PMID:20810658) GO_REF:0000024
RGD GO_Central
PMID:20810658
GO_REF:0000024 MGI:7261139
NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443
G
Aup1
AUP1, lipid droplet regulating VLDL assembly factor
involved_in
ISO
(PMID:29902443)
RGD
PMID:29902443
NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346
G
Rab7a
RAB7A, member RAS oncogene family
involved_in
ISO ISS
(MGI:5689086|PMID:23708524) GO_REF:0000024
RGD GO_Central
PMID:23708524
GO_REF:0000024 MGI:5689086
NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
G
Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO
(PMID:21753002), (PMID:25215947)
RGD
PMID:21753002 PMID:25215947
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
G
Arfip2
ADP-ribosylation factor interacting protein 2
involved_in
ISO ISS
(PMID:33773106) GO_REF:0000024
RGD UniProt
PMID:33773106
GO_REF:0000024
NCBI chr 1:159,974,255...159,980,398
Ensembl chr 1:159,974,201...159,980,336
G
Atg13
autophagy related 13
involved_in
IBA ISO
PMID:21873635 (MGI:5607224|PMID:21855797)
RGD
PMID:21855797 PMID:21873635
MGI:5607224 , RGD:13792537
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
G
Atg14
autophagy related 14
involved_in
ISO IBA
(PMID:23878393) PMID:21873635
RGD
PMID:23878393 PMID:21873635
RGD:13792537
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
G
Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
G
Atg4d
autophagy related 4D, cysteine peptidase
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
G
Becn1
beclin 1
involved_in
ISO
(PMID:23878393)
RGD
PMID:23878393
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Gba
glucosylceramidase beta
acts_upstream_of_or_within
ISO
(MGI:5501380|PMID:23707074)
RGD
PMID:23707074
MGI:5501380
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
G
Lrba
LPS responsive beige-like anchor protein
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 2:171,623,668...172,202,576
Ensembl chr 2:171,621,507...172,202,724
G
Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
ISS ISO
GO_REF:0000024 (PMID:28017329)
UniProt RGD
PMID:28017329
GO_REF:0000024
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
G
Ogt
O-linked N-acetylglucosamine (GlcNAc) transferase
involved_in
ISO IEA
(MGI:6694822|PMID:33406421) GO_REF:0000107
RGD Ensembl
PMID:33406421
GO_REF:0000107 MGI:6694822
NCBI chr X:66,771,278...66,816,148
Ensembl chr X:66,771,349...66,816,146
G
Phb2
prohibitin 2
involved_in
ISO IEA ISS
(PMID:28017329) GO_REF:0000107 (MGI:6436385|PMID:28017329) GO_REF:0000024
RGD Ensembl UniProt
PMID:28017329
GO_REF:0000024 GO_REF:0000107 MGI:6436385
NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
G
Pink1
PTEN induced kinase 1
involved_in
ISO
UniProtKB:Q8CGY8 (PMID:33406421)
RGD
PMID:33406421
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in acts_upstream_of_or_within
ISO
(PMID:28017329) MGI:1921624 (MGI:5603233|PMID:24949970)
RGD
PMID:24949970 PMID:28017329
MGI:5603233
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
G
Retreg1
reticulophagy regulator 1
acts_upstream_of_or_within
ISO
(MGI:6370289|PMID:31446166)
RGD
PMID:31446166
MGI:6370289
NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
G
Rimoc1
RAB7A interacting MON1-CCZ1 complex subunit 1
involved_in
ISO
(PMID:34432599)
RGD
PMID:34432599
NCBI chr 2:53,189,787...53,203,981
Ensembl chr 2:53,189,790...53,203,821
G
Spata33
spermatogenesis associated 33
involved_in
ISO
(MGI:6763857|PMID:33087875)
RGD
PMID:33087875
MGI:6763857
NCBI chr19:51,246,514...51,258,894
Ensembl chr19:51,246,514...51,258,894
G
Sqstm1
sequestosome 1
involved_in
IBA ISO
PMID:21873635 UniProtKB:Q9JK66 (PMID:20457763)
RGD
PMID:20457763 PMID:21873635
RGD:13792537
NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
G
Tafazzin
tafazzin, phospholipid-lysophospholipid transacylase
involved_in
ISO
(PMID:33096711) (MGI:6450300|PMID:25919711)
RGD
PMID:25919711 PMID:33096711
MGI:6450300
NCBI chr X:152,065,539...152,076,178
Ensembl chr X:152,065,609...152,074,001
G
Tigar
TP53 induced glycolysis regulatory phosphatase
acts_upstream_of
ISO
MGI:5319187 (MGI:5319065|PMID:22044588)
RGD
PMID:22044588
MGI:5319065
NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
G
Tp53
tumor protein p53
acts_upstream_of
ISO
MGI:1857263 (MGI:5319065|PMID:22044588)
RGD
PMID:22044588
MGI:5319065
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in
ISO
(MGI:5607224|PMID:21855797)
RGD
PMID:21855797
MGI:5607224
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Becn1
beclin 1
acts_upstream_of_or_within
ISO
MGI:2683833 (MGI:5888970|PMID:27994061)
RGD
PMID:27994061
MGI:5888970
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Chmp4b
charged multivesicular body protein 4B
involved_in
ISO
(PMID:21975012)
RGD
PMID:21975012
NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
G
Ehmt2
euchromatic histone lysine methyltransferase 2
acts_upstream_of_or_within
ISO
(MGI:5543871|PMID:23918802)
RGD
PMID:23918802
MGI:5543871
NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
G
Fez1
fasciculation and elongation protein zeta 1
involved_in
ISO ISS
(PMID:25495476) GO_REF:0000024
RGD GO_Central
PMID:25495476
GO_REF:0000024
NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683
G
Fez2
fasciculation and elongation protein zeta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:25495476)
GO_Central RGD
PMID:25495476
GO_REF:0000024
NCBI chr 6:16,654,572...16,694,628
Ensembl chr 6:16,654,614...16,694,626
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
IBA ISO
PMID:21873635 (PMID:23916833)
RGD
PMID:23916833 PMID:21873635
RGD:13792537
NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Mtm1
myotubularin 1
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:2450997 (MGI:5510937|PMID:23695157)
RGD
PMID:23695157 PMID:21873635
MGI:5510937 , RGD:13792537
NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
G
Nupr1
nuclear protein 1, transcriptional regulator
involved_in
ISS ISO
GO_REF:0000024 (PMID:20181828)
UniProt RGD
PMID:20181828
GO_REF:0000024
NCBI chr 1:181,213,292...181,215,327
G
Phf23
PHD finger protein 23
involved_in
ISO IBA ISS
(PMID:25484098) PMID:21873635 GO_REF:0000024
RGD GO_Central
PMID:25484098 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:19279012)
RGD
PMID:19279012
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Scfd1
sec1 family domain containing 1
involved_in
ISO
(PMID:21242315)
RGD
PMID:21242315
NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078
G
Sec22b
SEC22 homolog B, vesicle trafficking protein
involved_in
ISO
(PMID:21242315)
RGD
PMID:21242315
NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026
G
Smcr8
SMCR8-C9orf72 complex subunit
involved_in
ISO
(PMID:28195531)
RGD
PMID:28195531
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
G
Tmem39a
transmembrane protein 39a
involved_in
IBA ISS ISO
PMID:21873635 GO_REF:0000024 (PMID:31806350)
UniProt RGD
PMID:31806350 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
G
Clec16a
C-type lectin domain containing 16A
involved_in
ISO
(PMID:28223137)
RGD
PMID:28223137
NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
Phf23
PHD finger protein 23
involved_in
ISO ISS IBA
(PMID:25484098) GO_REF:0000024 PMID:21873635
RGD GO_Central
PMID:25484098 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782
G
Rubcn
rubicon autophagy regulator
involved_in
IBA ISO
PMID:21873635 (PMID:21062745)
RGD
PMID:21062745 PMID:21873635
RGD:13792537
NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
G
Tmem39a
transmembrane protein 39a
involved_in
ISO IBA ISS
(PMID:31806350) PMID:21873635 GO_REF:0000024
RGD UniProt
PMID:31806350 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
G
Ubqln4
ubiquilin 4
involved_in
ISO
(PMID:23459205)
RGD
PMID:23459205
NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059
G
Hmox1
heme oxygenase 1
acts_upstream_of_or_within
ISO
MGI:2429784 (MGI:5430482|PMID:20705711)
RGD
PMID:20705711
MGI:5430482
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO
(PMID:19640926)
RGD
PMID:19640926
NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Lzts1
leucine zipper tumor suppressor 1
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203
G
Mtor
mechanistic target of rapamycin kinase
acts_upstream_of_or_within involved_in
ISO IBA
(MGI:3690270|PMID:16714284), (MGI:5563734|PMID:23274896) PMID:21873635 (PMID:25327288)
RGD
PMID:16714284 PMID:23274896 PMID:25327288 PMID:21873635
MGI:3690270 MGI:5563734 , RGD:13792537
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Npc1
NPC intracellular cholesterol transporter 1
acts_upstream_of_or_within
ISO
MGI:1857409|MGI:1891828 (MGI:3723543|PMID:17468177)
RGD
PMID:17468177
MGI:3723543
NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
G
Nrbp2
nuclear receptor binding protein 2
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr 7:107,798,642...107,805,230
Ensembl chr 7:107,799,497...107,805,230
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:19279012)
RGD
PMID:19279012
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Poldip2
DNA polymerase delta interacting protein 2
acts_upstream_of_or_within
ISO
MGI:4044390 (MGI:5588624|PMID:24797518)
RGD
PMID:24797518
MGI:5588624
NCBI chr10:63,408,766...63,417,605
Ensembl chr10:63,407,213...63,417,605
G
Qsox1
quiescin sulfhydryl oxidase 1
involved_in
ISO
(PMID:24475161)
RGD
PMID:24475161
NCBI chr13:67,949,780...67,987,434
Ensembl chr13:67,949,780...67,987,459
G
Smcr8
SMCR8-C9orf72 complex subunit
involved_in
ISO
(PMID:28195531)
RGD
PMID:28195531
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
G
Tsc1
TSC complex subunit 1
involved_in
IMP
PMID:23435171
ParkinsonsUK-UCL
PMID:23435171
RGD:10448950
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
G
Tsc2
TSC complex subunit 2
IMP
RGD
PMID:24599401
RGD:11568679
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Usp36
ubiquitin specific peptidase 36
involved_in
ISO
(PMID:22622177)
RGD
PMID:22622177
NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
G
Clec16a
C-type lectin domain containing 16A
involved_in
ISO
(PMID:28223137)
RGD
PMID:28223137
NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
Clec16a
C-type lectin domain containing 16A
acts_upstream_of_or_within
ISO
MGI:5648633 (MGI:5603233|PMID:24949970)
RGD
PMID:24949970
MGI:5603233
NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:19279012)
RGD
PMID:19279012
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Rnf41
ring finger protein 41
acts_upstream_of_or_within
ISO
MGI:1921624 (MGI:5603233|PMID:24949970)
RGD
PMID:24949970
MGI:5603233
NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511
G
Tigar
TP53 induced glycolysis regulatory phosphatase
acts_upstream_of_or_within
ISO
MGI:5319187 (MGI:5319065|PMID:22044588)
RGD
PMID:22044588
MGI:5319065
NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
G
Tp53
tumor protein p53
acts_upstream_of_or_within
ISO
MGI:1857263 (MGI:5319065|PMID:22044588)
RGD
PMID:22044588
MGI:5319065
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Usp30
ubiquitin specific peptidase 30
IMP
RGD
PMID:24896179
RGD:13208875
NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616
G
Htra2
HtrA serine peptidase 2
involved_in
ISO
(MGI:5581539|PMID:24709290)
RGD
PMID:24709290
MGI:5581539
NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095
G
Vps13c
vacuolar protein sorting 13 homolog C
involved_in
ISO ISS
(PMID:26942284) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:26942284
GO_REF:0000024
NCBI chr 8:68,478,366...68,651,893
Ensembl chr 8:68,478,395...68,651,895
G
Hdac6
histone deacetylase 6
involved_in
ISO IEA
UniProtKB:Q9JK66|UniProtKB:Q9Z2V5 (PMID:20457763) GO_REF:0000107
RGD Ensembl
PMID:20457763
GO_REF:0000107
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Mfn2
mitofusin 2
involved_in
ISO
(MGI:5498413|PMID:23620051)
RGD
PMID:23620051
MGI:5498413
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Optn
optineurin
involved_in
ISO IEA
(PMID:25294927) GO_REF:0000107
RGD Ensembl
PMID:25294927
GO_REF:0000107
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
G
Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO
(PMID:19029340)
RGD
PMID:19029340
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
ISO
(MGI:5298125|PMID:22020285)
RGD
PMID:22020285
MGI:5298125
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
G
Pjvk
pejvakin
involved_in
ISO
(MGI:6294584|PMID:30936319)
RGD
PMID:30936319
MGI:6294584
NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
G
Bag3
BAG cochaperone 3
involved_in
ISO
(PMID:18006506)
RGD
PMID:18006506
NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
G
Hspb8
heat shock protein family B (small) member 8
involved_in
ISO
(PMID:18006506)
RGD
PMID:18006506
NCBI chr12:40,176,405...40,205,002
Ensembl chr12:40,176,532...40,191,185
G
Htt
huntingtin
involved_in
IEA ISO
GO_REF:0000107 (PMID:25686248)
Ensembl RGD
PMID:25686248
GO_REF:0000107
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Arsg
arylsulfatase G
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr10:94,412,261...94,551,224
Ensembl chr10:94,447,399...94,542,941
G
Atg2a
autophagy related 2A
involved_in
ISO
(PMID:30952800), (PMID:31271352)
RGD
PMID:30952800 PMID:31271352
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
G
Becn1
beclin 1
IMP
RGD
PMID:25561470
RGD:11561937
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
ISO IEA
(PMID:21072319) GO_REF:0000107
RGD Ensembl
PMID:21072319
GO_REF:0000107
NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
G
Lrsam1
leucine rich repeat and sterile alpha motif containing 1
involved_in
ISO
(PMID:25484098)
RGD
PMID:25484098
NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154
G
Moap1
modulator of apoptosis 1
involved_in
ISO
(PMID:33783314) (MGI:6810697|PMID:33783314)
RGD
PMID:33783314
MGI:6810697
NCBI chr 6:121,882,565...121,884,500
Ensembl chr 6:121,882,366...121,898,643
G
Pip4k2a
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
G
Pip4k2b
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
ISO
(PMID:25578879)
RGD
PMID:25578879
NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
G
Pip4k2c
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
involved_in
ISO
(PMID:25578879)
RGD
PMID:25578879
NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078
G
Rab3gap1
RAB3 GTPase activating protein catalytic subunit 1
involved_in
ISO ISS
(PMID:25495476) GO_REF:0000024
RGD GO_Central
PMID:25495476
GO_REF:0000024
NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
G
Rab3gap2
RAB3 GTPase activating non-catalytic protein subunit 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:25495476)
GO_Central Ensembl RGD
PMID:25495476
GO_REF:0000024 GO_REF:0000107
NCBI chr13:96,757,430...96,828,930
Ensembl chr13:96,757,460...96,829,478
G
Ralb
RAS like proto-oncogene B
involved_in
ISO IEA
(PMID:24056301) GO_REF:0000107
RGD Ensembl
PMID:24056301
GO_REF:0000107
NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202
G
Sh3glb1
SH3 domain -containing GRB2-like endophilin B1
involved_in
ISO
(PMID:21068542) (MGI:5634888|PMID:21068542)
RGD
PMID:21068542
MGI:5634888
NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
G
Snx18
sorting nexin 18
involved_in
ISO
(PMID:29437695)
RGD
PMID:29437695
NCBI chr 2:45,232,325...45,258,345
Ensembl chr 2:45,232,325...45,258,345
G
Snx30
sorting nexin family member 30
involved_in
ISO IBA
(PMID:32513819) PMID:21873635
RGD
PMID:32513819 PMID:21873635
RGD:13792537
NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631
G
Snx4
sorting nexin 4
involved_in
ISO IBA
(PMID:32513819), (PMID:33468622) PMID:21873635
RGD
PMID:32513819 PMID:33468622 PMID:21873635
RGD:13792537
NCBI chr11:67,460,872...67,518,143
Ensembl chr11:67,460,870...67,518,174
G
Snx7
sorting nexin 7
involved_in
ISO
(PMID:32513819)
RGD
PMID:32513819
NCBI chr 2:205,843,164...205,927,737
Ensembl chr 2:205,842,837...205,927,763
G
Ulk1
unc-51 like autophagy activating kinase 1
IMP
RGD
PMID:23448468
RGD:13208863
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Wdr45
WD repeat domain 45
involved_in
ISO IEA ISS
(PMID:31271352) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:31271352
GO_REF:0000024 GO_REF:0000107
NCBI chr X:14,776,280...14,782,197
Ensembl chr X:14,776,293...14,782,202
G
Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
ISO
(PMID:31271352)
RGD
PMID:31271352
NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
G
AABR07025818.1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
Ensembl chr16:48,598,506...48,599,444
G
Adrb2
adrenoceptor beta 2
involved_in
ISO ISS
(PMID:23708524) GO_REF:0000024
RGD GO_Central
PMID:23708524
GO_REF:0000024
NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
G
Calcoco2
calcium binding and coiled-coil domain 2
involved_in
ISO
(PMID:25771791)
RGD
PMID:25771791
NCBI chr10:81,055,467...81,069,298
G
Clec16a
C-type lectin domain containing 16A
acts_upstream_of_or_within
ISO
MGI:5648633 (MGI:5603233|PMID:24949970)
RGD
PMID:24949970
MGI:5603233
NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
Fyco1
FYVE and coiled-coil domain autophagy adaptor 1
involved_in
ISO IBA
(PMID:26468287) PMID:21873635
RGD
PMID:26468287 PMID:21873635
RGD:13792537
NCBI chr 8:123,412,105...123,479,315
Ensembl chr 8:123,412,112...123,479,021
G
Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:16888103) (MGI:3656111|PMID:16888103)
RGD
PMID:16888103
MGI:3656111
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
Smcr8
SMCR8-C9orf72 complex subunit
involved_in
ISO
(PMID:28195531)
RGD
PMID:28195531
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
G
Adrb2
adrenoceptor beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:23708524)
GO_Central RGD
PMID:23708524
GO_REF:0000024
NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
G
Htt
huntingtin
involved_in
ISO IEA
(PMID:25686248) GO_REF:0000107
RGD Ensembl
PMID:25686248
GO_REF:0000107
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Sesn2
sestrin 2
acts_upstream_of_or_within
ISO
MGI:3587950 (MGI:5444071|PMID:22958918)
RGD
PMID:22958918
MGI:5444071
NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
G
Sptlc1
serine palmitoyltransferase, long chain base subunit 1
acts_upstream_of_or_within
ISO
(PMID:25332431)
RGD
PMID:25332431
NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
G
Sptlc2
serine palmitoyltransferase, long chain base subunit 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:25332431) GO_REF:0000107
RGD Ensembl
PMID:25332431
GO_REF:0000107
NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
G
Bnip3
BCL2 interacting protein 3
acts_upstream_of_or_within
ISO
UniProtKB:O60238 (PMID:19273585)
RGD
PMID:19273585
NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
G
Bnip3l
BCL2 interacting protein 3 like
acts_upstream_of_or_within
ISO
UniProtKB:Q12983 (PMID:19273585)
RGD
PMID:19273585
NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
G
Dcn
decorin
acts_upstream_of_or_within
ISO
UniProtKB:P35968 (PMID:23798385)
RGD
PMID:23798385
NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
G
Epm2a
EPM2A glucan phosphatase, laforin
acts_upstream_of_or_within
ISO
MGI:102548|MGI:2182627 (MGI:4457987|PMID:20453062) (PMID:20453062)
RGD
PMID:20453062
MGI:4457987
NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
G
Gnai3
G protein subunit alpha i3
involved_in
ISO
(PMID:12642577)
RGD
PMID:12642577
NCBI chr 2:195,742,765...195,780,720
Ensembl chr 2:195,742,642...195,780,742
G
Gpsm1
G-protein signaling modulator 1
involved_in
ISO
(PMID:12642577)
RGD
PMID:12642577
NCBI chr 3:9,140,816...9,167,828
Ensembl chr 3:9,128,636...9,167,827
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386679 (MGI:3847365|PMID:19273585)
Ensembl RGD
PMID:19273585
GO_REF:0000107 MGI:3847365
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hmox1
heme oxygenase 1
acts_upstream_of_or_within
ISO
MGI:2429784 (MGI:5430482|PMID:20705711)
RGD
PMID:20705711
MGI:5430482
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
G
Ikbkg
inhibitor of nuclear factor kappa B kinase regulatory subunit gamma
involved_in
ISO
(MGI:5819337|PMID:23778976)
RGD
PMID:23778976
MGI:5819337
NCBI chr X:152,216,485...152,241,476
Ensembl chr X:152,216,596...152,239,499
G
Il4
interleukin 4
involved_in
IBA ISO ISS
PMID:21873635 (MGI:5702366|PMID:26416964) GO_REF:0000024
RGD UniProt
PMID:26416964 PMID:21873635
GO_REF:0000024 MGI:5702366 , RGD:13792537
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Kdr
kinase insert domain receptor
acts_upstream_of_or_within involved_in
ISO IEA
UniProtKB:P07585 (PMID:23798385) GO_REF:0000107
RGD Ensembl
PMID:23798385
GO_REF:0000107
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Larp1
La ribonucleoprotein 1, translational regulator
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
G
Map3k7
mitogen activated protein kinase kinase kinase 7
involved_in
ISO
(MGI:5819337|PMID:23778976)
RGD
PMID:23778976
MGI:5819337
NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
G
Pafah1b2
platelet-activating factor acetylhydrolase 1b, catalytic subunit 2
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr 8:46,260,069...46,312,073
Ensembl chr 8:46,261,064...46,279,833
G
Pim2
Pim-2 proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
(MGI:4361989|PMID:17476689)
RGD
PMID:17476689
MGI:4361989
NCBI chr X:14,617,582...14,622,851
Ensembl chr X:14,617,582...14,622,851
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:20871098)
RGD
PMID:20871098
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Rab12
RAB12, member RAS oncogene family
involved_in
ISO
(MGI:5574288|PMID:23357852)
RGD
PMID:23357852
MGI:5574288
NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
G
RGD1359108
similar to RIKEN cDNA 3110043O21
involved_in
ISO IEA ISS
UniProtKB:Q96DA2 (PMID:27103069), (PMID:27334615) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27103069 PMID:27334615
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
G
Rufy4
RUN and FYVE domain containing 4
involved_in
IBA ISO
PMID:21873635 (PMID:26416964)
RGD
PMID:26416964 PMID:21873635
RGD:13792537
NCBI chr 9:75,702,937...75,727,719
Ensembl chr 9:75,703,750...75,723,525
G
Scoc
short coiled-coil protein
involved_in
ISO ISS
(PMID:22354037) GO_REF:0000024
RGD GO_Central
PMID:22354037
GO_REF:0000024
NCBI chr19:24,659,651...24,689,236
Ensembl chr19:24,659,651...24,693,217
G
Sesn1
sestrin 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
G
Sesn2
sestrin 2
involved_in
ISO IBA
(PMID:23274085) PMID:21873635
RGD
PMID:23274085 PMID:21873635
RGD:13792537
NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
G
Sesn3
sestrin 3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842
G
Sirt1
sirtuin 1
involved_in
ISO
(PMID:18296641) (MGI:3776699|PMID:18296641), (MGI:4940431|PMID:21189328)
RGD
PMID:18296641 PMID:21189328
MGI:3776699 MGI:4940431
NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
G
Sting1
stimulator of interferon response cGAMP interactor 1
involved_in
ISO IBA ISS
(PMID:30568238), (PMID:30842662) PMID:21873635 (MGI:6305034|PMID:30568238) GO_REF:0000024
RGD UniProt
PMID:30568238 PMID:30842662 PMID:21873635
GO_REF:0000024 MGI:6305034 , RGD:13792537
NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
G
Supt5h
SPT5 homolog, DSIF elongation factor subunit
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr 1:83,586,713...83,616,971
Ensembl chr 1:83,586,718...83,616,892
G
Tbk1
TANK-binding kinase 1
involved_in
ISO
(PMID:27103069)
RGD
PMID:27103069
NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
G
Trim13
tripartite motif-containing 13
involved_in
ISO IBA
(PMID:22178386) PMID:21873635
RGD
PMID:22178386 PMID:21873635
RGD:13792537
NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677
G
Tsc1
TSC complex subunit 1
IDA
RGD
PMID:23435171
RGD:10448950
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
G
Tsc2
TSC complex subunit 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:4457987|PMID:20453062) (MGI:5819337|PMID:23778976) UniProtKB:Q61037 (PMID:23778976)
Ensembl RGD
PMID:20453062 PMID:23778976
GO_REF:0000107 MGI:4457987 MGI:5819337
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Wac
WW domain containing adaptor with coiled-coil
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
G
Wdr24
WD repeat domain 24
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:14,844,089...14,848,871
Ensembl chr10:14,843,728...14,848,864
G
Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO
(PMID:30217973)
RGD
PMID:30217973
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
G
Cers1
ceramide synthase 1
involved_in
ISO
(PMID:22922758)
RGD
PMID:22922758
NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
G
Prkn
parkin RBR E3 ubiquitin protein ligase
IMP
RGD
PMID:28608965
RGD:13432560
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
G
Slc25a4
solute carrier family 25 member 4
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:6407583|PMID:31618756) GO_REF:0000107
UniProt RGD Ensembl
PMID:31618756
GO_REF:0000024 GO_REF:0000107 MGI:6407583
NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
G
Slc25a5
solute carrier family 25 member 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:6407583|PMID:31618756)
UniProt RGD
PMID:31618756
GO_REF:0000024 MGI:6407583
NCBI chr X:116,031,896...116,034,963
Ensembl chr X:116,031,803...116,034,967
G
Vdac1
voltage-dependent anion channel 1
involved_in
ISO
(PMID:32047033)
RGD
PMID:32047033
NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
G
Vps13d
vacuolar protein sorting 13 homolog D
involved_in
ISO
(PMID:29307555)
RGD
PMID:29307555
NCBI chr 5:156,830,509...157,055,895
Ensembl chr 5:156,830,512...157,055,891
G
Cdc37
cell division cycle 37, HSP90 cochaperone
involved_in
ISO
(MGI:5607224|PMID:21855797)
RGD
PMID:21855797
MGI:5607224
NCBI chr 8:19,677,400...19,690,761
Ensembl chr 8:19,671,938...19,690,809
G
Hdac6
histone deacetylase 6
involved_in
ISO
UniProtKB:Q9JK66 (MGI:5616310|PMID:20457763)
RGD
PMID:20457763
MGI:5616310
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:30217973)
RGD
PMID:30217973
NCBI chr X:20,871,278...21,001,378
Ensembl chr X:20,873,795...21,001,262
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:20871098)
RGD
PMID:20871098
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO
(PMID:20457763), (PMID:20871098), (PMID:23212910)
RGD
PMID:20457763 PMID:20871098 PMID:23212910
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
G
Tomm7
translocase of outer mitochondrial membrane 7
involved_in
ISO
(PMID:24270810)
RGD
PMID:24270810
NCBI chr 4:11,305,122...11,311,963
Ensembl chr 4:11,305,110...11,311,962
G
Vdac1
voltage-dependent anion channel 1
involved_in
ISO
(PMID:32047033)
RGD
PMID:32047033
NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
G
Lrsam1
leucine rich repeat and sterile alpha motif containing 1
involved_in
ISO
(PMID:23245322)
RGD
PMID:23245322
NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
G
Nod1
nucleotide-binding oligomerization domain containing 1
acts_upstream_of_or_within
ISO
MGI:2674231 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:3529594 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
G
Optn
optineurin
involved_in
ISO IEA
(PMID:21617041) GO_REF:0000107
RGD Ensembl
PMID:21617041
GO_REF:0000107
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2660793 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
G
Rnf31
ring finger protein 31
involved_in
ISO
(PMID:28481331)
RGD
PMID:28481331
NCBI chr15:29,083,047...29,095,328
Ensembl chr15:29,083,631...29,101,915
G
Tbk1
TANK-binding kinase 1
involved_in
ISO
(MGI:5645201|PMID:21617041)
RGD
PMID:21617041
MGI:5645201
NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
G
Tlr2
toll-like receptor 2
acts_upstream_of_or_within
ISO
MGI:2674036 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
G
Atg16l1
autophagy related 16-like 1
acts_upstream_of_or_within
ISO
(MGI:5605433|PMID:24954904)
RGD
PMID:24954904
MGI:5605433
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Atg5
autophagy related 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:5543871|PMID:23918802)
Ensembl RGD
PMID:23918802
GO_REF:0000107 MGI:5543871
NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
G
Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:28389568)
RGD
PMID:28389568
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
acts_upstream_of_or_within
ISO
(MGI:5605433|PMID:24954904)
RGD
PMID:24954904
MGI:5605433
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
G
Arfip2
ADP-ribosylation factor interacting protein 2
involved_in
ISO ISS
(PMID:33773106) GO_REF:0000024
RGD UniProt
PMID:33773106
GO_REF:0000024
NCBI chr 1:159,974,255...159,980,398
Ensembl chr 1:159,974,201...159,980,336
G
Atg13
autophagy related 13
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
G
Atg16l1
autophagy related 16-like 1
acts_upstream_of_or_within
ISO
PR:Q80W47 (MGI:5605433|PMID:24954904)
RGD
PMID:24954904
MGI:5605433
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
G
Atg4d
autophagy related 4D, cysteine peptidase
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
G
Atg9a
autophagy related 9A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
G
Atg9b
autophagy related 9B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
G
Lrba
LPS responsive beige-like anchor protein
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 2:171,623,668...172,202,576
Ensembl chr 2:171,621,507...172,202,724
G
Mfn2
mitofusin 2
acts_upstream_of_or_within
ISO
(PMID:23455425)
RGD
PMID:23455425
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Pacs2
phosphofurin acidic cluster sorting protein 2
acts_upstream_of_or_within
ISO
(PMID:23455425)
RGD
PMID:23455425
NCBI chr 6:132,096,992...132,156,702
Ensembl chr 6:132,096,901...132,154,583
G
Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
acts_upstream_of_or_within
ISO
(MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
G
Stx17
syntaxin 17
acts_upstream_of_or_within
ISO
(PMID:23455425)
RGD
PMID:23455425
NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
G
Trappc8
trafficking protein particle complex subunit 8
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr18:12,103,874...12,180,422
Ensembl chr18:12,103,877...12,180,107
G
Wdr45
WD repeat domain 45
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr X:14,776,280...14,782,197
Ensembl chr X:14,776,293...14,782,202
G
Wdr45b
WD repeat domain 45B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
involved_in acts_upstream_of_or_within
ISO IBA ISS
(PMID:28561066) PR:Q8C0J2 (MGI:5605433|PMID:24954904) PMID:21873635 GO_REF:0000024
RGD UniProt
PMID:24954904 PMID:28561066 PMID:21873635
GO_REF:0000024 MGI:5605433 , RGD:13792537
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
G
Ift20
intraflagellar transport 20
involved_in
ISO
(MGI:5527012|PMID:24089209)
RGD
PMID:24089209
MGI:5527012
NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
G
Ift88
intraflagellar transport 88
involved_in
ISO
(MGI:5527012|PMID:24089209)
RGD
PMID:24089209
MGI:5527012
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
G
Mtmr3
myotubularin related protein 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:25578879)
Ensembl RGD
PMID:25578879
GO_REF:0000107
NCBI chr14:79,340,523...79,460,947
Ensembl chr14:79,340,513...79,461,041
G
Pikfyve
phosphoinositide kinase, FYVE-type zinc finger containing
involved_in
ISO
(PMID:25578879)
RGD
PMID:25578879
NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868
G
Rab1b
RAB1B, member RAS oncogene family
involved_in
ISO
(PMID:20545908)
RGD
PMID:20545908
NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
G
RGD1359108
similar to RIKEN cDNA 3110043O21
involved_in
ISO IEA ISS
(PMID:27334615) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27334615
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
G
Rnf5
ring finger protein 5
acts_upstream_of_or_within
ISO
MGI:3775796 (MGI:5469257|PMID:23093945)
RGD
PMID:23093945
MGI:5469257
NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985
G
Tbc1d12
TBC1 domain family, member 12
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:236,603,597...236,685,859
Ensembl chr 1:236,603,607...236,685,859
G
Tbc1d14
TBC1 domain family, member 14
involved_in
ISO IEA IBA
(PMID:22613832) GO_REF:0000107 PMID:21873635
RGD Ensembl
PMID:22613832 PMID:21873635
GO_REF:0000107, RGD:13792537
NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183
G
Ubqln2
ubiquilin 2
involved_in
ISO
(PMID:20529957)
RGD
PMID:20529957
NCBI chr X:17,853,086...17,856,505
Ensembl chr X:17,853,114...17,856,505
G
Atg12
autophagy related 12
involved_in
ISO
(PMID:22342342)
RGD
PMID:22342342
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
G
Atg5
autophagy related 5
involved_in
ISO IEA
(PMID:22342342) GO_REF:0000107
RGD Ensembl
PMID:22342342
GO_REF:0000107
NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
G
Clec16a
C-type lectin domain containing 16A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
involved_in
ISO
(MGI:5698740|PMID:26450516)
RGD
PMID:26450516
MGI:5698740
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
G
Tbc1d25
TBC1 domain family, member 25
involved_in
ISO
(PMID:21383079)
RGD
PMID:21383079
NCBI chr X:14,314,095...14,339,171
Ensembl chr X:14,314,414...14,338,275
G
Tecpr1
tectonin beta-propeller repeat containing 1
involved_in
ISO
(PMID:22342342)
RGD
PMID:22342342
NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
G
Atp13a2
ATPase cation transporting 13A2
involved_in
IMP IBA ISO
PMID:21873635 (PMID:22186024)
RGD
PMID:22186024 PMID:22186024 PMID:21873635
RGD:13442482 , RGD:13792537
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
involved_in
ISO
(MGI:6383362|PMID:25878248)
RGD
PMID:25878248
MGI:6383362
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
G
Atg14
autophagy related 14
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
G
Atp13a2
ATPase cation transporting 13A2
involved_in
ISO
(PMID:22198378)
RGD
PMID:22198378
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
G
Atp6v0a1
ATPase H+ transporting V0 subunit a1
involved_in
ISO IEA
(PMID:22982048) GO_REF:0000107
RGD Ensembl
PMID:22982048
GO_REF:0000107
NCBI chr10:85,935,802...85,989,901
Ensembl chr10:85,935,854...85,989,895
G
Becn1
beclin 1
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Hdac6
histone deacetylase 6
involved_in
ISO IEA
(PMID:16192271) GO_REF:0000107
RGD Ensembl
PMID:16192271
GO_REF:0000107
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
G
Pik3r4
phosphoinositide-3-kinase, regulatory subunit 4
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
G
Prkaa2
protein kinase AMP-activated catalytic subunit alpha 2
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5619439|PMID:23332761) GO_REF:0000107
UniProt RGD Ensembl
PMID:23332761
GO_REF:0000024 GO_REF:0000107 MGI:5619439
NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
G
Ubqln1
ubiquilin 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
G
Ubqln2
ubiquilin 2
involved_in
IBA ISO
PMID:21873635 (PMID:20529957)
RGD
PMID:20529957 PMID:21873635
RGD:13792537
NCBI chr X:17,853,086...17,856,505
Ensembl chr X:17,853,114...17,856,505
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in
ISO
(PMID:20921139)
RGD
PMID:20921139
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Atg2a
autophagy related 2A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
G
Atg2b
autophagy related 2B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
G
Ddrgk1
DDRGK domain containing 1
involved_in
ISO
(PMID:32160526)
RGD
PMID:32160526
NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
G
Rb1cc1
RB1-inducible coiled-coil 1
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:2176173|MGI:3526069 (MGI:6323456|PMID:31006538)
RGD
PMID:31006538 PMID:21873635
MGI:6323456 , RGD:13792537
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
G
Retreg1
reticulophagy regulator 1
involved_in acts_upstream_of_or_within
ISO IEA IBA ISS
(PMID:26040720) (MGI:6790058|PMID:34338405) GO_REF:0000002 (MGI:5646045|PMID:26040720) PMID:21873635 GO_REF:0000024
RGD InterPro GO_Central
PMID:26040720 PMID:34338405 PMID:21873635
GO_REF:0000002 GO_REF:0000024 MGI:5646045 MGI:6790058 , RGD:13792537
NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
G
Retreg2
reticulophagy regulator family member 2
acts_upstream_of_or_within
ISO
(MGI:6790058|PMID:34338405)
RGD
PMID:34338405
MGI:6790058
NCBI chr 9:76,640,282...76,646,400
Ensembl chr 9:76,640,319...76,646,395
G
Retreg3
reticulophagy regulator family member 3
acts_upstream_of_or_within
ISO
(MGI:6790058|PMID:34338405)
RGD
PMID:34338405
MGI:6790058
NCBI chr10:86,028,767...86,052,575
Ensembl chr10:86,028,774...86,052,692
G
Snx30
sorting nexin family member 30
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631
G
Sting1
stimulator of interferon response cGAMP interactor 1
involved_in
IBA ISO ISS
PMID:21873635 (MGI:5925643|PMID:29056340) GO_REF:0000024
RGD UniProt
PMID:29056340 PMID:21873635
GO_REF:0000024 MGI:5925643 , RGD:13792537
NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
G
Tex264
testis expressed 264
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:31006537), (PMID:31006538) PMID:21873635 (PMID:31006538)
RGD
PMID:31006537 PMID:31006538 PMID:21873635
RGD:13792537
NCBI chr 8:107,295,806...107,322,858
Ensembl chr 8:107,295,806...107,323,232
G
Uba5
ubiquitin-like modifier activating enzyme 5
involved_in
ISO ISS
(PMID:32160526) GO_REF:0000024
RGD UniProt
PMID:32160526
GO_REF:0000024
NCBI chr 8:104,665,241...104,680,850
Ensembl chr 8:104,665,046...104,680,894
G
Ufc1
ubiquitin-fold modifier conjugating enzyme 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:32160526)
UniProt RGD
PMID:32160526
GO_REF:0000024
NCBI chr13:83,709,330...83,719,762
Ensembl chr13:83,709,330...83,716,076
G
Ufl1
Ufm1-specific ligase 1
involved_in
ISO ISS
(PMID:32160526) GO_REF:0000024
RGD UniProt
PMID:32160526
GO_REF:0000024
NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
G
Ufm1
ubiquitin-fold modifier 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:32160526)
UniProt RGD
PMID:32160526
GO_REF:0000024
NCBI chr 2:137,969,476...137,977,620
Ensembl chr 2:137,966,678...137,978,089 Ensembl chr 2:137,966,678...137,978,089
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Zfp622
zinc finger protein 622
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:76,479,605...76,494,405
Ensembl chr 2:76,335,609...76,493,898
G
Sqstm1
sequestosome 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:22622177)
UniProt RGD
PMID:22622177
GO_REF:0000024
NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:22020285)
RGD
PMID:22020285
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
G
Stbd1
starch binding domain 1
involved_in
ISO IEA
MGI:6356543 (MGI:5803726|PMID:27358407) GO_REF:0000107 MGI:6356543 (MGI:5803726|PMID:27358407), (MGI:7261139|PMID:20810658)
RGD Ensembl
PMID:20810658 PMID:27358407
GO_REF:0000107 MGI:5803726 MGI:7261139
NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443
G
AABR07025818.1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
Ensembl chr16:48,598,506...48,599,444
G
Atg16l1
autophagy related 16-like 1
acts_upstream_of_or_within
ISO
PR:Q80W47 (MGI:5605433|PMID:24954904)
RGD
PMID:24954904
MGI:5605433
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Calcoco2
calcium binding and coiled-coil domain 2
involved_in
ISO
(PMID:25771791)
RGD
PMID:25771791
NCBI chr10:81,055,467...81,069,298
G
Lgals8
galectin 8
involved_in
ISO ISS
(PMID:22246324), (PMID:28077878) GO_REF:0000024
RGD GO_Central
PMID:22246324 PMID:28077878
GO_REF:0000024
NCBI chr17:58,024,652...58,052,764
Ensembl chr17:58,028,105...58,052,764
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of
ISO
MGI:1346858 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
G
Nod1
nucleotide-binding oligomerization domain containing 1
acts_upstream_of involved_in
ISO IEA
MGI:2674231 (MGI:5299952|PMID:22033934) GO_REF:0000107
RGD Ensembl
PMID:22033934
GO_REF:0000107 MGI:5299952
NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of involved_in
ISO IEA
MGI:3529594 (MGI:5299952|PMID:22033934) GO_REF:0000107
RGD Ensembl
PMID:22033934
GO_REF:0000107 MGI:5299952
NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of involved_in
ISO IEA
MGI:2660793 (MGI:5299952|PMID:22033934) GO_REF:0000107
RGD Ensembl
PMID:22033934
GO_REF:0000107 MGI:5299952
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
G
Rnf213
ring finger protein 213
involved_in
ISO
(PMID:34012115)
RGD
PMID:34012115
NCBI chr10:104,656,329...104,755,669
Ensembl chr10:104,656,883...104,757,918
G
Tlr2
toll-like receptor 2
acts_upstream_of
ISO
MGI:2674036 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
acts_upstream_of_or_within
ISO
PR:Q8C0J2 (MGI:5605433|PMID:24954904)
RGD
PMID:24954904
MGI:5605433
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all