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Gene: Rnf5 (ring finger protein 5) Rattus norvegicus
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Symbol: Rnf5
Name: ring finger protein 5
RGD ID: 1588458
Description: Predicted to have identical protein binding activity; ubiquitin protein ligase activity; and ubiquitin-like protein conjugating enzyme binding activity. Predicted to be involved in several processes, including cellular protein metabolic process; protein destabilization; and regulation of autophagy. Predicted to localize to endoplasmic reticulum and membrane. Orthologous to human RNF5 (ring finger protein 5); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 2-methoxyethanol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: E3 ubiquitin-protein ligase RNF5; ing finger protein 5 pseudogene; MGC109637; ring finger protein 5, E3 ubiquitin protein ligase; RING-type E3 ubiquitin transferase RNF5
Orthologs:
Homo sapiens (human) : RNF5 (ring finger protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Rnf5 (ring finger protein 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnf5 (ring finger protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : RNF5 (ring finger protein 5)
Canis lupus familiaris (dog) : RNF5 (ring finger protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnf5 (ring finger protein 5)
Sus scrofa (pig) : RNF5 (ring finger protein 5)
Chlorocebus sabaeus (African green monkey) : RNF5 (ring finger protein 5)
Heterocephalus glaber (naked mole-rat) : Rnf5 (ring finger protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0204,366,244 - 4,368,690 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,366,246 - 4,368,693 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,445,600 - 6,448,046 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,248,002 - 4,250,448 (+)NCBIRGSC3.4rn4RGSC3.4
Celera203,882,218 - 3,884,677 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rnf5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1588458
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.