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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:mitophagy
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Accession:GO:0000423 term browser browse the term
Definition:The selective autophagy process in which a mitochondrion is degraded by macroautophagy.
Comment:Note that this terms refers to the macroautophagy process and is named by common usage. Be aware that there are a separate micromitophagy and mitophagy by induced vacuole formation processes.
Synonyms:exact_synonym: macromitophagy
 xref: Reactome:R-HSA-5205647 "Mitophagy";   Wikipedia:Mitophagy



show annotations for term's descendants           Sort by:
mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001519.1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Abi2 abl-interactor 2 involved_in ISO (PMID:38081847) RGD PMID:38081847 NCBI chr 9:69,321,072...69,490,630
Ensembl chr 9:69,321,150...69,490,597
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO
IEA
IBA
UniProtKB:O60260|UniProtKB:Q99MQ3 (PMID:21753002), (PMID:25215947)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:21753002 PMID:25215947 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:98,156,626...98,345,876
Ensembl chr 3:98,156,652...98,345,872
JBrowse link
G Arfip2 ARF interacting protein 2 involved_in ISO
IEA
ISS
(PMID:33773106)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:33773106 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:169,387,484...169,392,290
Ensembl chr 1:169,387,485...169,392,166
JBrowse link
G Arhgap26 Rho GTPase activating protein 26 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:38081847)
GO_REF:0000107
RGD
Ensembl
PMID:38081847 GO_REF:0000107 NCBI chr18:30,702,602...31,489,047
Ensembl chr18:31,089,787...31,489,047
JBrowse link
G Atg10 autophagy related 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:23,843,695...24,133,459
Ensembl chr 2:23,844,482...24,133,368
JBrowse link
G Atg13 autophagy related 13 involved_in IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000107
(PMID:21855797)
GO_Central
Ensembl
RGD
PMID:21855797 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:98,102,831...98,136,741
Ensembl chr 3:98,101,552...98,136,743
JBrowse link
G Atg14 autophagy related 14 involved_in ISO
IEA
IBA
(PMID:23878393)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:23878393 GO_REF:0000033 GO_REF:0000107 NCBI chr15:23,275,457...23,306,817
Ensembl chr15:23,275,457...23,306,815
JBrowse link
G Atg4a autophagy related 4A, cysteine peptidase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:109,453,712...109,553,758
Ensembl chr  X:109,453,689...109,553,760
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase involved_in ISO
IBA
IEA
(PMID:33773106)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:33773106 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:101,729,772...101,761,456
Ensembl chr 9:101,726,782...101,761,622
JBrowse link
G Atg4c autophagy related 4C, cysteine peptidase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:118,977,594...119,050,894
Ensembl chr 5:118,982,918...119,052,695
JBrowse link
G Atg4d autophagy related 4D, cysteine peptidase involved_in ISO
IEA
IBA
(PMID:33773106)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:33773106 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:28,083,902...28,093,491
Ensembl chr 8:28,083,936...28,093,491
JBrowse link
G Atg5 autophagy related 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:49,380,835...49,471,826
Ensembl chr20:49,380,813...49,471,821
JBrowse link
G Atg7 autophagy related 7 involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:20080761)
UniProtKB:Q9BXM7 (PMID:19279012)
Ensembl
GO_Central
RGD
PMID:19279012 PMID:20080761 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:149,391,390...149,598,319
JBrowse link
G Atg9a autophagy related 9A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:84,126,071...84,136,723
Ensembl chr 9:84,126,071...84,136,666
JBrowse link
G Atg9b autophagy related 9B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:11,678,548...11,686,097
Ensembl chr 4:11,678,299...11,686,079
JBrowse link
G Bcl2l13 Bcl2-like 13 acts_upstream_of_or_within ISO
IEA
(PMID:31266807)
GO_REF:0000107
RGD
Ensembl
PMID:31266807 GO_REF:0000107 NCBI chr 4:155,728,284...155,785,058
Ensembl chr 4:155,728,284...155,781,158
JBrowse link
G Becn1 beclin 1 involved_in ISO
IEA
IBA
(PMID:23878393), (PMID:25215947)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:23878393 PMID:25215947 GO_REF:0000033 GO_REF:0000107 NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,731,650...86,747,002
JBrowse link
G Becn2 beclin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:90,375,186...90,424,533
Ensembl chr13:90,375,186...90,378,488
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO
IEA
(PMID:22505714)
GO_REF:0000107
RGD
Ensembl
PMID:22505714 GO_REF:0000107 NCBI chr 1:203,137,778...203,154,962
Ensembl chr 1:203,137,778...203,154,962
JBrowse link
G Clec16a C-type lectin domain containing 16A involved_in ISO
IEA
(PMID:35604110)
GO_REF:0000107
RGD
Ensembl
PMID:35604110 GO_REF:0000107 NCBI chr10:5,434,725...5,631,246
Ensembl chr10:5,434,725...5,630,619
JBrowse link
G Ctsk cathepsin K involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 2:185,747,548...185,758,512
Ensembl chr 2:185,747,165...185,765,582
JBrowse link
G Dele1 DAP3 binding cell death enhancer 1 acts_upstream_of_or_within ISO (PMID:38340717) RGD PMID:38340717 NCBI chr18:30,325,369...30,349,285
Ensembl chr18:30,336,308...30,349,938
JBrowse link
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 acts_upstream_of_or_within ISO (PMID:38340717) RGD PMID:38340717 NCBI chr12:15,824,431...15,858,266
Ensembl chr12:15,825,124...15,858,281
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISO
IEA
ISS
(PMID:38340717)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:38340717 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:103,405,880...103,430,549
Ensembl chr 6:103,405,788...103,431,649
JBrowse link
G Fbxl4 F-box and leucine-rich repeat protein 4 acts_upstream_of_or_within ISO (PMID:22505714) RGD PMID:22505714 NCBI chr 5:40,752,513...40,826,154
Ensembl chr 5:40,752,521...40,850,826
JBrowse link
G Fundc1 FUN14 domain containing 1 involved_in ISO
IEA
UniProtKB:P09936 (PMID:34244144)
GO_REF:0000107
RGD
Ensembl
PMID:34244144 GO_REF:0000107 NCBI chr  X:7,666,787...7,683,443
Ensembl chr  X:7,666,759...7,683,441
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,213,465...55,216,787
Ensembl chr10:55,212,075...55,216,154
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:164,666,332...164,675,474
Ensembl chr 4:164,666,246...164,674,578
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:56,819,826...56,830,662
Ensembl chr19:56,819,791...56,830,660
JBrowse link
G Gabarapl3 GABA type A receptor associated protein like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:98,126,056...98,127,013 JBrowse link
G Gabarapl4 gamma-aminobutyric acid receptor associated protein like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:71,949,837...71,950,435 JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO
IEA
(PMID:23707074)
GO_REF:0000107
RGD
Ensembl
PMID:23707074 GO_REF:0000107 NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:176,907,154...176,916,985
JBrowse link
G Lrba LPS responsive beige-like anchor protein involved_in ISO (PMID:33773106) RGD PMID:33773106 NCBI chr 2:173,919,330...174,500,536
Ensembl chr 2:173,921,747...174,500,527
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:164,243,204...164,244,850
Ensembl chr 3:164,243,093...164,244,850
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
UniProtKB:Q9BXM7 (PMID:19279012), (PMID:28017329)
UniProt
GO_Central
RGD
PMID:19279012 PMID:28017329 GO_REF:0000024 GO_REF:0000033 NCBI chr19:66,571,631...66,582,270
Ensembl chr19:66,574,407...66,584,358
Ensembl chr16:66,574,407...66,584,358
JBrowse link
G Nipsnap1 nipsnap homolog 1 involved_in ISO
IEA
(PMID:30982665)
GO_REF:0000107
GO_REF:0000117
RGD
Ensembl
UniProt
PMID:30982665 GO_REF:0000107 GO_REF:0000117 NCBI chr14:83,957,714...83,981,579
Ensembl chr14:83,957,702...83,981,576
JBrowse link
G Nipsnap2 nipsnap homolog 2 involved_in ISO
IEA
(PMID:30982665)
GO_REF:0000107
GO_REF:0000117
RGD
Ensembl
UniProt
PMID:30982665 GO_REF:0000107 GO_REF:0000117 NCBI chr12:32,542,171...32,580,345
Ensembl chr12:32,547,819...32,580,303
JBrowse link
G Nipsnap3a nipsnap homolog 3A (C. elegans) involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 5:72,409,365...72,420,441
Ensembl chr 5:72,409,402...72,420,077
JBrowse link
G Nipsnap3b nipsnap homolog 3B involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 5:72,446,945...72,465,090
Ensembl chr 5:72,432,957...72,465,544
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
GO_REF:0000107
(PMID:33406421)
Ensembl
RGD
PMID:33406421 GO_REF:0000107 NCBI chr  X:70,811,317...70,856,123
Ensembl chr  X:70,811,319...70,856,123
JBrowse link
G Oma1 OMA1 zinc metallopeptidase acts_upstream_of_or_within ISO (PMID:38340717) RGD PMID:38340717 NCBI chr 5:123,312,038...123,455,540
Ensembl chr 5:123,312,766...123,366,005
JBrowse link
G Phb2 prohibitin 2 involved_in ISO
IEA
ISS
(PMID:28017329)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28017329 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:159,203,948...159,208,561
Ensembl chr 4:159,203,926...159,209,231
JBrowse link
G Pink1 PTEN induced kinase 1 acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
(PMID:38081847)
GO_REF:0000107
UniProtKB:Q8CGY8 (PMID:33406421), (PMID:38081847)
RGD
Ensembl
PMID:33406421 PMID:38081847 PMID:25154397 GO_REF:0000107, RGD:12904014 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:155,813,838...155,825,950
JBrowse link
G Pptc7 protein phosphatase targeting COQ7 acts_upstream_of_or_within ISO (PMID:22505714) RGD PMID:22505714 NCBI chr12:39,910,728...39,949,101
Ensembl chr12:39,910,742...39,949,101
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IDA
IEA
IBA
ISO
PMID:20457763
GO_REF:0000117
GO_REF:0000107
GO_REF:0000033
(PMID:23685073), (PMID:28017329)
MGI:1921624 (PMID:24949970)
UniProt
Ensembl
GO_Central
RGD
PMID:23685073 PMID:24949970 PMID:28017329 PMID:20457763 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:10047224 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:51,210,330...52,430,304
JBrowse link
G Rbx1 ring-box 1 acts_upstream_of_or_within ISO (PMID:22505714) RGD PMID:22505714 NCBI chr 7:114,870,893...114,881,194
Ensembl chr 7:114,870,972...114,881,191
JBrowse link
G Retreg1 reticulophagy regulator 1 acts_upstream_of_or_within ISO (PMID:31446166) RGD PMID:31446166 NCBI chr 2:78,045,435...78,205,316
Ensembl chr 2:78,066,031...78,225,356
JBrowse link
G Rimoc1 RAB7A interacting MON1-CCZ1 complex subunit 1 involved_in ISO
IEA
(PMID:34432599)
GO_REF:0000107
GO_REF:0000002
RGD
Ensembl
InterPro
PMID:34432599 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:54,917,383...54,931,577
Ensembl chr 2:54,917,383...54,931,874
JBrowse link
G Snx30 sorting nexin family member 30 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:79,478,804...79,608,118
Ensembl chr 5:79,478,912...79,607,052
JBrowse link
G Snx7 sorting nexin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:208,528,041...208,612,597
Ensembl chr 2:208,528,049...208,613,075
JBrowse link
G Spata33 spermatogenesis associated 33 involved_in ISO (PMID:33087875) RGD PMID:33087875 NCBI chr19:68,155,033...68,167,415
Ensembl chr19:68,155,326...68,167,262
JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO
IEA
IBA
UniProtKB:Q9JK66 (PMID:20457763)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:20457763 GO_REF:0000033 GO_REF:0000107 NCBI chr10:35,026,598...35,037,750
Ensembl chr10:35,026,598...35,037,750
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of ISO
IEA
MGI:5319187 (PMID:22044588)
GO_REF:0000107
RGD
Ensembl
PMID:22044588 GO_REF:0000107 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:161,613,306...161,632,229
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of ISO
IEA
MGI:1857263 (PMID:22044588)
GO_REF:0000107
RGD
Ensembl
PMID:22044588 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO
IBA
(PMID:21855797)
GO_REF:0000033
RGD
GO_Central
PMID:21855797 GO_REF:0000033 NCBI chr12:51,511,492...51,537,746
Ensembl chr12:51,511,492...51,537,746
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:46,951,038...47,029,844
Ensembl chr10:46,951,038...47,029,844
JBrowse link
G Ulk3 unc-51 like kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:66,888,820...66,895,380
Ensembl chr 8:66,888,788...66,895,379
JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (PMID:24949970) RGD PMID:24949970 NCBI chr10:5,434,725...5,631,246
Ensembl chr10:5,434,725...5,630,619
JBrowse link
G Fbxl4 F-box and leucine-rich repeat protein 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:38992176)
Ensembl
RGD
PMID:38992176 GO_REF:0000107 NCBI chr 5:40,752,513...40,826,154
Ensembl chr 5:40,752,521...40,850,826
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO
IEA
(PMID:19279012)
GO_REF:0000107
RGD
Ensembl
PMID:19279012 GO_REF:0000107 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:155,813,838...155,825,950
JBrowse link
G Pptc7 protein phosphatase targeting COQ7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:38992176)
Ensembl
RGD
PMID:38992176 GO_REF:0000107 NCBI chr12:39,910,728...39,949,101
Ensembl chr12:39,910,742...39,949,101
JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO
IEA
MGI:1921624 (PMID:24949970)
GO_REF:0000107
RGD
Ensembl
PMID:24949970 GO_REF:0000107 NCBI chr 7:1,422,651...1,461,700
Ensembl chr 7:1,426,408...1,448,164
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO
IEA
MGI:5319187 (PMID:22044588)
GO_REF:0000107
RGD
Ensembl
PMID:22044588 GO_REF:0000107 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:161,613,306...161,632,229
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO
IEA
MGI:1857263 (PMID:22044588)
GO_REF:0000107
RGD
Ensembl
PMID:22044588 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299
JBrowse link
G Tspo translocator protein involved_in ISO
IEA
(PMID:25470454)
GO_REF:0000107
RGD
Ensembl
PMID:25470454 GO_REF:0000107 NCBI chr 7:116,600,214...116,610,461
Ensembl chr 7:116,600,210...116,610,460
JBrowse link
G Usp30 ubiquitin specific peptidase 30 IMP RGD PMID:24896179 RGD:13208875 NCBI chr12:48,161,905...48,215,878
Ensembl chr12:48,161,908...48,215,968
JBrowse link
negative regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 involved_in ISO
IEA
(PMID:24709290)
GO_REF:0000107
RGD
Ensembl
PMID:24709290 GO_REF:0000107 NCBI chr 4:117,114,631...117,117,793
Ensembl chr 4:117,114,633...117,117,793
JBrowse link
G Vps13c vacuolar protein sorting 13 homolog C involved_in ISO
IEA
ISS
(PMID:26942284)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
ParkinsonsUK-UCL
PMID:26942284 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:77,359,499...77,533,009
Ensembl chr 8:77,359,504...77,531,871
JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO
IEA
(PMID:30217973)
GO_REF:0000107
RGD
Ensembl
PMID:30217973 GO_REF:0000107 NCBI chr 3:98,156,626...98,345,876
Ensembl chr 3:98,156,652...98,345,872
JBrowse link
G Atg7 autophagy related 7 IMP RGD PMID:37042059 RGD:407532700 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:149,391,390...149,598,319
JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:22922758) RGD PMID:22922758 NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480
JBrowse link
G Dele1 DAP3 binding cell death enhancer 1 involved_in ISO
IEA
(PMID:38340717)
GO_REF:0000107
RGD
Ensembl
PMID:38340717 GO_REF:0000107 NCBI chr18:30,325,369...30,349,285
Ensembl chr18:30,336,308...30,349,938
JBrowse link
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 involved_in ISO
IEA
ISS
(PMID:38340717)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:38340717 GO_REF:0000024 GO_REF:0000107 NCBI chr12:15,824,431...15,858,266
Ensembl chr12:15,825,124...15,858,281
JBrowse link
G Fbxo7 F-box protein 7 involved_in IMP
IEA
ISO
PMID:26310625
GO_REF:0000107
(PMID:26310625)
Ensembl
RGD
PMID:26310625 PMID:26310625 GO_REF:0000107, RGD:11536096 NCBI chr 7:19,696,951...19,725,180
Ensembl chr 7:19,696,961...19,725,180
JBrowse link
G Gdf1 growth differentiation factor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480
JBrowse link
G Htt huntingtin involved_in IEA
ISO
GO_REF:0000107
(PMID:25686248)
Ensembl
RGD
PMID:25686248 GO_REF:0000107 NCBI chr14:80,070,456...80,219,668
Ensembl chr14:80,070,456...80,219,668
JBrowse link
G Irgm immunity-related GTPase M involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:33510463)
(PMID:21102437)
(PMID:32939830)
UniProt
Ensembl
RGD
PMID:21102437 PMID:32939830 PMID:33510463 GO_REF:0000024 GO_REF:0000107 NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:31919280) RGD PMID:31919280 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846
JBrowse link
G Oma1 OMA1 zinc metallopeptidase acts_upstream_of_or_within ISO (PMID:38340717) RGD PMID:38340717 NCBI chr 5:123,312,038...123,455,540
Ensembl chr 5:123,312,766...123,366,005
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IMP
IEA
ISO
GO_REF:0000107
(PMID:26310625)
Ensembl
RGD
PMID:26310625 PMID:28608965 GO_REF:0000107, RGD:13432560 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:51,210,330...52,430,304
JBrowse link
G Slc25a4 solute carrier family 25 member 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:31618756)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31618756 GO_REF:0000024 GO_REF:0000107 NCBI chr16:52,805,521...52,809,316
Ensembl chr16:52,805,523...52,811,700
JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:31618756)
UniProt
RGD
PMID:31618756 GO_REF:0000024 NCBI chr  X:120,897,616...120,900,683
Ensembl chr  X:120,897,563...120,900,688
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IMP PMID:29934347 UniProt PMID:29934347 RGD:405650300 NCBI chr10:15,355,278...15,357,559
Ensembl chr10:15,355,279...15,357,559
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A involved_in ISO
IEA
(PMID:23685073)
GO_REF:0000107
RGD
Ensembl
PMID:23685073 GO_REF:0000107 NCBI chr  X:120,979,993...120,990,773
Ensembl chr  X:120,978,790...120,990,750
JBrowse link
G Vps13d vacuolar protein sorting 13 homolog D involved_in ISO
IEA
(PMID:29307555)
GO_REF:0000107
RGD
Ensembl
PMID:29307555 GO_REF:0000107 NCBI chr 5:162,113,732...162,339,121
Ensembl chr 5:162,113,732...162,339,099
JBrowse link
positive regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) RGD PMID:24005319 NCBI chr 5:150,022,960...150,026,677
Ensembl chr 5:150,022,960...150,026,677
JBrowse link
G Cdc37 cell division cycle 37, HSP90 cochaperone involved_in ISO (PMID:21855797) RGD PMID:21855797 NCBI chr 8:27,954,292...27,966,935
Ensembl chr 8:27,948,016...27,983,931
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO
IEA
(PMID:23707074)
GO_REF:0000107
RGD
Ensembl
PMID:23707074 GO_REF:0000107 NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:176,907,154...176,916,985
JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO
IEA
UniProtKB:Q9JK66 (PMID:20457763)
GO_REF:0000107
RGD
Ensembl
PMID:20457763 GO_REF:0000107 NCBI chr  X:17,222,538...17,244,373
Ensembl chr  X:17,222,856...17,244,370
JBrowse link
G Hk2 hexokinase 2 involved_in ISO
IEA
(PMID:23962723)
GO_REF:0000107
RGD
Ensembl
PMID:23962723 GO_REF:0000107 NCBI chr 4:116,792,258...116,841,275
Ensembl chr 4:116,792,258...116,841,275
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO (PMID:30217973) RGD PMID:30217973 NCBI chr  X:24,350,708...24,480,798
Ensembl chr  X:24,353,217...24,480,798
JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO
IEA
(PMID:24709290)
GO_REF:0000107
RGD
Ensembl
PMID:24709290 GO_REF:0000107 NCBI chr 5:155,936,112...155,945,163
Ensembl chr 5:155,936,111...155,945,163
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO
IEA
(PMID:20871098)
GO_REF:0000107
RGD
Ensembl
PMID:20871098 GO_REF:0000107 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:155,813,838...155,825,950
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA
(PMID:20457763), (PMID:20871098), (PMID:23212910)
GO_REF:0000107
RGD
Ensembl
PMID:20457763 PMID:20871098 PMID:23212910 GO_REF:0000107 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:51,210,330...52,430,304
JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 involved_in ISO (PMID:24270810) RGD PMID:24270810 NCBI chr 4:12,197,503...12,204,344
Ensembl chr 4:12,197,491...12,204,343
JBrowse link
G Vdac1 voltage-dependent anion channel 1 involved_in ISO
IEA
(PMID:32047033)
GO_REF:0000107
RGD
Ensembl
PMID:32047033 GO_REF:0000107 NCBI chr10:37,029,377...37,060,542
Ensembl chr10:37,023,145...37,060,541
JBrowse link
regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:31172217 RGD:329403053 NCBI chr13:80,280,595...80,366,939
Ensembl chr13:80,284,295...80,366,926
JBrowse link
G Bnip3l BCL2 interacting protein 3 like involved_in ISO
IEA
UniProtKB:Q9Z2F7 (PMID:20200478)
GO_REF:0000107
RGD
Ensembl
PMID:20200478 GO_REF:0000107 NCBI chr15:45,350,081...45,373,213
Ensembl chr15:45,334,537...45,373,282
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr19:9,562,340...9,602,136
Ensembl chr19:9,562,321...9,602,136
JBrowse link
G Cttn cortactin involved_in IEA
ISO
GO_REF:0000107
(PMID:20457763)
Ensembl
RGD
PMID:20457763 GO_REF:0000107 NCBI chr 1:209,029,048...209,064,577
Ensembl chr 1:209,029,048...209,058,211
JBrowse link
G Dnm1l dynamin 1-like involved_in ISO UniProtKB:Q9BXM7 (PMID:19279012) RGD PMID:19279012 NCBI chr11:98,084,049...98,135,663
Ensembl chr11:98,085,397...98,137,420
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO
IEA
(PMID:24912190)
GO_REF:0000107
RGD
Ensembl
PMID:24912190 GO_REF:0000107 NCBI chr 2:172,447,738...172,609,591
Ensembl chr 2:172,447,738...172,609,591
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in ISO
IEA
(PMID:28381481), (PMID:31908024)
GO_REF:0000107
RGD
Ensembl
PMID:28381481 PMID:31908024 GO_REF:0000107 NCBI chr16:18,929,581...18,936,621
Ensembl chr16:18,929,582...18,936,543
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:73,606,860...73,618,612
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:24912190) RGD PMID:24912190 NCBI chr 1:89,943,669...89,953,514
Ensembl chr 1:89,943,669...89,953,593
JBrowse link
G Parl presenilin associated, rhomboid-like involved_in ISO (PMID:21355049) RGD PMID:21355049 NCBI chr11:94,097,559...94,124,915
Ensembl chr11:94,097,934...94,148,287
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO
IEA
(PMID:24912190)
GO_REF:0000107
RGD
Ensembl
PMID:24912190 GO_REF:0000107 NCBI chr10:45,507,152...45,529,164
Ensembl chr10:45,507,152...45,529,164
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 7:115,542,774...115,600,945
Ensembl chr 7:115,543,290...115,600,943
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr10:103,995,970...104,027,492
Ensembl chr10:103,995,970...104,023,450
JBrowse link
G Vdac1 voltage-dependent anion channel 1 involved_in ISO
IEA
(PMID:25470454)
GO_REF:0000107
RGD
Ensembl
PMID:25470454 GO_REF:0000107 NCBI chr10:37,029,377...37,060,542
Ensembl chr10:37,023,145...37,060,541
JBrowse link
type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 involved_in ISO
IEA
UniProtKB:Q9JK66|UniProtKB:Q9Z2V5 (PMID:20457763)
GO_REF:0000107
RGD
Ensembl
PMID:20457763 GO_REF:0000107 NCBI chr  X:17,222,538...17,244,373
Ensembl chr  X:17,222,856...17,244,370
JBrowse link
G Mfn2 mitofusin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:23620051)
Ensembl
RGD
PMID:23620051 GO_REF:0000107 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:163,587,463...163,618,495
JBrowse link
G Optn optineurin involved_in ISO
IEA
(PMID:25294927)
GO_REF:0000107
RGD
Ensembl
PMID:25294927 GO_REF:0000107 NCBI chr17:78,118,847...78,169,543
Ensembl chr17:78,118,866...78,169,543
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA
(PMID:19029340)
GO_REF:0000107
RGD
Ensembl
PMID:19029340 GO_REF:0000107 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:51,210,330...52,430,304
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22020285) RGD PMID:22020285 NCBI chr12:14,748,717...14,840,273
Ensembl chr12:14,749,043...14,840,273
JBrowse link
G Timm23 translocase of inner mitochondrial membrane 23 involved_in ISS
ISO
GO_REF:0000024
(PMID:37160114)
UniProt
RGD
PMID:37160114 GO_REF:0000024 NCBI chr16:7,416,590...7,442,681
Ensembl chr16:7,416,597...7,442,658
Ensembl chr 3:7,416,597...7,442,658
Ensembl chr 6:7,416,597...7,442,658
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      process utilizing autophagic mechanism 604
        autophagy 604
          autophagy of mitochondrion 117
            mitophagy 99
              negative regulation of mitophagy + 11
              positive regulation of mitophagy + 27
              regulation of mitophagy + 50
              type 1 mitophagy 0
              type 2 mitophagy + 17
Path 2
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      metabolic process 12252
        catabolic process 3064
          autophagy 604
            macroautophagy 366
              mitophagy 99
                negative regulation of mitophagy + 11
                positive regulation of mitophagy + 27
                regulation of mitophagy + 50
                type 1 mitophagy 0
                type 2 mitophagy + 17
paths to the root