Gene: Atg4d (autophagy related 4D, cysteine peptidase) Rattus norvegicus
Symbol: Atg4d
Name: autophagy related 4D, cysteine peptidase
Description: ENCODES a protein that exhibits cysteine-type peptidase activity (inferred); INVOLVED IN autophagy (inferred); protein transport (inferred); proteolysis (inferred); PARTICIPATES IN autophagy pathway; FOUND IN cytoplasm (inferred); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; oxaliplatin
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ATG4 autophagy related 4 homolog D; ATG4 autophagy related 4 homolog D (S. cerevisiae); autophagy-related 4D; autophagy-related 4D (S. cerevisiae); cysteine protease ATG4D; LOC686505; similar to APG4-D protein
Homo sapiens (human) : ATG4D (autophagy related 4D cysteine peptidase)  HGNC  Alliance
Mus musculus (house mouse) : Atg4d (autophagy related 4D, cysteine peptidase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg4d (autophagy related 4D cysteine peptidase)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG4D (autophagy related 4D cysteine peptidase)
Canis lupus familiaris (dog) : ATG4D (autophagy related 4D cysteine peptidase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg4d (autophagy related 4D cysteine peptidase)
Sus scrofa (pig) : ATG4D (autophagy related 4D cysteine peptidase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0822,291,445 - 22,301,331 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0822,344,081 - 22,353,967 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera821,199,310 - 21,208,865 (+)NCBICelera
Cytogenetic Map8q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
More on Atg4d
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1596392
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE