Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pik3c2b (phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta) Rattus norvegicus
Analyze
Symbol: Pik3c2b
Name: phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
Description: Predicted to have 1-phosphatidylinositol-3-kinase activity; 1-phosphatidylinositol-4-phosphate 3-kinase activity; and lipid kinase activity. Predicted to be involved in several processes, including autophagosome organization; intracellular signal transduction; and phosphatidylinositol metabolic process. Predicted to localize to several cellular components, including endocytic vesicle; nucleoplasm; and phosphatidylinositol 3-kinase complex. Orthologous to human PIK3C2B (phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta); PARTICIPATES IN inositol phosphate metabolic pathway; phosphatidylinositol 3-kinase signaling pathway; INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC289021; nuclear cap binding protein subunit 2; phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta; phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing subunit beta; phosphoinositide-3-kinase, class 2 beta polypeptide; phosphoinositide-3-kinase, class 2, beta polypeptide
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01349,848,939 - 49,909,404 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1349,850,189 - 49,911,202 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01354,919,438 - 54,977,791 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41345,954,337 - 46,013,206 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11345,987,757 - 46,027,587 (+)NCBI
Celera1344,829,361 - 44,887,236 (+)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pik3c2b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306541
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.