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Gene: Stbd1 (starch binding domain 1) Rattus norvegicus
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Symbol: Stbd1
Name: starch binding domain 1
Description: Predicted to have enzyme binding activity and glycogen binding activity. Predicted to be involved in glycophagy and intracellular transport. Predicted to localize to several cellular components, including the T-tubule; endoplasmic reticulum; and perinuclear region of cytoplasm. Orthologous to human STBD1 (starch binding domain 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amiodarone; amitriptyline.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: genethonin-1; glycophagy cargo receptor stbd1; LOC305234; MGC108973; RGD1311800; similar to genethonin 1; starch-binding domain-containing protein 1
Orthologs:
Homo sapiens (human) : STBD1 (starch binding domain 1)  HGNC  Alliance
Mus musculus (house mouse) : Stbd1 (starch binding domain 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Stbd1 (starch binding domain 1)
Pan paniscus (bonobo/pygmy chimpanzee) : STBD1 (starch binding domain 1)
Canis lupus familiaris (dog) : STBD1 (starch binding domain 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stbd1 (starch binding domain 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01416,976,355 - 16,979,760 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1416,976,356 - 16,979,760 (-)Ensembl
Rnor_5.01416,889,874 - 16,893,279 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41417,031,752 - 17,035,157 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11417,031,752 - 17,035,157 (-)NCBI
Celera1414,865,243 - 14,868,648 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Stbd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311800
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.