ONTOLOGY REPORT - ANNOTATIONS
Term: mitophagy
Accession: GO:0000423
browse the term
Definition: The selective autophagy process in which a mitochondrion is degraded by macroautophagy.
Comment: Note that this terms refers to the macroautophagy process and is named by common usage. Be aware that there are a separate micromitophagy and mitophagy by induced vacuole formation processes.
Synonyms: exact_synonym: macromitophagy
xref: Wikipedia:Mitophagy
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Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO IBA
UniProtKB:O60260|UniProtKB:Q99MQ3 (PMID:21753002), (PMID:25215947) GO_REF:0000033
RGD GO_Central
PMID:21753002 PMID:25215947
GO_REF:0000033
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
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Arfip2
ADP-ribosylation factor interacting protein 2
involved_in
ISO ISS
(PMID:33773106) GO_REF:0000024
RGD UniProt
PMID:33773106
GO_REF:0000024
NCBI chr 1:159,974,255...159,980,398
Ensembl chr 1:159,974,201...159,980,336
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Atg13
autophagy related 13
involved_in
ISO IBA
(MGI:5607224|PMID:21855797) GO_REF:0000033
RGD GO_Central
PMID:21855797
GO_REF:0000033 MGI:5607224
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
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Atg14
autophagy related 14
involved_in
ISO IBA
(PMID:23878393) GO_REF:0000033
RGD GO_Central
PMID:23878393
GO_REF:0000033
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
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Atg4a
autophagy related 4A, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:104,665,345...104,765,271
Ensembl chr X:104,665,345...104,765,268
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Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO IBA IEA
(PMID:33773106) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:33773106
GO_REF:0000033 GO_REF:0000107
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
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Atg4c
autophagy related 4C, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:113,867,218...113,935,534
Ensembl chr 5:113,867,092...113,934,830
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Atg4d
autophagy related 4D, cysteine peptidase
involved_in
ISO IBA
(PMID:33773106) GO_REF:0000033
RGD GO_Central
PMID:33773106
GO_REF:0000033
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
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Atg5
autophagy related 5
involved_in
IEA ISO
GO_REF:0000107 (MGI:3796473|PMID:18281291)
Ensembl RGD
PMID:18281291
GO_REF:0000107 MGI:3796473
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Atg7
autophagy related 7
involved_in
IEA ISO
GO_REF:0000107 (MGI:4420830|PMID:20080761) UniProtKB:Q9BXM7 (PMID:19279012)
Ensembl RGD
PMID:19279012 PMID:20080761
GO_REF:0000107 MGI:4420830
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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Becn1
beclin 1
involved_in
ISO IBA
(PMID:23878393), (PMID:25215947) GO_REF:0000033 (MGI:3796473|PMID:18281291)
RGD GO_Central
PMID:18281291 PMID:23878393 PMID:25215947
GO_REF:0000033 MGI:3796473
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
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Becn2
beclin 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:87,842,980...87,892,410
Ensembl chr13:87,844,531...87,845,787
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Ctsk
cathepsin K
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr 2:183,058,586...183,069,551
Ensembl chr 2:183,058,569...183,069,550
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Fundc1
FUN14 domain containing 1
involved_in
ISO
UniProtKB:P09936 (PMID:34244144)
RGD
PMID:34244144
NCBI chr X:5,083,635...5,100,293
Ensembl chr X:5,083,617...5,100,284
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Gba1
glucosylceramidase beta 1
acts_upstream_of_or_within
ISO
(PMID:23707074)
RGD
PMID:23707074
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
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Lrba
LPS responsive beige-like anchor protein
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 2:171,623,668...172,202,576
Ensembl chr 2:171,621,507...172,202,724
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Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
ISS ISO
GO_REF:0000024 UniProtKB:Q9BXM7 (PMID:19279012), (PMID:28017329)
UniProt RGD
PMID:19279012 PMID:28017329
GO_REF:0000024
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
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Ogt
O-linked N-acetylglucosamine (GlcNAc) transferase
involved_in
ISO IEA
(MGI:6694822|PMID:33406421) GO_REF:0000107
RGD Ensembl
PMID:33406421
GO_REF:0000107 MGI:6694822
NCBI chr X:66,771,278...66,816,148
Ensembl chr X:66,771,349...66,816,146
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Phb2
prohibitin 2
involved_in
ISO IEA ISS
(PMID:28017329) GO_REF:0000107 (MGI:6436385|PMID:28017329) GO_REF:0000024
RGD Ensembl UniProt
PMID:28017329
GO_REF:0000024 GO_REF:0000107 MGI:6436385
NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
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Pink1
PTEN induced kinase 1
involved_in
ISO
UniProtKB:Q8CGY8 (PMID:33406421)
RGD
PMID:33406421
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in acts_upstream_of_or_within
ISO IDA IEA
(PMID:28017329) MGI:1921624 (PMID:24949970) PMID:20457763 GO_REF:0000107
RGD Ensembl
PMID:24949970 PMID:28017329 PMID:20457763
GO_REF:0000107, RGD:10047224
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Retreg1
reticulophagy regulator 1
acts_upstream_of_or_within
ISO
(PMID:31446166)
RGD
PMID:31446166
NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
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Rimoc1
RAB7A interacting MON1-CCZ1 complex subunit 1
involved_in
ISO
(PMID:34432599)
RGD
PMID:34432599
NCBI chr 2:53,189,787...53,203,981
Ensembl chr 2:53,189,790...53,203,821
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Spata33
spermatogenesis associated 33
involved_in
ISO
(MGI:6763857|PMID:33087875)
RGD
PMID:33087875
MGI:6763857
NCBI chr19:51,246,514...51,258,894
Ensembl chr19:51,246,514...51,258,894
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Sqstm1
sequestosome 1
involved_in
ISO IBA IEA
UniProtKB:Q9JK66 (PMID:20457763) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:20457763
GO_REF:0000033 GO_REF:0000118
NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
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Tafazzin
tafazzin, phospholipid-lysophospholipid transacylase
involved_in
ISO
(PMID:33096711) (MGI:6450300|PMID:25919711)
RGD
PMID:25919711 PMID:33096711
MGI:6450300
NCBI chr X:152,065,539...152,076,178
Ensembl chr X:152,065,609...152,074,001
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Tigar
TP53 induced glycolysis regulatory phosphatase
acts_upstream_of
ISO
MGI:5319187 (PMID:22044588)
RGD
PMID:22044588
NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029
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Tp53
tumor protein p53
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1857263 (PMID:22044588)
Ensembl RGD
PMID:22044588
GO_REF:0000107
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Ulk1
unc-51 like autophagy activating kinase 1
involved_in
ISO
(MGI:5607224|PMID:21855797)
RGD
PMID:21855797
MGI:5607224
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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Clec16a
C-type lectin domain containing 16A
acts_upstream_of_or_within
ISO
MGI:5648633 (PMID:24949970)
RGD
PMID:24949970
NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578
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Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:19279012)
RGD
PMID:19279012
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
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Rnf41
ring finger protein 41
acts_upstream_of_or_within
ISO
MGI:1921624 (PMID:24949970)
RGD
PMID:24949970
NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511
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Tigar
TP53 induced glycolysis regulatory phosphatase
acts_upstream_of_or_within
ISO
MGI:5319187 (PMID:22044588)
RGD
PMID:22044588
NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029
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Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857263 (PMID:22044588)
Ensembl RGD
PMID:22044588
GO_REF:0000107
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Tspo
translocator protein
involved_in
ISO
(MGI:5689082|PMID:25470454)
RGD
PMID:25470454
MGI:5689082
NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
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Usp30
ubiquitin specific peptidase 30
IMP
RGD
PMID:24896179
RGD:13208875
NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616
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Htra2
HtrA serine peptidase 2
involved_in
ISO
(MGI:5581539|PMID:24709290)
RGD
PMID:24709290
MGI:5581539
NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095
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Vps13c
vacuolar protein sorting 13 homolog C
involved_in
ISO ISS
(PMID:26942284) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:26942284
GO_REF:0000024
NCBI chr 8:68,478,366...68,651,893
Ensembl chr 8:68,478,395...68,651,895
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Hdac6
histone deacetylase 6
involved_in
ISO
UniProtKB:Q9JK66|UniProtKB:Q9Z2V5 (PMID:20457763)
RGD
PMID:20457763
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
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Mfn2
mitofusin 2
involved_in
ISO IEA
(MGI:5498413|PMID:23620051) GO_REF:0000107
RGD Ensembl
PMID:23620051
GO_REF:0000107 MGI:5498413
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
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Optn
optineurin
involved_in
ISO IEA
(PMID:25294927) GO_REF:0000107
RGD Ensembl
PMID:25294927
GO_REF:0000107
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO IEA
(PMID:19029340) GO_REF:0000107
RGD Ensembl
PMID:19029340
GO_REF:0000107
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
ISO
(MGI:5298125|PMID:22020285)
RGD
PMID:22020285
MGI:5298125
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
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Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO
(PMID:30217973)
RGD
PMID:30217973
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
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Cers1
ceramide synthase 1
involved_in
ISO
(PMID:22922758)
RGD
PMID:22922758
NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
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Fbxo7
F-box protein 7
involved_in
IMP ISO
PMID:26310625 (PMID:26310625)
RGD
PMID:26310625 PMID:26310625
RGD:11536096
NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
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Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
IEA ISO
GO_REF:0000107 (MGI:3796473|PMID:18281291)
Ensembl RGD
PMID:18281291
GO_REF:0000107 MGI:3796473
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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Htt
huntingtin
involved_in
IEA ISO
GO_REF:0000107 (PMID:25686248)
Ensembl RGD
PMID:25686248
GO_REF:0000107
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
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Irgm
immunity-related GTPase M
involved_in
ISS ISO
GO_REF:0000024 (MGI:6705154|PMID:33510463) (PMID:21102437) (PMID:32939830)
UniProt RGD
PMID:21102437 PMID:32939830 PMID:33510463
GO_REF:0000024 MGI:6705154
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
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Nod2
nucleotide-binding oligomerization domain containing 2
involved_in
ISO
(MGI:6388731|PMID:31919280)
RGD
PMID:31919280
MGI:6388731
NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
IMP IEA ISO
GO_REF:0000107 (PMID:26310625)
Ensembl RGD
PMID:26310625 PMID:28608965
GO_REF:0000107, RGD:13432560
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Slc25a4
solute carrier family 25 member 4
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:6407583|PMID:31618756)
UniProt Ensembl RGD
PMID:31618756
GO_REF:0000024 GO_REF:0000107 MGI:6407583
NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
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Slc25a5
solute carrier family 25 member 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:6407583|PMID:31618756)
UniProt RGD
PMID:31618756
GO_REF:0000024 MGI:6407583
NCBI chr X:116,031,896...116,034,963
Ensembl chr X:116,031,803...116,034,967
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Vps13d
vacuolar protein sorting 13 homolog D
involved_in
ISO
(PMID:29307555)
RGD
PMID:29307555
NCBI chr 5:156,830,509...157,055,895
Ensembl chr 5:156,830,512...157,055,891
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Cdc37
cell division cycle 37, HSP90 cochaperone
involved_in
ISO IEA
(MGI:5607224|PMID:21855797) GO_REF:0000107
RGD Ensembl
PMID:21855797
GO_REF:0000107 MGI:5607224
NCBI chr 8:19,677,400...19,690,761
Ensembl chr 8:19,671,938...19,690,809
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Hdac6
histone deacetylase 6
involved_in
ISO
UniProtKB:Q9JK66 (MGI:5616310|PMID:20457763)
RGD
PMID:20457763
MGI:5616310
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
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Huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:30217973)
RGD
PMID:30217973
NCBI chr X:20,873,795...21,001,378
Ensembl chr X:20,873,795...21,001,262
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Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:20871098)
RGD
PMID:20871098
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO
(PMID:20457763), (PMID:20871098), (PMID:23212910)
RGD
PMID:20457763 PMID:20871098 PMID:23212910
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Tomm7
translocase of outer mitochondrial membrane 7
involved_in
ISO
(PMID:24270810)
RGD
PMID:24270810
NCBI chr 4:11,305,122...11,311,963
Ensembl chr 4:11,305,110...11,311,962
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Vdac1
voltage-dependent anion channel 1
involved_in
ISO
(PMID:32047033)
RGD
PMID:32047033
NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
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Adcy10
adenylate cyclase 10
IMP
RGD
PMID:31172217
RGD:329403053
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
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Bnip3l
BCL2 interacting protein 3 like
involved_in
ISO
UniProtKB:Q9Z2F7 (MGI:5616312|PMID:20200478)
RGD
PMID:20200478
MGI:5616312
NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
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Csnk2a2
casein kinase 2 alpha 2
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
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Cttn
cortactin
involved_in
IEA ISO
GO_REF:0000107 (MGI:5616310|PMID:20457763)
Ensembl RGD
PMID:20457763
GO_REF:0000107 MGI:5616310
NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
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Dnm1l
dynamin 1-like
involved_in
ISO
UniProtKB:Q9BXM7 (PMID:19279012)
RGD
PMID:19279012
NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
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Fbxw7
F-box and WD repeat domain containing 7
involved_in
ISO
(PMID:24912190)
RGD
PMID:24912190
NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941
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Fkbp8
FKBP prolyl isomerase 8
involved_in
IEA ISO
GO_REF:0000107 (PMID:28381481), (PMID:31908024)
Ensembl RGD
PMID:28381481 PMID:31908024
GO_REF:0000107
NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
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Fzd5
frizzled class receptor 5
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
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Gsk3a
glycogen synthase kinase 3 alpha
involved_in
IEA ISO
GO_REF:0000107 (PMID:24912190)
Ensembl RGD
PMID:24912190
GO_REF:0000107
NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
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Parl
presenilin associated, rhomboid-like
involved_in
ISO
(MGI:5619462|PMID:21355049)
RGD
PMID:21355049
MGI:5619462
NCBI chr11:80,594,059...80,620,506
Ensembl chr11:80,593,192...80,620,506
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Srebf1
sterol regulatory element binding transcription factor 1
involved_in
ISO
(PMID:24912190)
RGD
PMID:24912190
NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
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Srebf2
sterol regulatory element binding transcription factor 2
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
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Usp36
ubiquitin specific peptidase 36
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
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Vdac1
voltage-dependent anion channel 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5689082|PMID:25470454)
Ensembl RGD
PMID:25470454
GO_REF:0000107 MGI:5689082
NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
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