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Gene: Clec16a (C-type lectin domain containing 16A) Rattus norvegicus
Symbol: Clec16a
Name: C-type lectin domain containing 16A
Description: Predicted to be involved in several processes, including negative regulation of proteasomal ubiquitin-dependent protein catabolic process; positive regulation of TORC1 signaling; and regulation of macroautophagy. Predicted to localize to the Golgi apparatus; cytosol; and endolysosome membrane. Human ortholog(s) of this gene implicated in Addison's disease; multiple sclerosis; rheumatoid arthritis; and type 1 diabetes mellitus. Orthologous to human CLEC16A (C-type lectin domain containing 16A); INTERACTS WITH bisphenol A; oxaliplatin; topotecan.
Type: protein-coding
RefSeq Status: MODEL
Also known as: C-type lectin domain family 16, member A; LOC287044; RGD1305773; similar to CG12753-PA
Homo sapiens (human) : CLEC16A (C-type lectin domain containing 16A)  HGNC  Alliance
Mus musculus (house mouse) : Clec16a (C-type lectin domain family 16, member A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clec16a (C-type lectin domain containing 16A)
Pan paniscus (bonobo/pygmy chimpanzee) : CLEC16A (C-type lectin domain containing 16A)
Canis lupus familiaris (dog) : CLEC16A (C-type lectin domain containing 16A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clec16a (C-type lectin domain containing 16A)
Sus scrofa (pig) : CLEC16A (C-type lectin domain containing 16A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0105,002,196 - 5,196,914 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl105,009,826 - 5,196,892 (-)Ensembl
Rnor_5.0103,827,156 - 4,020,226 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4104,870,719 - 5,069,691 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1104,873,502 - 5,072,213 (-)NCBI
Celera103,948,821 - 4,141,759 (-)NCBICelera
Cytogenetic Map10q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Clec16a
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305773
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.