Gene: Supt5h (SPT5 homolog, DSIF elongation factor subunit) Rattus norvegicus
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Symbol: Supt5h
Name: SPT5 homolog, DSIF elongation factor subunit
Description: ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II; negative regulation of DNA-templated transcription, elongation (ortholog); negative regulation of mRNA polyadenylation (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; FOUND IN DSIF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: suppressor of Ty 5 homolog; suppressor of Ty 5 homolog (S. cerevisiae); transcription elongation factor SPT5
Orthologs:
Homo sapiens (human) : SUPT5H (SPT5 homolog, DSIF elongation factor subunit)  HGNC  Alliance
Mus musculus (house mouse) : Supt5 (suppressor of Ty 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Supt5h (SPT5 homolog, DSIF elongation factor subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : SUPT5H (SPT5 homolog, DSIF elongation factor subunit)
Canis lupus familiaris (dog) : SUPT5H (SPT5 homolog, DSIF elongation factor subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Supt5h (SPT5 homolog, DSIF elongation factor subunit)
Sus scrofa (pig) : SUPT5H (SPT5 homolog, DSIF elongation factor subunit)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0185,437,780 - 85,466,854 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0186,651,790 - 86,680,457 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4183,433,056 - 83,434,029 (-)NCBIRGSC3.4rn4RGSC3.4
Celera177,985,530 - 78,013,882 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Supt5h
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563807
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-02-05
Status: ACTIVE