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Gene: Atg16l2 (autophagy related 16-like 2) Rattus norvegicus
Symbol: Atg16l2
Name: autophagy related 16-like 2
Description: Predicted to be involved in autophagosome assembly and negative stranded viral RNA replication. Predicted to localize to autophagosome membrane and nucleoplasm. Orthologous to human ATG16L2 (autophagy related 16 like 2); PARTICIPATES IN autophagy pathway; INTERACTS WITH 1-naphthyl isothiocyanate; acetamide; bisphenol A.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: ATG16 autophagy related 16-like 2; ATG16 autophagy related 16-like 2 (S. cerevisiae); autophagy related 16-like 2 (S. cerevisiae); autophagy-related protein 16-2; LOC308865; RGD1311400; similar to APG16L beta isoform
Homo sapiens (human) : ATG16L2 (autophagy related 16 like 2)  HGNC  Alliance
Mus musculus (house mouse) : Atg16l2 (autophagy related 16-like 2 (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg16l2 (autophagy related 16 like 2)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG16L2 (autophagy related 16 like 2)
Canis lupus familiaris (dog) : ATG16L2 (autophagy related 16 like 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg16l2 (autophagy related 16 like 2)
Sus scrofa (pig) : ATG16L2 (autophagy related 16 like 2)
Chlorocebus sabaeus (African green monkey) : ATG16L2 (autophagy related 16 like 2)
Heterocephalus glaber (naked mole-rat) : Atg16l2 (autophagy related 16 like 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01166,401,271 - 166,415,078 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1166,401,271 - 166,413,564 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01172,590,904 - 172,604,849 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41158,787,778 - 158,800,330 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11158,867,019 - 158,879,347 (-)NCBI
Celera1153,773,419 - 153,785,720 (-)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Atg16l2
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311400
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.