Armc3 (armadillo repeat containing 3)

Gene: Armc3 (armadillo repeat containing 3) Rattus norvegicus

Analyze

Symbol:

Armc3

Name:

armadillo repeat containing 3

RGD ID:

2319961

Description:

Predicted to be involved in flagellated sperm motility; ribophagy; and spermatid development. Orthologous to human ARMC3 (armadillo repeat containing 3); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

armadillo repeat-containing protein 3; Armc3 protein-like; LOC100361506

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ARMC3 (armadillo repeat containing 3)	RGD	RGD
Mus musculus (house mouse):	Armc3 (armadillo repeat containing 3)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Armc3 (armadillo repeat containing 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ARMC3 (armadillo repeat containing 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ARMC3 (armadillo repeat containing 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Armc3 (armadillo repeat containing 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ARMC3 (armadillo repeat containing 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ARMC3 (armadillo repeat containing 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Armc3 (armadillo repeat containing 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ARMC3 (armadillo repeat containing 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Armc3 (armadillo repeat containing 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	armc3 (armadillo repeat containing 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG13326	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	armc3	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	86,722,436 - 86,825,899 (+)	NCBI		GRCr8
mRatBN7.2	17	81,814,087 - 81,917,534 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	81,832,518 - 81,917,531 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	85,297,704 - 85,382,538 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	89,133,120 - 89,217,975 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	83,149,878 - 83,234,738 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	85,895,841 - 86,009,403 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	85,914,410 - 86,009,396 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	87,610,808 - 87,726,061 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	93,278,359 - 93,361,623 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	17	81,103,766 - 81,187,813 (+)	NCBI		Celera
Cytogenetic Map	17	q12.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Familial Persistent Stuttering 4 (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chloroprene (ISO)

crocidolite asbestos (ISO)

fulvestrant (ISO)

malathion (ISO)

ozone (ISO)

pirinixic acid (ISO)

propanal (ISO)

sodium arsenite (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

flagellated sperm motility (ISO)

ribophagy (ISO)

spermatid development (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15632090	PMID:19056867

Genomics

Comparative Map Data

Armc3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	86,722,436 - 86,825,899 (+)	NCBI		GRCr8
mRatBN7.2	17	81,814,087 - 81,917,534 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	81,832,518 - 81,917,531 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	85,297,704 - 85,382,538 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	89,133,120 - 89,217,975 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	83,149,878 - 83,234,738 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	85,895,841 - 86,009,403 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	85,914,410 - 86,009,396 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	87,610,808 - 87,726,061 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	93,278,359 - 93,361,623 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	17	81,103,766 - 81,187,813 (+)	NCBI		Celera
Cytogenetic Map	17	q12.3	NCBI

ARMC3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	22,928,053 - 23,038,523 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	22,928,024 - 23,038,523 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	23,216,982 - 23,327,452 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	23,256,966 - 23,366,520 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	23,256,965 - 23,366,520	NCBI
Celera	10	22,904,614 - 23,014,160 (+)	NCBI		Celera
Cytogenetic Map	10	p12.2	NCBI
HuRef	10	22,877,824 - 22,986,594 (+)	NCBI		HuRef
CHM1_1	10	23,217,435 - 23,327,017 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	22,947,064 - 23,057,478 (+)	NCBI		T2T-CHM13v2.0

Armc3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	19,203,676 - 19,315,054 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	19,204,113 - 19,315,052 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	19,198,865 - 19,310,243 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	19,199,302 - 19,310,241 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	19,120,745 - 19,231,861 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	19,116,872 - 19,227,988 (+)	NCBI		MGSCv36	mm8
Celera	2	19,104,793 - 19,208,375 (+)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	13.2	NCBI

Armc3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	5,947,940 - 6,051,038 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	5,949,180 - 6,050,690 (-)	NCBI	ChiLan1.0	ChiLan1.0

ARMC3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	35,527,861 - 35,721,296 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	35,533,182 - 35,724,736 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	23,085,591 - 23,196,943 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	23,460,342 - 23,570,908 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	23,460,348 - 23,570,908 (+)	Ensembl	panpan1.1		panPan2

ARMC3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	10,201,347 - 10,302,951 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	10,202,329 - 10,302,733 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	8,895,514 - 8,996,035 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	8,400,242 - 8,500,787 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	8,400,246 - 8,500,665 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	7,765,696 - 7,866,137 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	7,848,514 - 7,949,051 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	8,016,960 - 8,117,519 (-)	NCBI		UU_Cfam_GSD_1.0

Armc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	22,746,484 - 22,844,963 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936520	5,116,628 - 5,211,163 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936520	5,116,628 - 5,211,163 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARMC3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	51,959,610 - 52,049,425 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	51,959,571 - 52,050,071 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	57,615,066 - 57,704,928 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARMC3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	22,683,911 - 22,800,051 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	22,685,028 - 22,800,926 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	28,442,972 - 28,564,471 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Armc3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624796	5,678,701 - 5,778,443 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624796	5,679,159 - 5,781,173 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Armc3
761 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	249
Count of miRNA genes:	169
Interacting mature miRNAs:	187
Transcripts:	ENSRNOT00000022475, ENSRNOT00000065463, ENSRNOT00000075188
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2301412	Kidm40	Kidney mass QTL 40		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	37479847	82479847	Rat
2317054	Aia12	Adjuvant induced arthritis QTL 12	4.24		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	17	38281509	83281509	Rat
2317060	Aia26	Adjuvant induced arthritis QTL 26	3.22		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	17	38281509	83281509	Rat
1358295	Aocep1	Aortic cell protein QTL 1	6.1	0.00000071	thoracic aorta cellular protein amount (VT:0010598)	aortic cell percentage	17	40990005	85990005	Rat
7411575	Bw140	Body weight QTL 140	30.2	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	17	48560935	86533673	Rat
8694181	Bw151	Body weight QTL 151	4.36	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	17	48560935	86533673	Rat
2317038	Ginf3	Gastrointestinal inflammation QTL 3	2.89	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	17	49920154	86533673	Rat
2303580	Gluco49	Glucose level QTL 49	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	17	50040271	86533673	Rat
4889894	Eae33	Experimental allergic encephalomyelitis QTL 33	5.2	0.0001	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	17	50909099	86022412	Rat
1354588	Bvd4	Brain ventricular dilatation QTL 4	5.31	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	17	53498828	82479847	Rat
2302365	Gluco40	Glucose level QTL 40	4.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	57246843	82046127	Rat
2317045	Aia11	Adjuvant induced arthritis QTL 11	4.06		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	17	60781426	86533673	Rat
7411577	Bw141	Body weight QTL 141		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	17	62619516	86533673	Rat
12904736	Cm121	Cardiac mass QTL 121		0.043	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	71774621	82479847	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium										5	7
Low	1		1		11				58	10	17	11
Below cutoff	2	22	44	29	8	29	7	9	16	20	17		7

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001287020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000075188 ⟹ ENSRNOP00000065974

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	17	81,832,518 - 81,917,531 (+)	Ensembl
Rnor_6.0 Ensembl	17	85,914,410 - 86,009,396 (+)	Ensembl

RefSeq Acc Id:

NM_001287020 ⟹ NP_001273949

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,741,067 - 86,825,899 (+)	NCBI
mRatBN7.2	17	81,832,695 - 81,917,531 (+)	NCBI
Rnor_6.0	17	85,914,587 - 86,009,403 (+)	NCBI
Celera	17	81,103,766 - 81,187,813 (+)	NCBI

Sequence:

show sequence

ACGTGTAAGGAGCCACTGCTTAGGGACTTGACTCCGCGCAGGATGGGTAAAAAAATAAAGAAGG
AAGTTGAACCTCCCCCGAAGGATGTGTTTGACCCACTCACAATTGAAAGCAAAAAGGCGGCCAC
TGTGGTGCTGATGCTCAAATCTCCGGAGGAAGACATCTTAGCCAAAGCCTGTGAGGCCATCTAT
AAGTTTGCTTTGAAAGGTGAGGAGAATAAAGCAACTCTCCTTGAACTTGGAGCTGTGGAACCTT
TGACCAAACTGCTCACCCACGAAGACAAAATTGTAAGAAGAAACGCCATGATGATCTTTGGTAT
TCTGGCTTCTAACAGTGATGTTAAAAAGCTACTGAGAGAGTTAGAAGTTATGAGTTCTGTGATT
GCTCAGCTCTCCCCAGAAGAGGAAGTGGTCATCCATGAGTTTGCTAGTCTTTGTCTCGCGAACA
TGTCCGTGGAGTACACGGGGAAAGTACAGATATTTGAGCACGGCGGACTGGAGCCACTTATCAG
ACTGCTGAGCAGCCCAGACCCGGATGTGAAGAAGAATTCTATCGAATGCATCTACAACTTGGTA
CAGGATTTTCAGTGTCGGACTACACTTCAAGAGCTAAATGCCATCCCTCCGATATTAGAGCTGT
TGAAGTCAGAGTACCCCATTATCCAGCTGCTGGCTCTCAAAACCCTGGGTGTCATCACGTGTGA
TAAGGAGGCTCGGACGACACTGAAGGACAATCAAGGGCTGGACCACCTCACTAAGATCCTGGAG
ACCAAGGAACTGAACGACCTGCATGTAGAAGCACTCGCAGTGATAGCCAACTGTCTGGAGGATA
TGGACACAATGGTGTTGATGCAGCAGTCAGGGAGCCTCAAAAAAGTCCTGTCCTTCGCAGAGAA
CTCCACAATTCCTGACATCCAGAAGAACGCGGCCAAAGCTATCACCAAGGCAGCTTATGACCCT
GAAAATAGAAAAGTTTTTCACGAACAAGAGGTTGAAAAATGCCTGGTGACCCTCCTGGGATCTG
ACAGTGATGGGACCAAGATTGCGGCTTCCCAAGCTATTTCAGCCATGTGTGAGAACTTGAGCTG
TAAAGAATTTTTCAACACCCAAGGGATTCCACAGATAGTTCAGTTGCTCAAAAGTGACAATGAG
GAGGTGAGGGAAGCCGCTGCACTGGCCCTGGCAAACCTGACTACCAGCAGCCCGGCAAATGCCA
ATGCTGCTGCAGAAGCAGATGCCATTGACCCGCTGATAAACATCCTGTCGAGCAAGCGGGATGG
AGCCGTTGCCAATGCTGCCACGGTGCTGACCAACATGGCCATACAGGAGCCTCTGCGAGCTATC
ATCCAGAACCACGAAATAATGCGCGCACTGCTGGGCCCGCTGCACTCCACCAACACTGTGGTGC
AGAGCACCGCGGCGCTCACTGTGGCTGCCACTGCCTGCGACGTGGAGTCCCGCAACGAGTTGAA
GAACTGCGGCGGCCTGGAGCCCCTGATTGAGCTCCTGCACTCCAAGAACGACGAGGTCCGAAGG
CACGCCAGCTGGGCTATAATGGTCTGTGCCGGTGACGAGCTGATGGCCGTTGAGCTATGCAGGC
TCGGGGCCCTAGATATCCTTGAAGAAATTAATCGATCATTAAGTCGGAAAAATAAATTTAGCGA
GGCAGCCTATAACAAATTACTCAACAACAATCTTTCTCTGAAATATAGCCAGACTGGCTACTTG
TCATCAAGCAACATAATTAGCGATGGATTCTATGATTACGGTCGGATAAATCCTGGCACCAAGC
TTTTGCCACTGAAGGAACTGTGCTTACAGGAGCTGAATGATCAACGTGCTATTCTCCTAGTCAA
CAATAAATCTGATATCTCCCCACCTCCGTCTATGGAGGATAAATCGTCGGACGTTGGCTATGGA
CGAAGCATTTCTTCTTCATCTTCCTTAAGAAGGGCAAGCAAGGAGAAGGCCAATGCTGGATTTG
GATCTCCCACAGAAGAAAAATCAGAGCCGGCATCAGGACGAAACACGGTCCTTAGTAGAGGTGC
CACCAAAGAGAAAGGGGCAAGGAAAGGGAAAGGGAAAAAAGAAGAGGAGAAAGTGAAAGAGGAA
GAAGAGGTCCTGGCAGTGCCCAAGCTCACGGAAAGCCCTGAGAAAGAGTGGTACCCTCCTCCTG
ACCCTGAGTTCTGTTTGTATGTCCTGGAGGTGATCAAGACAATACTGCCTATCGTCAACATTAA
GGAACAGATTGAGGTTCTTGCCAAGTTTGTGGCAGATAAAATGGGCGGTAAGATTGCAAAAGAG
AAGCTAGCTGATTTCAGCTGGGAACTTCACATAAGTGAGTTGAAATTTCAACTGAAATCCAATG
TCATACCAATTGGATACATCAAGAAGGGGATCTTTTATCACCGAGCACTGCTTTTCAAGGCACT
GGCTGATAAAATCGGGGTTGGCTGCAGCCTGGTGCGTGGTGAGTACAGCCGAGGGTGGAACGAG
GTGAAGCTGGTGAACGAGGCTCGGAAGGGCATTATCGGGAACCTTCCCCCACCAGACGAGTACA
TCGTGGACCTCATGTTCCACCCGGGGACCCTGCTGAAGCTACGCAGCAAAGAGGCCGACCTCTA
CCGCTTTCTGTAGTCGTCAGAGGAACACAAAAGCACCCAAACCAGAGATTGTCCTCCTGTGTTC
TTTAAGGGGGCTTTAGCCGTTTAGATAACTTCAAATAAAAGTATTAGAAATGGTTCTTGTGTAG
AAA

hide sequence

RefSeq Acc Id:

XM_017600428 ⟹ XP_017455917

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,740,999 - 86,825,899 (+)	NCBI
mRatBN7.2	17	81,832,628 - 81,917,534 (+)	NCBI
Rnor_6.0	17	85,914,525 - 86,009,403 (+)	NCBI

Sequence:

show sequence

CAGCCCAGCGTCGCCTAGCAACAAGCATCAACACTGATCCTCAGAGGCCAGTGCAGTTTGTCAC
GTGTAAGGAGCCACTGCTTAGGGACTTGACTCCGCGCAGGATGGGTAAAAAAATAAAGAAGGAA
GTTGAACCTCCCCCGAAGGATGTGTTTGACCCACTCACAATTGAAAGCAAAAAGGCGGCCACTG
TGGTGCTGATGCTCAAATCTCCGGAGGAAGACATCTTAGCCAAAGCCTGTGAGGCCATCTATAA
GTTTGCTTTGAAAGGTGAGGAGAATAAAGCAACTCTCCTTGAACTTGGAGCTGTGGAACCTTTG
ACCAAACTGCTCACCCACGAAGACAAAATTGTAAGAAGAAACGCCATGATGATCTTTGGTATTC
TGGCTTCTAACAGTGATGTTAAAAAGCTACTGAGAGAGTTAGAAGTTATGAGTTCTGTGATTGC
TCAGCTCTCCCCAGAAGAGGAAGTGGTCATCCATGAGTTTGCTAGTCTTTGTCTCGCGAACATG
TCCGTGGAGTACACGGGGAAAGTACAGATATTTGAGCACGGCGGACTGGAGCCACTTATCAGAC
TGCTGAGCAGCCCAGACCCGGATGTGAAGAAGAATTCTATCGAATGCATCTACAACTTGGTACA
GGATTTTCAGTGTCGGACTACACTTCAAGAGCTAAATGCCATCCCTCCGATATTAGAGCTGTTG
AAGTCAGAGTACCCCATTATCCAGCTGCTGGCTCTCAAAACCCTGGGTGTCATCACGTGTGATA
AGGAGGCTCGGACGACACTGAAGGACAATCAAGGGCTGGACCACCTCACTAAGATCCTGGAGAC
CAAGGAACTGAACGACCTGCATGTAGAAGCACTCGCAGTGATAGCCAACTGTCTGGAGGATATG
GACACAATGGTGTTGATGCAGCAGTCAGGGAGCCTCAAAAAAGTCCTGTCCTTCGCAGAGAACT
CCACAATTCCTGACATCCAGAAGAACGCGGCCAAAGCTATCACCAAGGCAGCTTATGACCCTGA
AAATAGAAAAGTTTTTCACGAACAAGAGGTTGAAAAATGCCTGGTGACCCTCCTGGGATCTGAC
AGTGATGGGACCAAGATTGCGGCTTCCCAAGCTATTTCAGCCATGTGTGAGAACTTGAGCTGTA
AAGAATTTTTCAACACCCAAGGGATTCCACAGATAGTTCAGTTGCTCAAAAGTGACAATGAGGA
GGTGAGGGAAGCCGCTGCACTGGCCCTGGCAAACCTGACTACCAGCAGCCCGGCAAATGCCAAT
GCTGCTGCAGAAGCAGATGCCATTGACCCGCTGATAAACATCCTGTCGAGCAAGCGGGATGGAG
CCGTTGCCAATGCTGCCACGGTGCTGACCAACATGGCCATACAGGAGCCTCTGCGAGCTATCAT
CCAGAACCACGAAATAATGCGCGCACTGCTGGGCCCGCTGCACTCCACCAACACTGTGGTGCAG
AGCACCGCGGCGCTCACTGTGGCTGCCACTGCCTGCGACGTGGAGTCCCGCAACGAGTTGAAGA
ACTGCGGCGGCCTGGAGCCCCTGATTGAGCTCCTGCACTCCAAGAACGACGAGGTCCGAAGGCA
CGCCAGCTGGGCTATAATGGTCTGTGCCGGTGACGAGCTGATGGCCGTTGAGCTATGCAGGCTC
GGGGCCCTAGATATCCTTGAAGAAATTAATCGATCATTAAGTCGGAAAAATAAATTTAGCGAGG
CAGCCTATAACAAATTACTCAACAACAATCTTTCTCTGAAATATAGCCAGACTGGCTACTTGTC
ATCAAGCAACATAATTAGCGATGGATTCTATGATTACGGTCGGATAAATCCTGGCACCAAGCTT
TTGCCACTGAAGGAACTGTGCTTACAGGAGCTGAATGATCAACGTGCTATTCTCCTAGTCAACA
ATAAATCTGATATCTCCCCACCTCCGTCTATGGAGGATAAATCGTCGGACGTTGGCTATGGACG
AAGCATTTCTTCTTCATCTTCCTTAAGAAGGGCAAGCAAGGAGAAGGCCAATTTTCGTTTTAGT
GCTGGATTTGGATCTCCCACAGAAGAAAAATCAGAGCCGGCATCAGGACGAAACACGGTCCTTA
GTAGAGGTGCCACCAAAGAGAAAGGGGCAAGGAAAGGGAAAGGGAAAAAAGAAGAGGAGAAAGT
GAAAGAGGAAGAAGAGGTCCTGGCAGTGCCCAAGCTCACGGAAAGCCCTGAGAAAGAGTGGTAC
CCTCCTCCTGACCCTGAGTTCTGTTTGTATGTCCTGGAGGTGATCAAGACAATACTGCCTATCG
TCAACATTAAGGAACAGATTGAGGTTCTTGCCAAGTTTGTGGCAGATAAAATGGGCGGTAAGAT
TGCAAAAGAGAAGCTAGCTGATTTCAGCTGGGAACTTCACATAAGTGAGTTGAAATTTCAACTG
AAATCCAATGTCATACCAATTGGATACATCAAGAAGGGGATCTTTTATCACCGAGCACTGCTTT
TCAAGGCACTGGCTGATAAAATCGGGGTTGGCTGCAGCCTGGTGCGTGGTGAGTACAGCCGAGG
GTGGAACGAGGTGAAGCTGGTGAACGAGGCTCGGAAGGGCATTATCGGGAACCTTCCCCCACCA
GACGAGTACATCGTGGACCTCATGTTCCACCCGGGGACCCTGCTGAAGCTACGCAGCAAAGAGG
CCGACCTCTACCGCTTTCTGTAGTCGTCAGAGGAACACAAAAGCACCCAAACCAGAGATTGTCC
TCCTGTGTTCTTTAAGGGGGCTTTAGCCGTTTAGATAACTTCAAATAAAAGTATTAGAAATGGT
TCTTGTGTAGAAA

hide sequence

RefSeq Acc Id:

XM_017600429 ⟹ XP_017455918

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,722,436 - 86,825,899 (+)	NCBI
mRatBN7.2	17	81,814,087 - 81,917,413 (+)	NCBI
Rnor_6.0	17	85,895,841 - 86,009,403 (+)	NCBI

Sequence:

show sequence

TGTTGTACATTAGTTCTACTTCTGTGTACATATCCAGAGGAATTGAAAACTGTATGTTGCAGAT
ATTCCCACACTCCCACGCTCATTGTGATCTTAAGAACTCATCAGGGTGTGGAATGAGAATCGGA
AAGGAATAAGGATGGGTAAAAAAATAAAGAAGGAAGTTGAACCTCCCCCGAAGGATGTGTTTGA
CCCACTCACAATTGAAAGCAAAAAGGCGGCCACTGTGGTGCTGATGCTCAAATCTCCGGAGGAA
GACATCTTAGCCAAAGCCTGTGAGGCCATCTATAAGTTTGCTTTGAAAGGTGAGGAGAATAAAG
CAACTCTCCTTGAACTTGGAGCTGTGGAACCTTTGACCAAACTGCTCACCCACGAAGACAAAAT
TGTAAGAAGAAACGCCATGATGATCTTTGGTATTCTGGCTTCTAACAGTGATGTTAAAAAGCTA
CTGAGAGAGTTAGAAGTTATGAGTTCTGTGATTGCTCAGCTCTCCCCAGAAGAGGAAGTGGTCA
TCCATGAGTTTGCTAGTCTTTGTCTCGCGAACATGTCCGTGGAGTACACGGGGAAAGTACAGAT
ATTTGAGCACGGCGGACTGGAGCCACTTATCAGACTGCTGAGCAGCCCAGACCCGGATGTGAAG
AAGAATTCTATCGAATGCATCTACAACTTGGTACAGGATTTTCAGTGTCGGACTACACTTCAAG
AGCTAAATGCCATCCCTCCGATATTAGAGCTGTTGAAGTCAGAGTACCCCATTATCCAGCTGCT
GGCTCTCAAAACCCTGGGTGTCATCACGTGTGATAAGGAGGCTCGGACGACACTGAAGGACAAT
CAAGGGCTGGACCACCTCACTAAGATCCTGGAGACCAAGGAACTGAACGACCTGCATGTAGAAG
CACTCGCAGTGATAGCCAACTGTCTGGAGGATATGGACACAATGGTGTTGATGCAGCAGTCAGG
GAGCCTCAAAAAAGTCCTGTCCTTCGCAGAGAACTCCACAATTCCTGACATCCAGAAGAACGCG
GCCAAAGCTATCACCAAGGCAGCTTATGACCCTGAAAATAGAAAAGTTTTTCACGAACAAGAGG
TTGAAAAATGCCTGGTGACCCTCCTGGGATCTGACAGTGATGGGACCAAGATTGCGGCTTCCCA
AGCTATTTCAGCCATGTGTGAGAACTTGAGCTGTAAAGAATTTTTCAACACCCAAGGGATTCCA
CAGATAGTTCAGTTGCTCAAAAGTGACAATGAGGAGGTGAGGGAAGCCGCTGCACTGGCCCTGG
CAAACCTGACTACCAGCAGCCCGGCAAATGCCAATGCTGCTGCAGAAGCAGATGCCATTGACCC
GCTGATAAACATCCTGTCGAGCAAGCGGGATGGAGCCGTTGCCAATGCTGCCACGGTGCTGACC
AACATGGCCATACAGGAGCCTCTGCGAGCTATCATCCAGAACCACGAAATAATGCGCGCACTGC
TGGGCCCGCTGCACTCCACCAACACTGTGGTGCAGAGCACCGCGGCGCTCACTGTGGCTGCCAC
TGCCTGCGACGTGGAGTCCCGCAACGAGTTGAAGAACTGCGGCGGCCTGGAGCCCCTGATTGAG
CTCCTGCACTCCAAGAACGACGAGGTCCGAAGGCACGCCAGCTGGGCTATAATGGTCTGTGCCG
GTGACGAGCTGATGGCCGTTGAGCTATGCAGGCTCGGGGCCCTAGATATCCTTGAAGAAATTAA
TCGATCATTAAGTCGGAAAAATAAATTTAGCGAGGCAGCCTATAACAAATTACTCAACAACAAT
CTTTCTCTGAAATATAGCCAGACTGGCTACTTGTCATCAAGCAACATAATTAGCGATGGATTCT
ATGATTACGGTCGGATAAATCCTGGCACCAAGCTTTTGCCACTGAAGGAACTGTGCTTACAGGA
GCTGAATGATCAACGTGCTATTCTCCTAGTCAACAATAAATCTGATATCTCCCCACCTCCGTCT
ATGGAGGATAAATCGTCGGACGTTGGCTATGGACGAAGCATTTCTTCTTCATCTTCCTTAAGAA
GGGCAAGCAAGGAGAAGGCCAATTTTCGTTTTAGTGCTGGATTTGGATCTCCCACAGAAGAAAA
ATCAGAGCCGGCATCAGGACGAAACACGGTCCTTAGTAGAGGTGCCACCAAAGAGAAAGGGGCA
AGGAAAGGGAAAGGGAAAAAAGAAGAGGAGAAAGTGAAAGAGGAAGAAGAGGTCCTGGCAGTGC
CCAAGCTCACGGAAAGCCCTGAGAAAGAGTGGTACCCTCCTCCTGACCCTGAGTTCTGTTTGTA
TGTCCTGGAGGTGATCAAGACAATACTGCCTATCGTCAACATTAAGGAACAGATTGAGGTTCTT
GCCAAGTTTGTGGCAGATAAAATGGGCGGTAAGATTGCAAAAGAGAAGCTAGCTGATTTCAGCT
GGGAACTTCACATAAGTGAGTTGAAATTTCAACTGAAATCCAATGTCATACCAATTGGATACAT
CAAGAAGGGGATCTTTTATCACCGAGCACTGCTTTTCAAGGCACTGGCTGATAAAATCGGGGTT
GGCTGCAGCCTGGTGCGTGGTGAGTACAGCCGAGGGTGGAACGAGGTGAAGCTGGTGAACGAGG
CTCGGAAGGGCATTATCGGGAACCTTCCCCCACCAGACGAGTACATCGTGGACCTCATGTTCCA
CCCGGGGACCCTGCTGAAGCTACGCAGCAAAGAGGCCGACCTCTACCGCTTTCTGTAGTCGTCA
GAGGAACACAAAAGCACCCAAACCAGAGATTGTCCTCCTGTGTTCTTTAAGGGGGCTTTAGCCG
TTTAGATAACTTCAAATAAAAGTATTAGAAATGGTTCTTGTGTAGAAA

hide sequence

RefSeq Acc Id:

XM_017600430 ⟹ XP_017455919

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,740,999 - 86,825,899 (+)	NCBI
mRatBN7.2	17	81,832,628 - 81,917,531 (+)	NCBI
Rnor_6.0	17	85,914,524 - 86,009,399 (+)	NCBI

Sequence:

show sequence

GCAGCCCAGCGTCGCCTAGCAACAAGCATCAACACTGATCCTCAGAGGCCAGTGCAGTTTGTCA
CGTGTAAGGAGCCACTGCTTAGGGACTTGACTCCGCGCAGGATGGGTAAAAAAATAAAGAAGGA
AGTTGAACCTCCCCCGAAGGATGTGTTTGACCCACTCACAATTGAAAGCAAAAAGGCGGCCACT
GTGGTGCTGATGCTCAAATCTCCGGAGGAAGACATCTTAGCCAAAGCCTGTGAGGCCATCTATA
AGTTTGCTTTGAAAGGTGAGGAGAATAAAGCAACTCTCCTTGAACTTGGAGCTGTGGAACCTTT
GACCAAACTGCTCACCCACGAAGACAAAATTGTAAGAAGAAACGCCATGATGATCTTTGGTATT
CTGGCTTCTAACAGTGATGTTAAAAAGCTACTGAGAGAGTTAGAAGTTATGAGTTCTGTGATTG
CTCAGCTCTCCCCAGAAGAGGAAGTGGTCATCCATGAGTTTGCTAGTCTTTGTCTCGCGAACAT
GTCCGTGGAGTACACGGGGAAAGTACAGATATTTGAGCACGGCGGACTGGAGCCACTTATCAGA
CTGCTGAGCAGCCCAGACCCGGATGTGAAGAAGAATTCTATCGAATGCATCTACAACTTGGTAC
AGGATTTTCAGTGTCGGACTACACTTCAAGAGCTAAATGCCATCCCTCCGATATTAGAGCTGTT
GAAGTCAGAGTACCCCATTATCCAGCTGCTGGCTCTCAAAACCCTGGGTGTCATCACGTGTGAT
AAGGAGGCTCGGACGACACTGAAGGACAATCAAGGGCTGGACCACCTCACTAAGATCCTGGAGA
CCAAGGAACTGAACGACCTGCATGTAGAAGCACTCGCAGTGATAGCCAACTGTCTGGAGGATAT
GGACACAATGGTGTTGATGCAGCAGTCAGGGAGCCTCAAAAAAGTCCTGTCCTTCGCAGAGAAC
TCCACAATTCCTGACATCCAGAAGAACGCGGCCAAAGCTATCACCAAGGCAGCTTATGACCCTG
AAAATAGAAAAGTTTTTCACGAACAAGAGGTTGAAAAATGCCTGGTGACCCTCCTGGGATCTGA
CAGTGATGGGACCAAGATTGCGGCTTCCCAAGCTATTTCAGCCATGTGTGAGAACTTGAGCTGT
AAAGAATTTTTCAACACCCAAGGGATTCCACAGATAGTTCAGTTGCTCAAAAGTGACAATGAGG
AGGTGAGGGAAGCCGCTGCACTGGCCCTGGCAAACCTGACTACCAGCAGCCCGGCAAATGCCAA
TGCTGCTGCAGAAGCAGATGCCATTGACCCGCTGATAAACATCCTGTCGAGCAAGCGGGATGGA
GCCGTTGCCAATGCTGCCACGGTGCTGACCAACATGGCCATACAGGAGCCTCTGCGAGCTATCA
TCCAGAACCACGAAATAATGCGCGCACTGCTGGGCCCGCTGCACTCCACCAACACTGTGGTGCA
GAGCACCGCGGCGCTCACTGTGGCTGCCACTGCCTGCGACGTGGAGTCCCGCAACGAGTTGAAG
AACTGCGGCGGCCTGGAGCCCCTGATTGAGCTCCTGCACTCCAAGAACGACGAGGTCCGAAGGC
ACGCCAGCTGGGCTATAATGGTCTGTGCCGGTGACGAGCTGATGGCCGTTGAGCTATGCAGGCT
CGGGGCCCTAGATATCCTTGAAGAAATTAATCGATCATTAAGTCGGAAAAATAAATTTAGCGAG
GCAGCCTATAACAAATTACTCAACAACAATCTTTCTCTGAAATATAGCCAGACTGGCTACTTGT
CATCAAGCAACATAATTAGCGATGGATTCTATGATTACGGTCGGATAAATCCTGGCACCAAGCT
TTTGCCACTGAAGGAACTGTGCTTACAGGAGCTGAATGATCAACGTGCTATTCTCCTAGTCAAC
AATAAATCTGATATCTCCCCACCTCCGTCTATGGAGGATAAATCGTCGGACGTTGGCTATGGAC
GAAGCATTTCTTCTTCATCTTCCTTAAGAAGGGCAAGCAAGGAGAAGGCCAATTTTCGTTTTAG
TGCTGGATTTGGATCTCCCACAGAAGAAAAATCAGAGCCGGCATCAGGACGAAACACGGTCCTT
AGTAGAGGTGCCACCAAAGAGAAAGGGGCAAGGAAAGGGAAAGGGAAAAAAGAAGAGGAGAAAG
TGAAAGAGGAAGAAGAGGTCCTGGCAGTGCCCAAGCTCACGGAAAGCCCTGAGAAAGAGTGGTA
CCCTCCTCCTGACCCTGAGTTCTGTTTGTATGTCCTGGAGGTGATCAAGACAATACTGCCTATC
GTCAACATTAAGGAACAGATTGAGGTTCTTGCCAAGCACTGGCTGATAAAATCGGGGTTGGCTG
CAGCCTGGTGCGTGGTGAGTACAGCCGAGGGTGGAACGAGGTGAAGCTGGTGAACGAGGCTCGG
AAGGGCATTATCGGGAACCTTCCCCCACCAGACGAGTACATCGTGGACCTCATGTTCCACCCGG
GGACCCTGCTGAAGCTACGCAGCAAAGAGGCCGACCTCTACCGCTTTCTGTAGTCGTCAGAGGA
ACACAAAAGCACCCAAACCAGAGATTGTCCTCCTGTGTTCTTTAAGGGGGCTTTAGCCGTTTAG
ATAACTTCAAATAAAAGTATTAGAAATGGTTCTTGTGTA

hide sequence

RefSeq Acc Id:

XM_017600431 ⟹ XP_017455920

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,740,999 - 86,825,899 (+)	NCBI
mRatBN7.2	17	81,832,628 - 81,917,531 (+)	NCBI
Rnor_6.0	17	85,914,524 - 86,009,399 (+)	NCBI

Sequence:

show sequence

GCAGCCCAGCGTCGCCTAGCAACAAGCATCAACACTGATCCTCAGAGGCCAGTGCAGTTTGTCA
CGTGTAAGGAGCCACTGCTTAGGGACTTGACTCCGCGCAGGATGGGTAAAAAAATAAAGAAGGA
AGTTGAACCTCCCCCGAAGGATGTGTTTGACCCACTCACAATTGAAAGCAAAAAGGCGGCCACT
GTGGTGCTGATGCTCAAATCTCCGGAGGAAGACATCTTAGCCAAAGCCTGTGAGGCCATCTATA
AGTTTGCTTTGAAAGGTGAGGAGAATAAAGCAACTCTCCTTGAACTTGGAGCTGTGGAACCTTT
GACCAAACTGCTCACCCACGAAGACAAAATTGTAAGAAGAAACGCCATGATGATCTTTGGTATT
CTGGCTTCTAACAGTGATGTTAAAAAGCTACTGAGAGAGTTAGAAGTTATGAGTTCTGTGATTG
CTCAGCTCTCCCCAGAAGAGGAAGTGGTCATCCATGAGTTTGCTAGTCTTTGTCTCGCGAACAT
GTCCGTGGAGTACACGGGGAAAGTACAGATATTTGAGCACGGCGGACTGGAGCCACTTATCAGA
CTGCTGAGCAGCCCAGACCCGGATGTGAAGAAGAATTCTATCGAATGCATCTACAACTTGGTAC
AGGATTTTCAGTGTCGGACTACACTTCAAGAGCTAAATGCCATCCCTCCGATATTAGAGCTGTT
GAAGTCAGAGTACCCCATTATCCAGCTGCTGGCTCTCAAAACCCTGGGTGTCATCACGTGTGAT
AAGGAGGCTCGGACGACACTGAAGGACAATCAAGGGCTGGACCACCTCACTAAGATCCTGGAGA
CCAAGGAACTGAACGACCTGCATGTAGAAGCACTCGCAGTGATAGCCAACTGTCTGGAGGATAT
GGACACAATGGTGTTGATGCAGCAGTCAGGGAGCCTCAAAAAAGTCCTGTCCTTCGCAGAGAAC
TCCACAATTCCTGACATCCAGAAGAACGCGGCCAAAGCTATCACCAAGGCAGCTTATGACCCTG
AAAATAGAAAAGTTTTTCACGAACAAGAGGTTGAAAAATGCCTGGTGACCCTCCTGGGATCTGA
CAGTGATGGGACCAAGATTGCGGCTTCCCAAGCTATTTCAGCCATGTGTGAGAACTTGAGCTGT
AAAGAATTTTTCAACACCCAAGGGATTCCACAGATAGTTCAGTTGCTCAAAAGTGACAATGAGG
AGGTGAGGGAAGCCGCTGCACTGGCCCTGGCAAACCTGACTACCAGCAGCCCGGCAAATGCCAA
TGCTGCTGCAGAAGCAGATGCCATTGACCCGCTGATAAACATCCTGTCGAGCAAGCGGGATGGA
GCCGTTGCCAATGCTGCCACGGTGCTGACCAACATGGCCATACAGGAGCCTCTGCGAGCTATCA
TCCAGAACCACGAAATAATGCGCGCACTGCTGGGCCCGCTGCACTCCACCAACACTGTGGTGCA
GAGCACCGCGGCGCTCACTGTGGCTGCCACTGCCTGCGACGTGGAGTCCCGCAACGAGTTGAAG
AACTGCGGCGGCCTGGAGCCCCTGATTGAGCTCCTGCACTCCAAGAACGACGAGGTCCGAAGGC
ACGCCAGCTGGGCTATAATGGTCTGTGCCGGTGACGAGCTGATGGCCGTTGAGCTATGCAGGCT
CGGGGCCCTAGATATCCTTGAAGAAATTAATCGATCATTAAGTCGGAAAAATAAATTTAGCGAG
GCAGCCTATAACAAATTACTCAACAACAATCTTTCTCTGAAATATAGCCAGACTGGCTACTTGT
CATCAAGCAACATAATTAGCGATGGATTCTATGATTACGGTCGGATAAATCCTGGCACCAAGCT
TTTGCCACTGAAGGAACTGTGCTTACAGGAGCTGAATGATCAACGTGCTATTCTCCTAGTCAAC
AATAAATCTGATATCTCCCCACCTCCGTCTATGGAGGATAAATCGTCGGACGTTGGCTATGGAC
GAAGCATTTCTTCTTCATCTTCCTTAAGAAGGGCAAGCAAGGAGAAGGCCAATTTTCGTTTTAG
TGCTGGATTTGGATCTCCCACAGAAGAAAAATCAGAGCCGGCATCAGGACGAAACACGGTCCTT
AGTAGAGGTGCCACCAAAGAGAAAGGGGCAAGGCACTGGCTGATAAAATCGGGGTTGGCTGCAG
CCTGGTGCGTGGTGAGTACAGCCGAGGGTGGAACGAGGTGAAGCTGGTGAACGAGGCTCGGAAG
GGCATTATCGGGAACCTTCCCCCACCAGACGAGTACATCGTGGACCTCATGTTCCACCCGGGGA
CCCTGCTGAAGCTACGCAGCAAAGAGGCCGACCTCTACCGCTTTCTGTAGTCGTCAGAGGAACA
CAAAAGCACCCAAACCAGAGATTGTCCTCCTGTGTTCTTTAAGGGGGCTTTAGCCGTTTAGATA
ACTTCAAATAAAAGTATTAGAAATGGTTCTTGTGTA

hide sequence

RefSeq Acc Id:

XM_039095275 ⟹ XP_038951203

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,740,999 - 86,825,899 (+)	NCBI
mRatBN7.2	17	81,832,628 - 81,917,531 (+)	NCBI

RefSeq Acc Id:

XM_063276004 ⟹ XP_063132074

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,740,999 - 86,825,899 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001273949	(Get FASTA)	NCBI Sequence Viewer
	XP_017455917	(Get FASTA)	NCBI Sequence Viewer
	XP_017455918	(Get FASTA)	NCBI Sequence Viewer
	XP_017455919	(Get FASTA)	NCBI Sequence Viewer
	XP_017455920	(Get FASTA)	NCBI Sequence Viewer
	XP_038951203	(Get FASTA)	NCBI Sequence Viewer
	XP_063132074	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL78776	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000065974
	ENSRNOP00000065974.3

RefSeq Acc Id:

NP_001273949 ⟸ NM_001287020

- UniProtKB:

M0R914 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGKKIKKEVEPPPKDVFDPLTIESKKAATVVLMLKSPEEDILAKACEAIYKFALKGEENKATLL
ELGAVEPLTKLLTHEDKIVRRNAMMIFGILASNSDVKKLLRELEVMSSVIAQLSPEEEVVIHEF
ASLCLANMSVEYTGKVQIFEHGGLEPLIRLLSSPDPDVKKNSIECIYNLVQDFQCRTTLQELNA
IPPILELLKSEYPIIQLLALKTLGVITCDKEARTTLKDNQGLDHLTKILETKELNDLHVEALAV
IANCLEDMDTMVLMQQSGSLKKVLSFAENSTIPDIQKNAAKAITKAAYDPENRKVFHEQEVEKC
LVTLLGSDSDGTKIAASQAISAMCENLSCKEFFNTQGIPQIVQLLKSDNEEVREAAALALANLT
TSSPANANAAAEADAIDPLINILSSKRDGAVANAATVLTNMAIQEPLRAIIQNHEIMRALLGPL
HSTNTVVQSTAALTVAATACDVESRNELKNCGGLEPLIELLHSKNDEVRRHASWAIMVCAGDEL
MAVELCRLGALDILEEINRSLSRKNKFSEAAYNKLLNNNLSLKYSQTGYLSSSNIISDGFYDYG
RINPGTKLLPLKELCLQELNDQRAILLVNNKSDISPPPSMEDKSSDVGYGRSISSSSSLRRASK
EKANAGFGSPTEEKSEPASGRNTVLSRGATKEKGARKGKGKKEEEKVKEEEEVLAVPKLTESPE
KEWYPPPDPEFCLYVLEVIKTILPIVNIKEQIEVLAKFVADKMGGKIAKEKLADFSWELHISEL
KFQLKSNVIPIGYIKKGIFYHRALLFKALADKIGVGCSLVRGEYSRGWNEVKLVNEARKGIIGN
LPPPDEYIVDLMFHPGTLLKLRSKEADLYRFL

hide sequence

RefSeq Acc Id:	XP_017455918 ⟸ XM_017600429
- Peptide Label:	isoform X1
- UniProtKB:	M0R914 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKKIKKEVEPPPKDVFDPLTIESKKAATVVLMLKSPEEDILAKACEAIYKFALKGEENKATLL ELGAVEPLTKLLTHEDKIVRRNAMMIFGILASNSDVKKLLRELEVMSSVIAQLSPEEEVVIHEF ASLCLANMSVEYTGKVQIFEHGGLEPLIRLLSSPDPDVKKNSIECIYNLVQDFQCRTTLQELNA IPPILELLKSEYPIIQLLALKTLGVITCDKEARTTLKDNQGLDHLTKILETKELNDLHVEALAV IANCLEDMDTMVLMQQSGSLKKVLSFAENSTIPDIQKNAAKAITKAAYDPENRKVFHEQEVEKC LVTLLGSDSDGTKIAASQAISAMCENLSCKEFFNTQGIPQIVQLLKSDNEEVREAAALALANLT TSSPANANAAAEADAIDPLINILSSKRDGAVANAATVLTNMAIQEPLRAIIQNHEIMRALLGPL HSTNTVVQSTAALTVAATACDVESRNELKNCGGLEPLIELLHSKNDEVRRHASWAIMVCAGDEL MAVELCRLGALDILEEINRSLSRKNKFSEAAYNKLLNNNLSLKYSQTGYLSSSNIISDGFYDYG RINPGTKLLPLKELCLQELNDQRAILLVNNKSDISPPPSMEDKSSDVGYGRSISSSSSLRRASK EKANFRFSAGFGSPTEEKSEPASGRNTVLSRGATKEKGARKGKGKKEEEKVKEEEEVLAVPKLT ESPEKEWYPPPDPEFCLYVLEVIKTILPIVNIKEQIEVLAKFVADKMGGKIAKEKLADFSWELH ISELKFQLKSNVIPIGYIKKGIFYHRALLFKALADKIGVGCSLVRGEYSRGWNEVKLVNEARKG IIGNLPPPDEYIVDLMFHPGTLLKLRSKEADLYRFL hide sequence

RefSeq Acc Id:	XP_017455919 ⟸ XM_017600430
- Peptide Label:	isoform X2
- UniProtKB:	M0R914 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKKIKKEVEPPPKDVFDPLTIESKKAATVVLMLKSPEEDILAKACEAIYKFALKGEENKATLL ELGAVEPLTKLLTHEDKIVRRNAMMIFGILASNSDVKKLLRELEVMSSVIAQLSPEEEVVIHEF ASLCLANMSVEYTGKVQIFEHGGLEPLIRLLSSPDPDVKKNSIECIYNLVQDFQCRTTLQELNA IPPILELLKSEYPIIQLLALKTLGVITCDKEARTTLKDNQGLDHLTKILETKELNDLHVEALAV IANCLEDMDTMVLMQQSGSLKKVLSFAENSTIPDIQKNAAKAITKAAYDPENRKVFHEQEVEKC LVTLLGSDSDGTKIAASQAISAMCENLSCKEFFNTQGIPQIVQLLKSDNEEVREAAALALANLT TSSPANANAAAEADAIDPLINILSSKRDGAVANAATVLTNMAIQEPLRAIIQNHEIMRALLGPL HSTNTVVQSTAALTVAATACDVESRNELKNCGGLEPLIELLHSKNDEVRRHASWAIMVCAGDEL MAVELCRLGALDILEEINRSLSRKNKFSEAAYNKLLNNNLSLKYSQTGYLSSSNIISDGFYDYG RINPGTKLLPLKELCLQELNDQRAILLVNNKSDISPPPSMEDKSSDVGYGRSISSSSSLRRASK EKANFRFSAGFGSPTEEKSEPASGRNTVLSRGATKEKGARKGKGKKEEEKVKEEEEVLAVPKLT ESPEKEWYPPPDPEFCLYVLEVIKTILPIVNIKEQIEVLAKHWLIKSGLAAAWCVVSTAEGGTR hide sequence

RefSeq Acc Id:	XP_017455920 ⟸ XM_017600431
- Peptide Label:	isoform X4
- UniProtKB:	A6JM99 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKKIKKEVEPPPKDVFDPLTIESKKAATVVLMLKSPEEDILAKACEAIYKFALKGEENKATLL ELGAVEPLTKLLTHEDKIVRRNAMMIFGILASNSDVKKLLRELEVMSSVIAQLSPEEEVVIHEF ASLCLANMSVEYTGKVQIFEHGGLEPLIRLLSSPDPDVKKNSIECIYNLVQDFQCRTTLQELNA IPPILELLKSEYPIIQLLALKTLGVITCDKEARTTLKDNQGLDHLTKILETKELNDLHVEALAV IANCLEDMDTMVLMQQSGSLKKVLSFAENSTIPDIQKNAAKAITKAAYDPENRKVFHEQEVEKC LVTLLGSDSDGTKIAASQAISAMCENLSCKEFFNTQGIPQIVQLLKSDNEEVREAAALALANLT TSSPANANAAAEADAIDPLINILSSKRDGAVANAATVLTNMAIQEPLRAIIQNHEIMRALLGPL HSTNTVVQSTAALTVAATACDVESRNELKNCGGLEPLIELLHSKNDEVRRHASWAIMVCAGDEL MAVELCRLGALDILEEINRSLSRKNKFSEAAYNKLLNNNLSLKYSQTGYLSSSNIISDGFYDYG RINPGTKLLPLKELCLQELNDQRAILLVNNKSDISPPPSMEDKSSDVGYGRSISSSSSLRRASK EKANFRFSAGFGSPTEEKSEPASGRNTVLSRGATKEKGARHWLIKSGLAAAWCVVSTAEGGTR hide sequence

RefSeq Acc Id:	XP_017455917 ⟸ XM_017600428
- Peptide Label:	isoform X1
- UniProtKB:	M0R914 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKKIKKEVEPPPKDVFDPLTIESKKAATVVLMLKSPEEDILAKACEAIYKFALKGEENKATLL ELGAVEPLTKLLTHEDKIVRRNAMMIFGILASNSDVKKLLRELEVMSSVIAQLSPEEEVVIHEF ASLCLANMSVEYTGKVQIFEHGGLEPLIRLLSSPDPDVKKNSIECIYNLVQDFQCRTTLQELNA IPPILELLKSEYPIIQLLALKTLGVITCDKEARTTLKDNQGLDHLTKILETKELNDLHVEALAV IANCLEDMDTMVLMQQSGSLKKVLSFAENSTIPDIQKNAAKAITKAAYDPENRKVFHEQEVEKC LVTLLGSDSDGTKIAASQAISAMCENLSCKEFFNTQGIPQIVQLLKSDNEEVREAAALALANLT TSSPANANAAAEADAIDPLINILSSKRDGAVANAATVLTNMAIQEPLRAIIQNHEIMRALLGPL HSTNTVVQSTAALTVAATACDVESRNELKNCGGLEPLIELLHSKNDEVRRHASWAIMVCAGDEL MAVELCRLGALDILEEINRSLSRKNKFSEAAYNKLLNNNLSLKYSQTGYLSSSNIISDGFYDYG RINPGTKLLPLKELCLQELNDQRAILLVNNKSDISPPPSMEDKSSDVGYGRSISSSSSLRRASK EKANFRFSAGFGSPTEEKSEPASGRNTVLSRGATKEKGARKGKGKKEEEKVKEEEEVLAVPKLT ESPEKEWYPPPDPEFCLYVLEVIKTILPIVNIKEQIEVLAKFVADKMGGKIAKEKLADFSWELH ISELKFQLKSNVIPIGYIKKGIFYHRALLFKALADKIGVGCSLVRGEYSRGWNEVKLVNEARKG IIGNLPPPDEYIVDLMFHPGTLLKLRSKEADLYRFL hide sequence

RefSeq Acc Id:

ENSRNOP00000065974 ⟸ ENSRNOT00000075188

RefSeq Acc Id:	XP_038951203 ⟸ XM_039095275
- Peptide Label:	isoform X5
- UniProtKB:	A6JM99 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132074 ⟸ XM_063276004
- Peptide Label:	isoform X3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R914-F1-model_v2	AlphaFold	M0R914	1-900	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:2319961	AgrOrtholog
BioCyc Gene	G2FUF-8537	BioCyc
Ensembl Genes	ENSRNOG00000016716	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000075188	ENTREZGENE
	ENSRNOT00000075188.4	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	Armadillo	UniProtKB/TrEMBL
NCBI Gene	100361506	ENTREZGENE
PANTHER	ARMADILLO REPEAT-CONTAINING PROTEIN 3	UniProtKB/TrEMBL
	ARMADILLO REPEAT-CONTAINING PROTEIN 3	UniProtKB/TrEMBL
Pfam	Arm	UniProtKB/TrEMBL
	EDR1	UniProtKB/TrEMBL
	HEAT_2	UniProtKB/TrEMBL
PhenoGen	Armc3	PhenoGen
PROSITE	ARM_REPEAT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000016716	RatGTEx
SMART	ARM	UniProtKB/TrEMBL
Superfamily-SCOP	ARM-type_fold	UniProtKB/TrEMBL
UniProt	A6JM99	ENTREZGENE, UniProtKB/TrEMBL
	M0R914	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-08-13	Armc3	armadillo repeat containing 3	LOC100361506	Armc3 protein-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-05-05	LOC100361506	Armc3 protein-like			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar