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Gene: Atp13a2 (ATPase cation transporting 13A2) Rattus norvegicus
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Symbol: Atp13a2
Name: ATPase cation transporting 13A2
Description: Predicted to have phosphatidic acid binding activity and phosphatidylinositol-3,5-bisphosphate binding activity. Involved in regulation of autophagosome size and regulation of mitochondrion organization. Predicted to localize to several cellular components, including the cytoplasmic vesicle; neuronal cell body; and vacuole. Human ortholog(s) of this gene implicated in Kufor-Rakeb syndrome; Parkinson's disease; and hereditary spastic paraplegia. Orthologous to human ATP13A2 (ATPase cation transporting 13A2); PARTICIPATES IN Parkinson's disease pathway; INTERACTS WITH bisphenol A; C60 fullerene; vinclozolin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATPase 13A2; ATPase type 13A2; LOC362645; MGC188455; probable cation-transporting ATPase 13A2; RGD1307977; similar to RIKEN cDNA 1110012E06
Orthologs:
Homo sapiens (human) : ATP13A2 (ATPase cation transporting 13A2)  HGNC  Alliance
Mus musculus (house mouse) : Atp13a2 (ATPase type 13A2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp13a2 (ATPase cation transporting 13A2)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP13A2 (ATPase cation transporting 13A2)
Canis lupus familiaris (dog) : ATP13A2 (ATPase cation transporting 13A2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp13a2 (ATPase cation transporting 13A2)
Sus scrofa (pig) : ATP13A2 (ATPase cation transporting 13A2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05159,512,208 - 159,531,631 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5159,512,285 - 159,531,637 (+)Ensembl
Rnor_5.05163,224,470 - 163,243,886 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45159,847,016 - 159,866,362 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15159,857,176 - 159,876,542 (+)NCBI
Celera5151,657,698 - 151,677,052 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atp13a2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307977
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.