Gene: Lix1 (limb and CNS expressed 1) Rattus norvegicus
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Symbol: Lix1
Name: limb and CNS expressed 1
Description: ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); INTERACTS WITH 17beta-estradiol; bisphenol A; 17alpha-ethynylestradiol (ortholog)
AGR Description: Predicted to be involved in autophagosome maturation; predicted to localize to the cytoplasm; orthologous to human LIX1 (limb and CNS expressed 1).
Merged Description: Predicted to be involved in autophagosome maturation; predicted to localize to the cytoplasm; orthologous to human LIX1 (limb and CNS expressed 1); INTERACTS WITH 17beta-estradiol; bisphenol A; 17alpha-ethynylestradiol (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: limb expression 1 homolog; limb expression 1 homolog (chicken) ; Lix1 homolog; Lix1 homolog (chicken); LOC292381
Orthologs:
Homo sapiens (human) : LIX1 (limb and CNS expressed 1)  HGNC  Alliance
Mus musculus (house mouse) : Lix1 (limb and CNS expressed 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lix1 (limb and CNS expressed 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LIX1 (limb and CNS expressed 1)
Canis lupus familiaris (dog) : LIX1 (limb and CNS expressed 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lix1 (limb and CNS expressed 1)
Sus scrofa (pig) : LIX1 (limb and CNS expressed 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0159,156,021 - 59,212,878 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0160,083,352 - 60,139,891 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4155,923,097 - 55,980,380 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1155,926,201 - 55,983,315 (+)NCBI
Celera154,323,682 - 54,380,588 (+)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lix1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309454
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.