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Gene: Atg9a (autophagy related 9A) Rattus norvegicus
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Symbol: Atg9a
Name: autophagy related 9A
RGD ID: 1310450
Description: Involved in response to nutrient levels. Localizes to late endosome. Orthologous to human ATG9A (autophagy related 9A); PARTICIPATES IN autophagy pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: APG9-like 1; ATG9 autophagy related 9 homolog A; ATG9 autophagy related 9 homolog A (S. cerevisiae); autophagy-related 9A; autophagy-related 9A (yeast); autophagy-related protein 9A; LOC363254; MGC105908; RGD1310450; similar to hypothetical protein
Orthologs:
Homo sapiens (human) : ATG9A (autophagy related 9A)  HGNC  Alliance
Mus musculus (house mouse) : Atg9a (autophagy related 9A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg9a (autophagy related 9A)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG9A (autophagy related 9A)
Canis lupus familiaris (dog) : ATG9A (autophagy related 9A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg9a (autophagy related 9A)
Sus scrofa (pig) : ATG9A (autophagy related 9A)
Chlorocebus sabaeus (African green monkey) : ATG9A (autophagy related 9A)
Heterocephalus glaber (naked mole-rat) : Atg9a (autophagy related 9A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0982,382,800 - 82,393,429 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl982,382,800 - 82,393,382 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0982,152,061 - 82,162,660 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4974,463,655 - 74,474,286 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1974,610,636 - 74,621,268 (-)NCBI
Celera974,247,853 - 74,258,401 (-)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atg9a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310450
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.