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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:xenophagy
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Accession:GO:0098792 term browser browse the term
Definition:The selective degradation of intracellular pathogen or some part of an intracellular pathogen (e.g. viral capsid) by macroautophagy.



show annotations for term's descendants           Sort by:
xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO
IEA
PR:Q80W47 (PMID:24954904)
GO_REF:0000107
RGD
Ensembl
PMID:24954904 GO_REF:0000107 NCBI chr 9:95,869,839...95,905,354
Ensembl chr 9:95,869,865...95,905,357
JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in ISO (PMID:23022382), (PMID:25771791) RGD PMID:23022382 PMID:25771791 NCBI chr10:81,552,084...81,568,266 JBrowse link
G Lgals8 galectin 8 involved_in ISO
ISS
(PMID:22246324), (PMID:28077878)
GO_REF:0000024
RGD
GO_Central
PMID:22246324 PMID:28077878 GO_REF:0000024 NCBI chr17:62,716,368...62,744,272
Ensembl chr17:62,719,828...62,744,482
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of ISO MGI:1346858 (PMID:22033934) RGD PMID:22033934 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:190,797,185...190,803,411
JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 acts_upstream_of ISO
IEA
MGI:2674231 (PMID:22033934)
GO_REF:0000107
RGD
Ensembl
PMID:22033934 GO_REF:0000107 NCBI chr 4:85,391,142...85,442,281
Ensembl chr 4:85,391,151...85,441,674
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of ISO MGI:3529594 (PMID:22033934) RGD PMID:22033934 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of ISO
IEA
MGI:2660793 (PMID:22033934)
GO_REF:0000107
RGD
Ensembl
PMID:22033934 GO_REF:0000107 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663
JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (PMID:34012115) RGD PMID:34012115 NCBI chr10:105,154,873...105,254,148
Ensembl chr10:105,157,904...105,254,148
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of ISO MGI:2674036 (PMID:22033934) RGD PMID:22033934 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 acts_upstream_of_or_within ISO PR:Q8C0J2 (PMID:24954904) RGD PMID:24954904 NCBI chr12:17,024,876...17,053,306
Ensembl chr12:17,024,878...17,071,406
JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228
JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO
IEA
(PMID:23245322)
GO_REF:0000107
RGD
Ensembl
PMID:23245322 GO_REF:0000107 NCBI chr 3:36,621,042...36,661,932
Ensembl chr 3:36,621,042...36,661,825
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (PMID:22033934) RGD PMID:22033934 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:190,797,185...190,803,411
JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 acts_upstream_of_or_within ISO
IEA
MGI:2674231 (PMID:22033934)
GO_REF:0000107
RGD
Ensembl
PMID:22033934 GO_REF:0000107 NCBI chr 4:85,391,142...85,442,281
Ensembl chr 4:85,391,151...85,441,674
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:3529594 (PMID:22033934) RGD PMID:22033934 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846
JBrowse link
G Optn optineurin involved_in ISO
IEA
(PMID:21617041)
GO_REF:0000107
RGD
Ensembl
PMID:21617041 GO_REF:0000107 NCBI chr17:78,118,847...78,169,543
Ensembl chr17:78,118,866...78,169,543
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO
IEA
MGI:2660793 (PMID:22033934)
GO_REF:0000107
RGD
Ensembl
PMID:22033934 GO_REF:0000107 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663
JBrowse link
G Rnf31 ring finger protein 31 involved_in ISO
IEA
(PMID:28481331)
GO_REF:0000107
RGD
Ensembl
PMID:28481331 GO_REF:0000107 NCBI chr15:33,053,450...33,065,285
Ensembl chr15:33,053,607...33,065,284
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO
IEA
(PMID:21617041)
GO_REF:0000107
RGD
Ensembl
PMID:21617041 GO_REF:0000107 NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:58,963,325...58,996,357
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2674036 (PMID:22033934) RGD PMID:22033934 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    biological process involved in interspecies interaction between organisms 2080
      response to other organism 1961
        defense response to other organism 1213
          xenophagy 15
            negative regulation of xenophagy 0
            positive regulation of xenophagy 10
            regulation of xenophagy + 10
Path 2
Term Annotations click to browse term
  biological_process 20668
    response to stimulus 11201
      response to external stimulus 2885
        response to external biotic stimulus 1965
          response to other organism 1961
            defense response to other organism 1213
              xenophagy 15
                negative regulation of xenophagy 0
                positive regulation of xenophagy 10
                regulation of xenophagy + 10
paths to the root